RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-208ENST00000578218 MFSD5Q6N075 450 aa29.49■■■□□ 2.31
THRA-208ENST00000578218 DCAF4Q8WV16 495 aa29.49■■■□□ 2.31
THRA-208ENST00000578218 HELLSQ9NRZ9 838 aa29.49■■■□□ 2.31
THRA-208ENST00000578218 CDK7P50613 346 aa29.48■■■□□ 2.31
THRA-208ENST00000578218 MUM1L1Q5H9M0 696 aa29.48■■■□□ 2.31
THRA-208ENST00000578218 RRP12Q5JTH9 1297 aaKnown RBP29.48■■■□□ 2.31
THRA-208ENST00000578218 NSMFQ6X4W1 530 aa29.48■■■□□ 2.31
THRA-208ENST00000578218 FAM126BQ8IXS8 530 aa29.48■■■□□ 2.31
THRA-208ENST00000578218 CRBNQ96SW2 442 aa29.48■■■□□ 2.31
THRA-208ENST00000578218 PPP1R12CQ9BZL4 782 aa29.48■■■□□ 2.31
THRA-208ENST00000578218 ORC4O43929 436 aa29.47■■■□□ 2.31
THRA-208ENST00000578218 FBXO16Q8IX29 292 aaPredicted RBP29.47■■■□□ 2.31
THRA-208ENST00000578218 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.47■■■□□ 2.31
THRA-208ENST00000578218 AP5M1Q9H0R1 490 aa29.47■■■□□ 2.31
THRA-208ENST00000578218 CYP39A1Q9NYL5 469 aa29.47■■■□□ 2.31
THRA-208ENST00000578218 CTAGE5O15320 804 aa29.46■■■□□ 2.31
THRA-208ENST00000578218 DNAJB2P25686 324 aa29.46■■■□□ 2.31
THRA-208ENST00000578218 TMEM199Q8N511 208 aa29.46■■■□□ 2.31
THRA-208ENST00000578218 COL25A1Q9BXS0 654 aaPredicted RBP29.46■■■□□ 2.31
THRA-208ENST00000578218 ASTN1O14525 1302 aa29.45■■■□□ 2.31
THRA-208ENST00000578218 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.45■■■□□ 2.31
THRA-208ENST00000578218 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.45■■■□□ 2.31
THRA-208ENST00000578218 ICAM1P05362 532 aa29.45■■■□□ 2.31
THRA-208ENST00000578218 PDE1AP54750 535 aa29.45■■■□□ 2.31
THRA-208ENST00000578218 FSCN1Q16658 493 aaKnown RBP29.45■■■□□ 2.31
THRA-208ENST00000578218 CXCL17Q6UXB2 119 aa29.45■■■□□ 2.31
THRA-208ENST00000578218 EEPD1Q7L9B9 569 aa29.45■■■□□ 2.31
THRA-208ENST00000578218 FAM227BQ96M60 508 aa29.45■■■□□ 2.31
THRA-208ENST00000578218 GNEQ9Y223 722 aaKnown RBP29.45■■■□□ 2.31
THRA-208ENST00000578218 DDX49Q9Y6V7 483 aaKnown RBP29.45■■■□□ 2.31
THRA-208ENST00000578218 A0A0D9SFI3 127 aa29.44■■■□□ 2.3
THRA-208ENST00000578218 NKX3-2P78367 333 aa29.44■■■□□ 2.3
THRA-208ENST00000578218 ALX1Q15699 326 aa29.44■■■□□ 2.3
THRA-208ENST00000578218 RANBP17Q9H2T7 1088 aaKnown RBP29.44■■■□□ 2.3
THRA-208ENST00000578218 CUL9Q8IWT3 2517 aa29.44■■■□□ 2.3
THRA-208ENST00000578218 FRMPD2Q68DX3 1309 aaPredicted RBP29.44■■■□□ 2.3
THRA-208ENST00000578218 ZEB2O60315 1214 aa29.43■■■□□ 2.3
THRA-208ENST00000578218 CABYRO75952 493 aa29.43■■■□□ 2.3
THRA-208ENST00000578218 CSF2RAP15509 400 aa29.43■■■□□ 2.3
THRA-208ENST00000578218 SLC16A2P36021 539 aa29.43■■■□□ 2.3
THRA-208ENST00000578218 MCMDC2Q4G0Z9 681 aa29.43■■■□□ 2.3
THRA-208ENST00000578218 SYDE2Q5VT97 1194 aa29.43■■■□□ 2.3
THRA-208ENST00000578218 PSRC1Q6PGN9 363 aaPredicted RBP29.43■■■□□ 2.3
THRA-208ENST00000578218 TOP1P11387 765 aaKnown RBP29.42■■■□□ 2.3
THRA-208ENST00000578218 SMPD1P17405 629 aa29.42■■■□□ 2.3
THRA-208ENST00000578218 NOVP48745 357 aa29.42■■■□□ 2.3
THRA-208ENST00000578218 TTBK2Q6IQ55 1244 aa29.42■■■□□ 2.3
THRA-208ENST00000578218 VTA1Q9NP79 307 aa29.42■■■□□ 2.3
THRA-208ENST00000578218 PDGFCQ9NRA1 345 aa29.42■■■□□ 2.3
THRA-208ENST00000578218 LAMA4Q16363 1823 aa29.42■■■□□ 2.3
THRA-208ENST00000578218 ZMYM6O95789 1325 aa29.42■■■□□ 2.3
THRA-208ENST00000578218 DYNC1LI2O43237 492 aaPredicted RBP29.41■■■□□ 2.3
THRA-208ENST00000578218 FGAP02671 866 aa29.41■■■□□ 2.3
THRA-208ENST00000578218 PTGS1P23219 599 aa29.41■■■□□ 2.3
THRA-208ENST00000578218 TIFAQ96CG3 184 aa29.41■■■□□ 2.3
THRA-208ENST00000578218 TMEM47Q9BQJ4 181 aa29.41■■■□□ 2.3
THRA-208ENST00000578218 TRIM6-TRIM34B2RNG4 842 aa29.4■■■□□ 2.3
THRA-208ENST00000578218 FGRP09769 529 aa29.4■■■□□ 2.3
THRA-208ENST00000578218 ACRP10323 421 aa29.4■■■□□ 2.3
THRA-208ENST00000578218 HAND2P61296 217 aa29.4■■■□□ 2.3
THRA-208ENST00000578218 HDAC1Q13547 482 aaPredicted RBP29.4■■■□□ 2.3
THRA-208ENST00000578218 ITGA7Q13683 1181 aa29.4■■■□□ 2.3
THRA-208ENST00000578218 TMEM240Q5SV17 173 aa29.4■■■□□ 2.3
THRA-208ENST00000578218 IQSEC1Q6DN90 963 aa29.4■■■□□ 2.3
THRA-208ENST00000578218 PURBQ96QR8 312 aaKnown RBP29.4■■■□□ 2.3
THRA-208ENST00000578218 GPCPD1Q9NPB8 672 aa29.4■■■□□ 2.3
THRA-208ENST00000578218 ADD3Q9UEY8 706 aaKnown RBP29.4■■■□□ 2.3
THRA-208ENST00000578218 PRUNE2Q8WUY3 3088 aa29.39■■■□□ 2.3
THRA-208ENST00000578218 PTPDC1A2A3K4 754 aa29.39■■■□□ 2.3
THRA-208ENST00000578218 CD4P01730 458 aa29.39■■■□□ 2.3
THRA-208ENST00000578218 HSPD1P10809 573 aaKnown RBP29.39■■■□□ 2.3
THRA-208ENST00000578218 CYP2C18P33260 490 aa29.39■■■□□ 2.3
THRA-208ENST00000578218 NMIQ13287 307 aaPredicted RBP29.39■■■□□ 2.3
THRA-208ENST00000578218 TAPT1Q6NXT6 567 aa29.39■■■□□ 2.3
THRA-208ENST00000578218 BTNL9Q6UXG8 535 aa29.39■■■□□ 2.3
THRA-208ENST00000578218 KIAA1211Q6ZU35 1233 aa29.39■■■□□ 2.3
THRA-208ENST00000578218 ZNF589Q86UQ0 364 aaPredicted RBP29.39■■■□□ 2.3
THRA-208ENST00000578218 HIPK3Q9H422 1215 aa29.39■■■□□ 2.3
THRA-208ENST00000578218 CCDC171Q6TFL3 1326 aa29.39■■■□□ 2.3
THRA-208ENST00000578218 NFIBO00712 420 aa29.38■■■□□ 2.29
THRA-208ENST00000578218 ALDH5A1P51649 535 aaPredicted RBP29.38■■■□□ 2.29
THRA-208ENST00000578218 BAATQ14032 418 aaPredicted RBP29.38■■■□□ 2.29
THRA-208ENST00000578218 GRIN2CQ14957 1233 aa29.38■■■□□ 2.29
THRA-208ENST00000578218 ZNF576Q9H609 170 aa29.38■■■□□ 2.29
THRA-208ENST00000578218 GBF1Q92538 1859 aa29.38■■■□□ 2.29
THRA-208ENST00000578218 ZNF365Q70YC5 407 aa29.37■■■□□ 2.29
THRA-208ENST00000578218 C16orf59Q7L2K0 433 aa29.37■■■□□ 2.29
THRA-208ENST00000578218 SLC43A3Q8NBI5 491 aa29.37■■■□□ 2.29
THRA-208ENST00000578218 RILPL2Q969X0 211 aa29.37■■■□□ 2.29
THRA-208ENST00000578218 LNPKQ9C0E8 428 aa29.37■■■□□ 2.29
THRA-208ENST00000578218 MTIF3Q9H2K0 278 aaKnown RBP29.37■■■□□ 2.29
THRA-208ENST00000578218 TCP11L1Q9NUJ3 509 aa29.37■■■□□ 2.29
THRA-208ENST00000578218 Q9Y3F1 56 aa29.37■■■□□ 2.29
THRA-208ENST00000578218 PDHBP11177 359 aa29.36■■■□□ 2.29
THRA-208ENST00000578218 SLC30A10Q6XR72 485 aa29.36■■■□□ 2.29
THRA-208ENST00000578218 TICAM2Q86XR7 235 aa29.36■■■□□ 2.29
THRA-208ENST00000578218 MORC4Q8TE76 937 aa29.36■■■□□ 2.29
THRA-208ENST00000578218 SEZ6LQ9BYH1 1024 aa29.36■■■□□ 2.29
THRA-208ENST00000578218 IL23AQ9NPF7 189 aa29.36■■■□□ 2.29
THRA-208ENST00000578218 PSMC6P62333 389 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms