RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 VTI1AQ96AJ9 217 aa17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 GLT1D1Q96MS3 346 aa17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 RNF41Q9H4P4 317 aaPredicted RBP17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 GPCPD1Q9NPB8 672 aa17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 DIAPH3Q9NSV4 1193 aa17.59■□□□□ 0.41
RN7SL560P-201ENST00000577943 DCDC2CA8MYV0 355 aa17.58■□□□□ 0.4
RN7SL560P-201ENST00000577943 ZNF213O14771 459 aa17.58■□□□□ 0.4
RN7SL560P-201ENST00000577943 ASGR1P07306 291 aa17.58■□□□□ 0.4
RN7SL560P-201ENST00000577943 GJA9P57773 515 aa17.58■□□□□ 0.4
RN7SL560P-201ENST00000577943 IRX5P78411 483 aaPredicted RBP17.58■□□□□ 0.4
RN7SL560P-201ENST00000577943 GNASQ5JWF2 1037 aa17.58■□□□□ 0.4
RN7SL560P-201ENST00000577943 BTNL9Q6UXG8 535 aa17.58■□□□□ 0.4
RN7SL560P-201ENST00000577943 TBC1D10CQ8IV04 446 aa17.58■□□□□ 0.4
RN7SL560P-201ENST00000577943 TTC14Q96N46 770 aa17.58■□□□□ 0.4
RN7SL560P-201ENST00000577943 KATNBL1Q9H079 304 aa17.58■□□□□ 0.4
RN7SL560P-201ENST00000577943 UPF3AQ9H1J1 476 aaKnown RBP17.58■□□□□ 0.4
RN7SL560P-201ENST00000577943 RANBP17Q9H2T7 1088 aaKnown RBP17.58■□□□□ 0.4
RN7SL560P-201ENST00000577943 TMEM39AQ9NV64 488 aa17.58■□□□□ 0.4
RN7SL560P-201ENST00000577943 CYP39A1Q9NYL5 469 aa17.58■□□□□ 0.4
RN7SL560P-201ENST00000577943 HIP1O00291 1037 aa17.57■□□□□ 0.4
RN7SL560P-201ENST00000577943 PDHBP11177 359 aa17.57■□□□□ 0.4
RN7SL560P-201ENST00000577943 RAG1P15918 1043 aa17.57■□□□□ 0.4
RN7SL560P-201ENST00000577943 TNFAIP2Q03169 654 aa17.57■□□□□ 0.4
RN7SL560P-201ENST00000577943 C9orf50Q5SZB4 431 aa17.57■□□□□ 0.4
RN7SL560P-201ENST00000577943 ESR2Q92731 530 aa17.57■□□□□ 0.4
RN7SL560P-201ENST00000577943 TOX2Q96NM4 488 aa17.57■□□□□ 0.4
RN7SL560P-201ENST00000577943 MTMR10Q9NXD2 777 aa17.57■□□□□ 0.4
RN7SL560P-201ENST00000577943 ELP1O95163 1332 aa17.56■□□□□ 0.4
RN7SL560P-201ENST00000577943 NEDD4P46934 1319 aa17.56■□□□□ 0.4
RN7SL560P-201ENST00000577943 MROH7Q68CQ1 1323 aa17.56■□□□□ 0.4
RN7SL560P-201ENST00000577943 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.56■□□□□ 0.4
RN7SL560P-201ENST00000577943 KIAA0355O15063 1070 aa17.56■□□□□ 0.4
RN7SL560P-201ENST00000577943 ITGB8P26012 769 aa17.56■□□□□ 0.4
RN7SL560P-201ENST00000577943 FAAP100Q0VG06 881 aa17.56■□□□□ 0.4
RN7SL560P-201ENST00000577943 EEPD1Q7L9B9 569 aa17.56■□□□□ 0.4
RN7SL560P-201ENST00000577943 ANKRD33Q7Z3H0 272 aa17.56■□□□□ 0.4
RN7SL560P-201ENST00000577943 ZKSCAN3Q9BRR0 538 aa17.56■□□□□ 0.4
RN7SL560P-201ENST00000577943 ASTN1O14525 1302 aa17.55■□□□□ 0.4
RN7SL560P-201ENST00000577943 ZNF543Q08ER8 600 aa17.55■□□□□ 0.4
RN7SL560P-201ENST00000577943 TLK2Q86UE8 772 aa17.55■□□□□ 0.4
RN7SL560P-201ENST00000577943 SLC17A8Q8NDX2 589 aa17.55■□□□□ 0.4
RN7SL560P-201ENST00000577943 DDX49Q9Y6V7 483 aaKnown RBP17.55■□□□□ 0.4
RN7SL560P-201ENST00000577943 A0A0U1RQG5 324 aaPredicted RBP17.54■□□□□ 0.4
RN7SL560P-201ENST00000577943 PTPDC1A2A3K4 754 aa17.54■□□□□ 0.4
RN7SL560P-201ENST00000577943 BEX3Q00994 111 aa17.54■□□□□ 0.4
RN7SL560P-201ENST00000577943 BAATQ14032 418 aaPredicted RBP17.54■□□□□ 0.4
RN7SL560P-201ENST00000577943 FAM109BQ6ICB4 259 aaPredicted RBP17.54■□□□□ 0.4
RN7SL560P-201ENST00000577943 IQCA1Q86XH1 822 aa17.54■□□□□ 0.4
RN7SL560P-201ENST00000577943 FBXO16Q8IX29 292 aaPredicted RBP17.54■□□□□ 0.4
RN7SL560P-201ENST00000577943 PURBQ96QR8 312 aaKnown RBP17.54■□□□□ 0.4
RN7SL560P-201ENST00000577943 AP5M1Q9H0R1 490 aa17.54■□□□□ 0.4
RN7SL560P-201ENST00000577943 PDGFCQ9NRA1 345 aa17.54■□□□□ 0.4
RN7SL560P-201ENST00000577943 ADD3Q9UEY8 706 aaKnown RBP17.54■□□□□ 0.4
RN7SL560P-201ENST00000577943 GNEQ9Y223 722 aaKnown RBP17.54■□□□□ 0.4
RN7SL560P-201ENST00000577943 STXBP5LQ9Y2K9 1186 aa17.54■□□□□ 0.4
RN7SL560P-201ENST00000577943 SUPT16HQ9Y5B9 1047 aaKnown RBP17.54■□□□□ 0.4
RN7SL560P-201ENST00000577943 ARVCFO00192 962 aa17.53■□□□□ 0.4
RN7SL560P-201ENST00000577943 NFIBO00712 420 aa17.53■□□□□ 0.4
RN7SL560P-201ENST00000577943 CTAGE5O15320 804 aa17.53■□□□□ 0.4
RN7SL560P-201ENST00000577943 DYNC1LI2O43237 492 aaPredicted RBP17.53■□□□□ 0.4
RN7SL560P-201ENST00000577943 KDM4AO75164 1064 aa17.53■□□□□ 0.4
RN7SL560P-201ENST00000577943 FPGSQ05932 587 aa17.53■□□□□ 0.4
RN7SL560P-201ENST00000577943 CCDC178Q5BJE1 867 aa17.53■□□□□ 0.4
RN7SL560P-201ENST00000577943 ZNF697Q5TEC3 545 aa17.53■□□□□ 0.4
RN7SL560P-201ENST00000577943 IQSEC1Q6DN90 963 aa17.53■□□□□ 0.4
RN7SL560P-201ENST00000577943 DGKHQ86XP1 1220 aa17.53■□□□□ 0.4
RN7SL560P-201ENST00000577943 FAM161BQ96MY7 647 aa17.53■□□□□ 0.4
RN7SL560P-201ENST00000577943 DSCC1Q9BVC3 393 aa17.53■□□□□ 0.4
RN7SL560P-201ENST00000577943 PNMA2Q9UL42 364 aa17.53■□□□□ 0.4
RN7SL560P-201ENST00000577943 MYO9BQ13459 2157 aa17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 TLR3O15455 904 aaKnown RBP17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 ZEB2O60315 1214 aa17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 SNHG28P0DPA3 235 aa17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 SMPD1P17405 629 aa17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 NT5C2P49902 561 aa17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 CDK7P50613 346 aa17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 ALDH5A1P51649 535 aaPredicted RBP17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 NKX3-2P78367 333 aa17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 FSCN1Q16658 493 aaKnown RBP17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 IMMTQ16891 758 aaKnown RBP17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 GPATCH4Q5T3I0 446 aaKnown RBP17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 TAPT1Q6NXT6 567 aa17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 KIAA1211Q6ZU35 1233 aa17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 RNPC3Q96LT9 517 aaKnown RBP17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 VTA1Q9NP79 307 aa17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 CTNNA3Q9UI47 895 aa17.52■□□□□ 0.4
RN7SL560P-201ENST00000577943 B4E1Z4 1266 aa17.51■□□□□ 0.39
RN7SL560P-201ENST00000577943 TIMP1P01033 207 aa17.51■□□□□ 0.39
RN7SL560P-201ENST00000577943 GOLGA8HP0CJ92 632 aa17.51■□□□□ 0.39
RN7SL560P-201ENST00000577943 PTGS1P23219 599 aa17.51■□□□□ 0.39
RN7SL560P-201ENST00000577943 CALML3P27482 149 aa17.51■□□□□ 0.39
RN7SL560P-201ENST00000577943 CXCL17Q6UXB2 119 aa17.51■□□□□ 0.39
RN7SL560P-201ENST00000577943 RNF207Q6ZRF8 634 aa17.51■□□□□ 0.39
RN7SL560P-201ENST00000577943 PNMA1Q8ND90 353 aa17.51■□□□□ 0.39
RN7SL560P-201ENST00000577943 MORC4Q8TE76 937 aa17.51■□□□□ 0.39
RN7SL560P-201ENST00000577943 CLEC4DQ8WXI8 215 aa17.51■□□□□ 0.39
RN7SL560P-201ENST00000577943 UBA5Q9GZZ9 404 aa17.51■□□□□ 0.39
RN7SL560P-201ENST00000577943 KAT14Q9H8E8 782 aa17.51■□□□□ 0.39
RN7SL560P-201ENST00000577943 TBX21Q9UL17 535 aa17.51■□□□□ 0.39
RN7SL560P-201ENST00000577943 WDR19Q8NEZ3 1342 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms