RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 SAMD1Q6SPF0 538 aaPredicted RBP19.43■□□□□ 0.7
CDK5RAP3-207ENST00000578134 FERMT3Q86UX7 667 aa19.43■□□□□ 0.7
CDK5RAP3-207ENST00000578134 REPS2Q8NFH8 660 aa19.43■□□□□ 0.7
CDK5RAP3-207ENST00000578134 BRI3BPQ8WY22 251 aa19.43■□□□□ 0.7
CDK5RAP3-207ENST00000578134 SHISA4Q96DD7 197 aa19.43■□□□□ 0.7
CDK5RAP3-207ENST00000578134 TEX13BQ9BXU2 312 aa19.43■□□□□ 0.7
CDK5RAP3-207ENST00000578134 CFAP45Q9UL16 551 aa19.43■□□□□ 0.7
CDK5RAP3-207ENST00000578134 RABGAP1Q9Y3P9 1069 aa19.43■□□□□ 0.7
CDK5RAP3-207ENST00000578134 ZNF536O15090 1300 aa19.43■□□□□ 0.7
CDK5RAP3-207ENST00000578134 M0R2N6 131 aa19.42■□□□□ 0.7
CDK5RAP3-207ENST00000578134 PIK3CDO00329 1044 aa19.42■□□□□ 0.7
CDK5RAP3-207ENST00000578134 PDHXO00330 501 aa19.42■□□□□ 0.7
CDK5RAP3-207ENST00000578134 FOSP01100 380 aaPredicted RBP19.42■□□□□ 0.7
CDK5RAP3-207ENST00000578134 STAT3P40763 770 aa19.42■□□□□ 0.7
CDK5RAP3-207ENST00000578134 HERVK_113P62684 666 aa19.42■□□□□ 0.7
CDK5RAP3-207ENST00000578134 SREBF2Q12772 1141 aa19.42■□□□□ 0.7
CDK5RAP3-207ENST00000578134 USH1GQ495M9 461 aa19.42■□□□□ 0.7
CDK5RAP3-207ENST00000578134 RILPL1Q5EBL4 403 aa19.42■□□□□ 0.7
CDK5RAP3-207ENST00000578134 FOXD4L5Q5VV16 416 aaPredicted RBP19.42■□□□□ 0.7
CDK5RAP3-207ENST00000578134 KRT25Q7Z3Z0 450 aa19.42■□□□□ 0.7
CDK5RAP3-207ENST00000578134 REXO1Q8N1G1 1221 aaKnown RBP19.42■□□□□ 0.7
CDK5RAP3-207ENST00000578134 FOXD4L4Q8WXT5 416 aaPredicted RBP19.42■□□□□ 0.7
CDK5RAP3-207ENST00000578134 BTBD19C9JJ37 291 aa19.41■□□□□ 0.7
CDK5RAP3-207ENST00000578134 GCLCP48506 637 aaPredicted RBP19.41■□□□□ 0.7
CDK5RAP3-207ENST00000578134 TRAPPC10P48553 1259 aa19.41■□□□□ 0.7
CDK5RAP3-207ENST00000578134 AP3B2Q13367 1082 aa19.41■□□□□ 0.7
CDK5RAP3-207ENST00000578134 CSPP1Q1MSJ5 1256 aa19.41■□□□□ 0.7
CDK5RAP3-207ENST00000578134 CPXCR1Q8N123 301 aa19.41■□□□□ 0.7
CDK5RAP3-207ENST00000578134 TNFRSF25Q93038 417 aa19.41■□□□□ 0.7
CDK5RAP3-207ENST00000578134 AGBL1Q96MI9 1066 aa19.41■□□□□ 0.7
CDK5RAP3-207ENST00000578134 RAVER2Q9HCJ3 691 aaKnown RBP19.41■□□□□ 0.7
CDK5RAP3-207ENST00000578134 ZNF214Q9UL59 606 aaPredicted RBP19.41■□□□□ 0.7
CDK5RAP3-207ENST00000578134 NOL7Q9UMY1 257 aaKnown RBP19.41■□□□□ 0.7
CDK5RAP3-207ENST00000578134 PCDHA6Q9UN73 950 aa19.41■□□□□ 0.7
CDK5RAP3-207ENST00000578134 PCDHA8Q9Y5H6 950 aa19.41■□□□□ 0.7
CDK5RAP3-207ENST00000578134 RLFQ13129 1914 aa19.41■□□□□ 0.7
CDK5RAP3-207ENST00000578134 CCDC194A0A1B0GVG4 234 aa19.4■□□□□ 0.7
CDK5RAP3-207ENST00000578134 RASSF10A6NK89 507 aa19.4■□□□□ 0.7
CDK5RAP3-207ENST00000578134 FAM155AB1AL88 458 aaPredicted RBP19.4■□□□□ 0.7
CDK5RAP3-207ENST00000578134 KIF28PB7ZC32 967 aa19.4■□□□□ 0.7
CDK5RAP3-207ENST00000578134 SLC25A27O95847 323 aa19.4■□□□□ 0.7
CDK5RAP3-207ENST00000578134 CLK2P49760 499 aaKnown RBP19.4■□□□□ 0.7
CDK5RAP3-207ENST00000578134 KRT85P78386 507 aa19.4■□□□□ 0.7
CDK5RAP3-207ENST00000578134 GHRHRQ02643 423 aa19.4■□□□□ 0.7
CDK5RAP3-207ENST00000578134 TMEM132BQ14DG7 1078 aa19.4■□□□□ 0.7
CDK5RAP3-207ENST00000578134 DEFB115Q30KQ5 88 aa19.4■□□□□ 0.7
CDK5RAP3-207ENST00000578134 MYSM1Q5VVJ2 828 aa19.4■□□□□ 0.7
CDK5RAP3-207ENST00000578134 CHST13Q8NET6 341 aa19.4■□□□□ 0.7
CDK5RAP3-207ENST00000578134 OXER1Q8TDS5 423 aa19.4■□□□□ 0.7
CDK5RAP3-207ENST00000578134 FBXO40Q9UH90 709 aa19.4■□□□□ 0.7
CDK5RAP3-207ENST00000578134 PARP14Q460N5 1801 aa19.39■□□□□ 0.7
CDK5RAP3-207ENST00000578134 GOLGA6L22H0YM25 854 aa19.39■□□□□ 0.69
CDK5RAP3-207ENST00000578134 GCOM1H8Y6P7 765 aaPredicted RBP19.39■□□□□ 0.69
CDK5RAP3-207ENST00000578134 BAG4O95429 457 aaKnown RBP19.39■□□□□ 0.69
CDK5RAP3-207ENST00000578134 POLR2MP0CAP2 368 aa19.39■□□□□ 0.69
CDK5RAP3-207ENST00000578134 TM4SF4P48230 202 aa19.39■□□□□ 0.69
CDK5RAP3-207ENST00000578134 MKRN3Q13064 507 aaKnown RBP19.39■□□□□ 0.69
CDK5RAP3-207ENST00000578134 NOGQ13253 232 aa19.39■□□□□ 0.69
CDK5RAP3-207ENST00000578134 NR5A1Q13285 461 aa19.39■□□□□ 0.69
CDK5RAP3-207ENST00000578134 RIOX2Q8IUF8 465 aa19.39■□□□□ 0.69
CDK5RAP3-207ENST00000578134 TRERF1Q96PN7 1200 aa19.39■□□□□ 0.69
CDK5RAP3-207ENST00000578134 PARK7Q99497 189 aaKnown RBP19.39■□□□□ 0.69
CDK5RAP3-207ENST00000578134 SCAND2PQ9GZW5 306 aaPredicted RBP19.39■□□□□ 0.69
CDK5RAP3-207ENST00000578134 ALAS1P13196 640 aa19.38■□□□□ 0.69
CDK5RAP3-207ENST00000578134 NONOQ15233 471 aaKnown RBP eCLIP19.38■□□□□ 0.69
CDK5RAP3-207ENST00000578134 SNRNP48Q6IEG0 339 aaKnown RBP19.38■□□□□ 0.69
CDK5RAP3-207ENST00000578134 PTPN18Q99952 460 aa19.38■□□□□ 0.69
CDK5RAP3-207ENST00000578134 EHMT1Q9H9B1 1298 aa19.38■□□□□ 0.69
CDK5RAP3-207ENST00000578134 BIN2Q9UBW5 565 aaPredicted RBP19.38■□□□□ 0.69
CDK5RAP3-207ENST00000578134 MEIS2O14770 477 aa19.37■□□□□ 0.69
CDK5RAP3-207ENST00000578134 PTMSP20962 102 aa19.37■□□□□ 0.69
CDK5RAP3-207ENST00000578134 CCNA1P78396 465 aa19.37■□□□□ 0.69
CDK5RAP3-207ENST00000578134 ORC2Q13416 577 aaPredicted RBP19.37■□□□□ 0.69
CDK5RAP3-207ENST00000578134 FAM43AQ8N2R8 423 aa19.37■□□□□ 0.69
CDK5RAP3-207ENST00000578134 SHCBP1Q8NEM2 672 aa19.37■□□□□ 0.69
CDK5RAP3-207ENST00000578134 SMCR8Q8TEV9 937 aaPredicted RBP19.37■□□□□ 0.69
CDK5RAP3-207ENST00000578134 CLEC4DQ8WXI8 215 aa19.37■□□□□ 0.69
CDK5RAP3-207ENST00000578134 NAP1L4Q99733 375 aaKnown RBP19.37■□□□□ 0.69
CDK5RAP3-207ENST00000578134 SPATC1LQ9H0A9 340 aa19.37■□□□□ 0.69
CDK5RAP3-207ENST00000578134 RBPJLQ9UBG7 517 aa19.37■□□□□ 0.69
CDK5RAP3-207ENST00000578134 SPDYE3A6NKU9 549 aa19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 OPLAHO14841 1288 aa19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 BMP15O95972 392 aa19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 ALDH1A1P00352 501 aa19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 HSD17B4P51659 736 aa19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 DNM1Q05193 864 aaKnown RBP19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 PLS1Q14651 629 aa19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 PIK3AP1Q6ZUJ8 805 aa19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 ACAD9Q9H845 621 aa19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 RNF146Q9NTX7 359 aa19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 POLR3EQ9NVU0 708 aa19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 RTEL1Q9NZ71 1219 aa19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 BTBD7Q9P203 1132 aa19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 MORF4L1Q9UBU8 362 aa19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 CEP131Q9UPN4 1083 aa19.36■□□□□ 0.69
CDK5RAP3-207ENST00000578134 CFBP00751 764 aa19.35■□□□□ 0.69
CDK5RAP3-207ENST00000578134 USP11P51784 963 aa19.35■□□□□ 0.69
CDK5RAP3-207ENST00000578134 JAKMIP3Q5VZ66 844 aa19.35■□□□□ 0.69
CDK5RAP3-207ENST00000578134 IFNL1Q8IU54 200 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms