RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 RAVER2Q9HCJ3 691 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ORC3Q9UBD5 711 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 CPA4Q9UI42 421 aa13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 MRPL11Q9Y3B7 192 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 RBM19Q9Y4C8 960 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ADGRA2Q96PE1 1338 aa13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ALAS1P13196 640 aa13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 CUL4AQ13619 759 aa13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 PFKFB3Q16875 520 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 USH1GQ495M9 461 aa13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 C17orf99Q6UX52 265 aa13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 HEATR3Q7Z4Q2 680 aa13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 NCAPG2Q86XI2 1143 aa13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 MCF2L2Q86YR7 1114 aa13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 RIOX2Q8IUF8 465 aa13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 NSUN7Q8NE18 718 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 CHST13Q8NET6 341 aa13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 REPS2Q8NFH8 660 aa13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 MAF1Q9H063 256 aa13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 GLT8D2Q9H1C3 349 aa13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 RBPJLQ9UBG7 517 aa13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ZNF214Q9UL59 606 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 PCDHA1Q9Y5I3 950 aa13□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ZNF236Q9UL36 1845 aa12.99□□□□□ -0.33
CDK5RAP3-210ENST00000578733 TBC1D8O95759 1140 aa12.99□□□□□ -0.33
CDK5RAP3-210ENST00000578733 BCRP11274 1271 aa12.99□□□□□ -0.33
CDK5RAP3-210ENST00000578733 MAPK4P31152 587 aa12.99□□□□□ -0.33
CDK5RAP3-210ENST00000578733 NAPAP54920 295 aa12.99□□□□□ -0.33
CDK5RAP3-210ENST00000578733 FUT2Q10981 343 aa12.99□□□□□ -0.33
CDK5RAP3-210ENST00000578733 NOM1Q5C9Z4 860 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-210ENST00000578733 WDR78Q5VTH9 848 aa12.99□□□□□ -0.33
CDK5RAP3-210ENST00000578733 TEX2Q8IWB9 1127 aa12.99□□□□□ -0.33
CDK5RAP3-210ENST00000578733 SMARCC2Q8TAQ2 1214 aa12.99□□□□□ -0.33
CDK5RAP3-210ENST00000578733 TRERF1Q96PN7 1200 aa12.99□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ACAD9Q9H845 621 aa12.99□□□□□ -0.33
CDK5RAP3-210ENST00000578733 SH3GLB2Q9NR46 395 aa12.99□□□□□ -0.33
CDK5RAP3-210ENST00000578733 BTBD7Q9P203 1132 aa12.99□□□□□ -0.33
CDK5RAP3-210ENST00000578733 IVNS1ABPQ9Y6Y0 642 aa12.99□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ZNF536O15090 1300 aa12.98□□□□□ -0.33
CDK5RAP3-210ENST00000578733 CNMDO75829 334 aa12.98□□□□□ -0.33
CDK5RAP3-210ENST00000578733 PDCP20941 246 aa12.98□□□□□ -0.33
CDK5RAP3-210ENST00000578733 GNA11P29992 359 aa12.98□□□□□ -0.33
CDK5RAP3-210ENST00000578733 SNAP25P60880 206 aa12.98□□□□□ -0.33
CDK5RAP3-210ENST00000578733 SP3Q02447 781 aa12.98□□□□□ -0.33
CDK5RAP3-210ENST00000578733 SAMD3Q8N6K7 520 aa12.98□□□□□ -0.33
CDK5RAP3-210ENST00000578733 BICD2Q8TD16 824 aa12.98□□□□□ -0.33
CDK5RAP3-210ENST00000578733 CUL5Q93034 780 aa12.98□□□□□ -0.33
CDK5RAP3-210ENST00000578733 DDX11Q96FC9 970 aa12.98□□□□□ -0.33
CDK5RAP3-210ENST00000578733 AGBL1Q96MI9 1066 aa12.98□□□□□ -0.33
CDK5RAP3-210ENST00000578733 BRMS1Q9HCU9 246 aa12.98□□□□□ -0.33
CDK5RAP3-210ENST00000578733 C6orf50Q9HD87 102 aa12.98□□□□□ -0.33
CDK5RAP3-210ENST00000578733 RNF146Q9NTX7 359 aa12.98□□□□□ -0.33
CDK5RAP3-210ENST00000578733 BARHL2Q9NY43 387 aa12.98□□□□□ -0.33
CDK5RAP3-210ENST00000578733 PFASO15067 1338 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 hCG_1642624A0A1W2PR95 340 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 STRNO43815 780 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 CTDNEP1O95476 244 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 PDIA4P13667 645 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ERCC3P19447 782 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 CALML3P27482 149 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 GJB2P29033 226 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 MRPL12P52815 198 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 FCGRTP55899 365 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ST3GAL1Q11201 340 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 KCTD2Q14681 263 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 SLC35G1Q2M3R5 365 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 GALNT17Q6IS24 598 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ANKRD35Q8N283 1001 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 GPKOWQ92917 476 aaPredicted RBP eCLIP12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ERO1AQ96HE7 468 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ALG1Q9BT22 464 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 MOV10L1Q9BXT6 1211 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 TXNRD2Q9NNW7 524 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 HOMER2Q9NSB8 354 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 MAP3K20Q9NYL2 800 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 MYH15Q9Y2K3 1946 aa12.97□□□□□ -0.33
CDK5RAP3-210ENST00000578733 GPR25O00155 361 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 JAK2O60674 1132 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 FKTNO75072 461 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 PPFIA3O75145 1194 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 FCER1AP12319 257 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 HOXD10P28358 340 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 ADCY7P51828 1080 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 NLRP5P59047 1200 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 SAFBQ15424 915 aaKnown RBP eCLIP12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 Q3C1V9 767 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 WWC2Q6AWC2 1192 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 MCTP2Q6DN12 878 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 PLEKHH3Q7Z736 793 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 RGS22Q8NE09 1264 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 COA7Q96BR5 231 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 C8orf76Q96K31 380 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 MMP19Q99542 508 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 MPHOSPH6Q99547 160 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 SLC5A4Q9NY91 659 aa12.96□□□□□ -0.33
CDK5RAP3-210ENST00000578733 MYH7BA7E2Y1 1941 aa12.96□□□□□ -0.34
CDK5RAP3-210ENST00000578733 LCTP09848 1927 aa12.96□□□□□ -0.34
CDK5RAP3-210ENST00000578733 ZSWIM8A7E2V4 1837 aa12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 ESYT2A0FGR8 921 aa12.95□□□□□ -0.34
CDK5RAP3-210ENST00000578733 SMCO2A6NFE2 343 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms