RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 NOL8Q76FK4 1167 aaKnown RBP13.51□□□□□ -0.25
GGA3-206ENST00000578773 ERMP1Q7Z2K6 904 aa13.51□□□□□ -0.25
GGA3-206ENST00000578773 EDAQ92838 391 aa13.51□□□□□ -0.25
GGA3-206ENST00000578773 ATOH1Q92858 354 aaPredicted RBP13.51□□□□□ -0.25
GGA3-206ENST00000578773 DDX11Q96FC9 970 aa13.51□□□□□ -0.25
GGA3-206ENST00000578773 DYNLL2Q96FJ2 89 aa13.51□□□□□ -0.25
GGA3-206ENST00000578773 NUP88Q99567 741 aaPredicted RBP13.51□□□□□ -0.25
GGA3-206ENST00000578773 ABHD16BQ9H3Z7 469 aa13.51□□□□□ -0.25
GGA3-206ENST00000578773 PDGFCQ9NRA1 345 aa13.51□□□□□ -0.25
GGA3-206ENST00000578773 PPP1R9AQ9ULJ8 1098 aa13.51□□□□□ -0.25
GGA3-206ENST00000578773 AKAP2Q9Y2D5 859 aa13.51□□□□□ -0.25
GGA3-206ENST00000578773 TMX2Q9Y320 296 aa13.51□□□□□ -0.25
GGA3-206ENST00000578773 KIF28PB7ZC32 967 aa13.5□□□□□ -0.25
GGA3-206ENST00000578773 H0Y858 1186 aa13.5□□□□□ -0.25
GGA3-206ENST00000578773 DYNC1LI2O43237 492 aaPredicted RBP13.5□□□□□ -0.25
GGA3-206ENST00000578773 IQCF3P0C7M6 154 aa13.5□□□□□ -0.25
GGA3-206ENST00000578773 LTBRP36941 435 aa13.5□□□□□ -0.25
GGA3-206ENST00000578773 DLX2Q07687 328 aaPredicted RBP13.5□□□□□ -0.25
GGA3-206ENST00000578773 TCEAL5Q5H9L2 206 aa13.5□□□□□ -0.25
GGA3-206ENST00000578773 FAM117BQ6P1L5 589 aa13.5□□□□□ -0.25
GGA3-206ENST00000578773 BMP8AQ7Z5Y6 402 aa13.5□□□□□ -0.25
GGA3-206ENST00000578773 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.5□□□□□ -0.25
GGA3-206ENST00000578773 TGS1Q96RS0 853 aaKnown RBP13.5□□□□□ -0.25
GGA3-206ENST00000578773 TLR9Q9NR96 1032 aa13.5□□□□□ -0.25
GGA3-206ENST00000578773 PTPRCP08575 1304 aa13.49□□□□□ -0.25
GGA3-206ENST00000578773 PRR23AA6NEV1 266 aa13.49□□□□□ -0.25
GGA3-206ENST00000578773 ID4P47928 161 aa13.49□□□□□ -0.25
GGA3-206ENST00000578773 ICA1Q05084 483 aa13.49□□□□□ -0.25
GGA3-206ENST00000578773 TRIM67Q6ZTA4 783 aa13.49□□□□□ -0.25
GGA3-206ENST00000578773 ZNF467Q7Z7K2 595 aaPredicted RBP13.49□□□□□ -0.25
GGA3-206ENST00000578773 TTC6Q86TZ1 520 aa13.49□□□□□ -0.25
GGA3-206ENST00000578773 SSH1Q8WYL5 1049 aa13.49□□□□□ -0.25
GGA3-206ENST00000578773 MEIS3Q99687 375 aa13.49□□□□□ -0.25
GGA3-206ENST00000578773 DBNDD2Q9BQY9 259 aa13.49□□□□□ -0.25
GGA3-206ENST00000578773 PRKAG3Q9UGI9 489 aa13.49□□□□□ -0.25
GGA3-206ENST00000578773 TPRP12270 2363 aaKnown RBP13.48□□□□□ -0.25
GGA3-206ENST00000578773 CABYRO75952 493 aa13.48□□□□□ -0.25
GGA3-206ENST00000578773 UQCRFS1P1P0C7P4 283 aa13.48□□□□□ -0.25
GGA3-206ENST00000578773 PUS10Q3MIT2 529 aaKnown RBP13.48□□□□□ -0.25
GGA3-206ENST00000578773 TMEM179Q6ZVK1 233 aa13.48□□□□□ -0.25
GGA3-206ENST00000578773 MAGEB6Q8N7X4 407 aa13.48□□□□□ -0.25
GGA3-206ENST00000578773 ZBED2Q9BTP6 218 aa13.48□□□□□ -0.25
GGA3-206ENST00000578773 POLR3DP05423 398 aaPredicted RBP13.47□□□□□ -0.25
GGA3-206ENST00000578773 KCNJ6P48051 423 aa13.47□□□□□ -0.25
GGA3-206ENST00000578773 COL19A1Q14993 1142 aa13.47□□□□□ -0.25
GGA3-206ENST00000578773 TTC39AQ5SRH9 613 aa13.47□□□□□ -0.25
GGA3-206ENST00000578773 EEPD1Q7L9B9 569 aa13.47□□□□□ -0.25
GGA3-206ENST00000578773 CPXCR1Q8N123 301 aa13.47□□□□□ -0.25
GGA3-206ENST00000578773 FBXL6Q8N531 539 aa13.47□□□□□ -0.25
GGA3-206ENST00000578773 FBXO22Q8NEZ5 403 aa13.47□□□□□ -0.25
GGA3-206ENST00000578773 PABPC5Q96DU9 382 aaKnown RBP13.47□□□□□ -0.25
GGA3-206ENST00000578773 CLDND1Q9NY35 253 aa13.47□□□□□ -0.25
GGA3-206ENST00000578773 KIAA1671Q9BY89 1806 aa13.47□□□□□ -0.25
GGA3-206ENST00000578773 CHD6Q8TD26 2715 aa13.47□□□□□ -0.25
GGA3-206ENST00000578773 SRGAP3O43295 1099 aa13.46□□□□□ -0.25
GGA3-206ENST00000578773 MBTPS2O43462 519 aa13.46□□□□□ -0.25
GGA3-206ENST00000578773 RAD21O60216 631 aa13.46□□□□□ -0.25
GGA3-206ENST00000578773 IDH1O75874 414 aaKnown RBP13.46□□□□□ -0.25
GGA3-206ENST00000578773 GJB5O95377 273 aa13.46□□□□□ -0.25
GGA3-206ENST00000578773 PDGFBP01127 241 aaPredicted RBP13.46□□□□□ -0.25
GGA3-206ENST00000578773 EEF2P13639 858 aaKnown RBP13.46□□□□□ -0.25
GGA3-206ENST00000578773 RPAINQ86UA6 219 aa13.46□□□□□ -0.25
GGA3-206ENST00000578773 SUGP1Q8IWZ8 645 aaKnown RBP13.46□□□□□ -0.25
GGA3-206ENST00000578773 FBXO16Q8IX29 292 aaPredicted RBP13.46□□□□□ -0.25
GGA3-206ENST00000578773 MRPL38Q96DV4 380 aaKnown RBP13.46□□□□□ -0.25
GGA3-206ENST00000578773 RIOK1Q9BRS2 568 aaKnown RBP13.46□□□□□ -0.25
GGA3-206ENST00000578773 FSD1Q9BTV5 496 aa13.46□□□□□ -0.25
GGA3-206ENST00000578773 TEX13BQ9BXU2 312 aa13.46□□□□□ -0.25
GGA3-206ENST00000578773 ANTXR1Q9H6X2 564 aa13.46□□□□□ -0.25
GGA3-206ENST00000578773 ARHGEF10LQ9HCE6 1279 aa13.46□□□□□ -0.25
GGA3-206ENST00000578773 RAVER2Q9HCJ3 691 aaKnown RBP13.46□□□□□ -0.25
GGA3-206ENST00000578773 TRPC6Q9Y210 931 aa13.46□□□□□ -0.25
GGA3-206ENST00000578773 MAP1BP46821 2468 aaKnown RBP13.46□□□□□ -0.26
GGA3-206ENST00000578773 CYP2D7A0A087X1C5 515 aa13.45□□□□□ -0.26
GGA3-206ENST00000578773 BAIAP3O94812 1187 aa13.45□□□□□ -0.26
GGA3-206ENST00000578773 RFC2P35250 354 aa13.45□□□□□ -0.26
GGA3-206ENST00000578773 GTF2F1P35269 517 aaKnown RBP eCLIP13.45□□□□□ -0.26
GGA3-206ENST00000578773 SMAD2Q15796 467 aaKnown RBP13.45□□□□□ -0.26
GGA3-206ENST00000578773 FAM47CQ5HY64 1035 aa13.45□□□□□ -0.26
GGA3-206ENST00000578773 TAPT1Q6NXT6 567 aa13.45□□□□□ -0.26
GGA3-206ENST00000578773 BANK1Q8NDB2 785 aa13.45□□□□□ -0.26
GGA3-206ENST00000578773 CNTNAP3BQ96NU0 1288 aa13.45□□□□□ -0.26
GGA3-206ENST00000578773 CTAGE1Q96RT6 745 aa13.45□□□□□ -0.26
GGA3-206ENST00000578773 CNTNAP3Q9BZ76 1288 aa13.45□□□□□ -0.26
GGA3-206ENST00000578773 UPF3BQ9BZI7 483 aaKnown RBP13.45□□□□□ -0.26
GGA3-206ENST00000578773 AP5M1Q9H0R1 490 aa13.45□□□□□ -0.26
GGA3-206ENST00000578773 TLR7Q9NYK1 1049 aaKnown RBP13.45□□□□□ -0.26
GGA3-206ENST00000578773 PROB1E7EW31 1015 aa13.44□□□□□ -0.26
GGA3-206ENST00000578773 LINC01565O15544 149 aa13.44□□□□□ -0.26
GGA3-206ENST00000578773 COPB2P35606 906 aa13.44□□□□□ -0.26
GGA3-206ENST00000578773 ZXDAP98168 799 aa13.44□□□□□ -0.26
GGA3-206ENST00000578773 PURAQ00577 322 aaKnown RBP13.44□□□□□ -0.26
GGA3-206ENST00000578773 NBPF20Q3BBV1 942 aa13.44□□□□□ -0.26
GGA3-206ENST00000578773 ANKRD35Q8N283 1001 aa13.44□□□□□ -0.26
GGA3-206ENST00000578773 FAM133AQ8N9E0 248 aa13.44□□□□□ -0.26
GGA3-206ENST00000578773 SDR42E1Q8WUS8 393 aa13.44□□□□□ -0.26
GGA3-206ENST00000578773 PURBQ96QR8 312 aaKnown RBP13.44□□□□□ -0.26
GGA3-206ENST00000578773 RAD9AQ99638 391 aa13.44□□□□□ -0.26
GGA3-206ENST00000578773 HOMER2Q9NSB8 354 aa13.44□□□□□ -0.26
GGA3-206ENST00000578773 MCM9Q9NXL9 1143 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms