RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 SPDYE16A6NNV3 312 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 ATP2A1O14983 1001 aa15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 BMP15O95972 392 aa15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 NCLP19338 710 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 SREBF2Q12772 1141 aa15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 DGKZQ13574 1117 aa15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 CCL15Q16663 113 aa15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 TREML2Q5T2D2 321 aa15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 MYSM1Q5VVJ2 828 aa15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 ANKRD23Q86SG2 305 aa15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 RASAL3Q86YV0 1011 aa15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 ZNF784Q8NCA9 323 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 COA7Q96BR5 231 aa15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 ATG4CQ96DT6 458 aa15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 NAP1L4Q99733 375 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 TEX13BQ9BXU2 312 aa15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 PSTPIP2Q9H939 334 aa15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 GJB4Q9NTQ9 266 aa15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 MAP3K20Q9NYL2 800 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-205ENST00000577802 RLFQ13129 1914 aa15.21■□□□□ 0.02
CDK5RAP3-205ENST00000577802 BTBD18B2RXH4 712 aa15.2■□□□□ 0.02
CDK5RAP3-205ENST00000577802 PPP1R11O60927 126 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-205ENST00000577802 BAG4O95429 457 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-205ENST00000577802 FOSP01100 380 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-205ENST00000577802 SLC10A3P09131 477 aa15.2■□□□□ 0.02
CDK5RAP3-205ENST00000577802 GJA5P36382 358 aa15.2■□□□□ 0.02
CDK5RAP3-205ENST00000577802 INHBEP58166 350 aa15.2■□□□□ 0.02
CDK5RAP3-205ENST00000577802 NONOQ15233 471 aaKnown RBP eCLIP15.2■□□□□ 0.02
CDK5RAP3-205ENST00000577802 PARK7Q99497 189 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-205ENST00000577802 RNF39Q9H2S5 420 aa15.2■□□□□ 0.02
CDK5RAP3-205ENST00000577802 ADAMTS5Q9UNA0 930 aa15.2■□□□□ 0.02
CDK5RAP3-205ENST00000577802 COL11A1P12107 1806 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-205ENST00000577802 BAZ2BQ9UIF8 2168 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-205ENST00000577802 PIK3CDO00329 1044 aa15.19■□□□□ 0.02
CDK5RAP3-205ENST00000577802 ORC2Q13416 577 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-205ENST00000577802 TYW1BQ6NUM6 668 aa15.19■□□□□ 0.02
CDK5RAP3-205ENST00000577802 ASCC2Q9H1I8 757 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-205ENST00000577802 FBXO40Q9UH90 709 aa15.19■□□□□ 0.02
CDK5RAP3-205ENST00000577802 SPDYE3A6NKU9 549 aa15.18■□□□□ 0.02
CDK5RAP3-205ENST00000577802 KIF28PB7ZC32 967 aa15.18■□□□□ 0.02
CDK5RAP3-205ENST00000577802 YEATS4O95619 227 aa15.18■□□□□ 0.02
CDK5RAP3-205ENST00000577802 GCLCP48506 637 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-205ENST00000577802 HERVK_113P62684 666 aa15.18■□□□□ 0.02
CDK5RAP3-205ENST00000577802 NR5A1Q13285 461 aa15.18■□□□□ 0.02
CDK5RAP3-205ENST00000577802 NPY5RQ15761 445 aa15.18■□□□□ 0.02
CDK5RAP3-205ENST00000577802 SNRNP48Q6IEG0 339 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-205ENST00000577802 REM2Q8IYK8 340 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-205ENST00000577802 JMYQ8N9B5 988 aa15.18■□□□□ 0.02
CDK5RAP3-205ENST00000577802 SMCR8Q8TEV9 937 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-205ENST00000577802 MS4A4AQ96JQ5 239 aa15.18■□□□□ 0.02
CDK5RAP3-205ENST00000577802 POLR3EQ9NVU0 708 aa15.18■□□□□ 0.02
CDK5RAP3-205ENST00000577802 RABGAP1Q9Y3P9 1069 aa15.18■□□□□ 0.02
CDK5RAP3-205ENST00000577802 ELP1O95163 1332 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 TESPA1A2RU30 521 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 GCOM1H8Y6P7 765 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 PDHXO00330 501 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 POLR2MP0CAP2 368 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 ALAS1P13196 640 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 SNAP25P60880 206 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 CCNA1P78396 465 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 DNM1Q05193 864 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 MOGSQ13724 837 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 PIK3AP1Q6ZUJ8 805 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 CPXCR1Q8N123 301 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 CHST13Q8NET6 341 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 KCNG4Q8TDN1 519 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 OXER1Q8TDS5 423 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 TNFRSF25Q93038 417 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 SHISA4Q96DD7 197 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 SPATA32Q96LK8 384 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 ACAD9Q9H845 621 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 RAVER2Q9HCJ3 691 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 CREBZFQ9NS37 354 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 ZNF214Q9UL59 606 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 PCDHA6Q9UN73 950 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 PCDHA8Q9Y5H6 950 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 ZNF536O15090 1300 aa15.17■□□□□ 0.02
CDK5RAP3-205ENST00000577802 M0R2N6 131 aa15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 FIBPO43427 364 aa15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 SLC25A27O95847 323 aa15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 CLK2P49760 499 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 GHRHRQ02643 423 aa15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 MKRN3Q13064 507 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 PLS1Q14651 629 aa15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 FOXD4L6Q3SYB3 417 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 GPAT2Q6NUI2 795 aa15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 FOXD4L3Q6VB84 417 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 NEK8Q86SG6 692 aa15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 TMEM87AQ8NBN3 555 aa15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 REPS2Q8NFH8 660 aa15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 BRI3BPQ8WY22 251 aa15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 RNF146Q9NTX7 359 aa15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 RTEL1Q9NZ71 1219 aa15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 PFASO15067 1338 aa15.16■□□□□ 0.02
CDK5RAP3-205ENST00000577802 BTBD19C9JJ37 291 aa15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 GCFC2P16383 781 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 MCM4P33991 863 aa15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 STAT3P40763 770 aa15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 NASPP49321 788 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-205ENST00000577802 APLP1P51693 650 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms