RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 TMX2Q9Y320 296 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 SLC4A7Q9Y6M7 1214 aa8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 HELZ2Q9BYK8 2649 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-209ENST00000578663 DNAJC25-GNG10A0A024R161 153 aa8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 MYADML2A6NDP7 307 aa8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 CABYRO75952 493 aa8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 C6orf222P0C671 652 aaPredicted RBP8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ATP2A2P16615 1042 aaKnown RBP8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 CYP2C18P33260 490 aa8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 STAT3P40763 770 aa8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 PLCD1P51178 756 aa8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 KIAA1755Q5JYT7 1200 aa8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 RPUSD2Q8IZ73 545 aaKnown RBP8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ABHD16BQ9H3Z7 469 aa8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 PIH1D3Q9NQM4 214 aaKnown RBP8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 SWAP70Q9UH65 585 aa8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 MYO7AQ13402 2215 aa8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 RALGAPA2Q2PPJ7 1873 aa8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 BPTFQ12830 3046 aa8.7□□□□□ -1.02
CDK5RAP3-209ENST00000578663 H3BQ06 376 aaPredicted RBP8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 VWA5AO00534 786 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 MPHOSPH10O00566 681 aaKnown RBP8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 SNAI1O95863 264 aaPredicted RBP8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 CT47B1P0C2W7 299 aaPredicted RBP8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ZAP70P43403 619 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ICA1Q05084 483 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 G3BP1Q13283 466 aaKnown RBP eCLIP8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ACVR2BQ13705 512 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 PUS10Q3MIT2 529 aaKnown RBP8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 TNNI3KQ59H18 835 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 TMEM67Q5HYA8 995 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 GNASQ5JWF2 1037 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 MIGA1Q8NAN2 632 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 REPS2Q8NFH8 660 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 DBNDD2Q9BQY9 259 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 NOC4LQ9BVI4 516 aaKnown RBP8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 TEX13BQ9BXU2 312 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 LMCD1Q9NZU5 365 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ZHX1Q9UKY1 873 aaPredicted RBP8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 PPP1R9AQ9ULJ8 1098 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 FPGT-TNNI3KV9GXZ4 949 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 MYH8P13535 1937 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 TET1Q8NFU7 2136 aa8.69□□□□□ -1.02
CDK5RAP3-209ENST00000578663 CTAGE5O15320 804 aa8.68□□□□□ -1.02
CDK5RAP3-209ENST00000578663 GALR2O43603 387 aaPredicted RBP8.68□□□□□ -1.02
CDK5RAP3-209ENST00000578663 IDH1O75874 414 aaKnown RBP8.68□□□□□ -1.02
CDK5RAP3-209ENST00000578663 POLR3DP05423 398 aaPredicted RBP8.68□□□□□ -1.02
CDK5RAP3-209ENST00000578663 PHOSPHO2Q8TCD6 241 aa8.68□□□□□ -1.02
CDK5RAP3-209ENST00000578663 GDPD5Q8WTR4 605 aa8.68□□□□□ -1.02
CDK5RAP3-209ENST00000578663 VTI1AQ96AJ9 217 aa8.68□□□□□ -1.02
CDK5RAP3-209ENST00000578663 CCDC17Q96LX7 622 aa8.68□□□□□ -1.02
CDK5RAP3-209ENST00000578663 SLC9A7Q96T83 725 aa8.68□□□□□ -1.02
CDK5RAP3-209ENST00000578663 RIOK1Q9BRS2 568 aaKnown RBP8.68□□□□□ -1.02
CDK5RAP3-209ENST00000578663 WNT8AQ9H1J5 351 aa8.68□□□□□ -1.02
CDK5RAP3-209ENST00000578663 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.68□□□□□ -1.02
CDK5RAP3-209ENST00000578663 UMODL1Q5DID0 1318 aa8.68□□□□□ -1.02
CDK5RAP3-209ENST00000578663 NBEAQ8NFP9 2946 aa8.68□□□□□ -1.02
CDK5RAP3-209ENST00000578663 MCM3APO60318 1980 aa8.68□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ZBBXA8MT70 800 aa8.67□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ATP2A1O14983 1001 aa8.67□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ADCY6O43306 1168 aa8.67□□□□□ -1.02
CDK5RAP3-209ENST00000578663 KDM4AO75164 1064 aa8.67□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ZXDAP98168 799 aa8.67□□□□□ -1.02
CDK5RAP3-209ENST00000578663 CCDC144BQ3MJ40 725 aa8.67□□□□□ -1.02
CDK5RAP3-209ENST00000578663 SIAH1Q8IUQ4 282 aa8.67□□□□□ -1.02
CDK5RAP3-209ENST00000578663 SPICE1Q8N0Z3 855 aa8.67□□□□□ -1.02
CDK5RAP3-209ENST00000578663 DDX11Q96FC9 970 aa8.67□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ASIC4Q96FT7 647 aa8.67□□□□□ -1.02
CDK5RAP3-209ENST00000578663 CRNKL1Q9BZJ0 848 aaKnown RBP8.67□□□□□ -1.02
CDK5RAP3-209ENST00000578663 FBXO28Q9NVF7 368 aa8.67□□□□□ -1.02
CDK5RAP3-209ENST00000578663 FANCMQ8IYD8 2048 aa8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 GNAI2P04899 355 aa8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ACTN1P12814 892 aa8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 RFC2P35250 354 aa8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 CCL23P55773 120 aa8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 IRX5P78411 483 aaPredicted RBP8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ITGA7Q13683 1181 aa8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 KIAA2013Q8IYS2 634 aa8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ARHGAP45Q92619 1136 aa8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 FGD4Q96M96 766 aa8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 AGBL1Q96MI9 1066 aa8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 KATNBL1Q9H079 304 aa8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 GOPCQ9HD26 462 aa8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 MCM9Q9NXL9 1143 aa8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 FBXO40Q9UH90 709 aa8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 DBNLQ9UJU6 430 aaKnown RBP8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 NOB1Q9ULX3 412 aaKnown RBP8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 TANC1Q9C0D5 1861 aa8.66□□□□□ -1.02
CDK5RAP3-209ENST00000578663 GRIN2DO15399 1336 aa8.65□□□□□ -1.02
CDK5RAP3-209ENST00000578663 CEP295Q9C0D2 2601 aa8.65□□□□□ -1.02
CDK5RAP3-209ENST00000578663 MAGEB6P1A0A0J9YX57 407 aa8.65□□□□□ -1.02
CDK5RAP3-209ENST00000578663 PNMA6EA0A0J9YXQ4 647 aa8.65□□□□□ -1.02
CDK5RAP3-209ENST00000578663 SOBPA7XYQ1 873 aa8.65□□□□□ -1.02
CDK5RAP3-209ENST00000578663 KIF28PB7ZC32 967 aa8.65□□□□□ -1.02
CDK5RAP3-209ENST00000578663 ZEB2O60315 1214 aa8.65□□□□□ -1.02
CDK5RAP3-209ENST00000578663 B4GALT4O60513 344 aa8.65□□□□□ -1.02
CDK5RAP3-209ENST00000578663 SUPT20HL2P0C7V6 817 aa8.65□□□□□ -1.02
CDK5RAP3-209ENST00000578663 NUBP1P53384 320 aa8.65□□□□□ -1.02
CDK5RAP3-209ENST00000578663 TTLL4Q14679 1199 aa8.65□□□□□ -1.02
CDK5RAP3-209ENST00000578663 SNRNP48Q6IEG0 339 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms