RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 NSMFQ6X4W1 530 aa16.79■□□□□ 0.28
SMARCD2-205ENST00000577686 AGBL1Q96MI9 1066 aa16.79■□□□□ 0.28
SMARCD2-205ENST00000577686 KATNBL1Q9H079 304 aa16.79■□□□□ 0.28
SMARCD2-205ENST00000577686 DNAH12Q6ZR08 3092 aa16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 RAD50Q92878 1312 aa16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 B4DLN1 442 aa16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 FGBP02675 491 aa16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 ICAM1P05362 532 aa16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 MRPL12P52815 198 aaKnown RBP16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 BEX3Q00994 111 aa16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 GRIN2CQ14957 1233 aa16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 TJAP1Q5JTD0 557 aa16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 CXCL17Q6UXB2 119 aa16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 KCTD1Q719H9 257 aa16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 RPUSD2Q8IZ73 545 aaKnown RBP16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 PI4K2BQ8TCG2 481 aa16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 SEC62Q99442 399 aaKnown RBP16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 TOMM22Q9NS69 142 aa16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 POLR3EQ9NVU0 708 aa16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 PRR12Q9ULL5 1215 aa16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.78■□□□□ 0.28
SMARCD2-205ENST00000577686 ZNF536O15090 1300 aa16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 SOWAHBA6NEL2 793 aa16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 DYNC1LI2O43237 492 aaPredicted RBP16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 ADCY6O43306 1168 aa16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 CD4P01730 458 aa16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 SUPT20HL2P0C7V6 817 aa16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 ZNF365Q70YC5 407 aa16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 TICAM2Q86XR7 235 aa16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 SLC43A3Q8NBI5 491 aa16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 IL27Q8NEV9 243 aa16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 HERVK_113Q902F9 699 aa16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 EVI5LQ96CN4 794 aa16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 GPHNQ9NQX3 736 aaPredicted RBP16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 CYP39A1Q9NYL5 469 aa16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 ANAPC4Q9UJX5 808 aa16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 GNEQ9Y223 722 aaKnown RBP16.77■□□□□ 0.28
SMARCD2-205ENST00000577686 ORC4O43929 436 aa16.76■□□□□ 0.27
SMARCD2-205ENST00000577686 CPT1AP50416 773 aa16.76■□□□□ 0.27
SMARCD2-205ENST00000577686 AKNAD1Q5T1N1 836 aa16.76■□□□□ 0.27
SMARCD2-205ENST00000577686 RASIP1Q5U651 963 aa16.76■□□□□ 0.27
SMARCD2-205ENST00000577686 KIAA1211Q6ZU35 1233 aa16.76■□□□□ 0.27
SMARCD2-205ENST00000577686 PBX4Q9BYU1 374 aa16.76■□□□□ 0.27
SMARCD2-205ENST00000577686 TSPYL2Q9H2G4 693 aaPredicted RBP16.76■□□□□ 0.27
SMARCD2-205ENST00000577686 SLC28A3Q9HAS3 691 aa16.76■□□□□ 0.27
SMARCD2-205ENST00000577686 HELLSQ9NRZ9 838 aa16.76■□□□□ 0.27
SMARCD2-205ENST00000577686 MTMR7Q9Y216 660 aa16.76■□□□□ 0.27
SMARCD2-205ENST00000577686 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.75■□□□□ 0.27
SMARCD2-205ENST00000577686 CTAGE5O15320 804 aa16.75■□□□□ 0.27
SMARCD2-205ENST00000577686 PFKMP08237 780 aa16.75■□□□□ 0.27
SMARCD2-205ENST00000577686 ACRP10323 421 aa16.75■□□□□ 0.27
SMARCD2-205ENST00000577686 TOP1P11387 765 aaKnown RBP16.75■□□□□ 0.27
SMARCD2-205ENST00000577686 SMPD1P17405 629 aa16.75■□□□□ 0.27
SMARCD2-205ENST00000577686 CYP2C18P33260 490 aa16.75■□□□□ 0.27
SMARCD2-205ENST00000577686 CTDSPL2Q05D32 466 aa16.75■□□□□ 0.27
SMARCD2-205ENST00000577686 SYDE2Q5VT97 1194 aa16.75■□□□□ 0.27
SMARCD2-205ENST00000577686 FBXO16Q8IX29 292 aaPredicted RBP16.75■□□□□ 0.27
SMARCD2-205ENST00000577686 RANBP17Q9H2T7 1088 aaKnown RBP16.75■□□□□ 0.27
SMARCD2-205ENST00000577686 PTPDC1A2A3K4 754 aa16.74■□□□□ 0.27
SMARCD2-205ENST00000577686 PCP11498 1178 aaKnown RBP16.74■□□□□ 0.27
SMARCD2-205ENST00000577686 IRX5P78411 483 aaPredicted RBP16.74■□□□□ 0.27
SMARCD2-205ENST00000577686 ALX1Q15699 326 aa16.74■□□□□ 0.27
SMARCD2-205ENST00000577686 EEPD1Q7L9B9 569 aa16.74■□□□□ 0.27
SMARCD2-205ENST00000577686 MORC4Q8TE76 937 aa16.74■□□□□ 0.27
SMARCD2-205ENST00000577686 CHMP4CQ96CF2 233 aa16.74■□□□□ 0.27
SMARCD2-205ENST00000577686 ASTN1O14525 1302 aa16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 NKRFO15226 690 aaKnown RBP eCLIP16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 KPNA6O60684 536 aa16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 ACTN1P12814 892 aa16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 NT5C2P49902 561 aa16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 ALDH5A1P51649 535 aaPredicted RBP16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 MFAP1P55081 439 aaKnown RBP16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 DUSP28Q4G0W2 176 aa16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 MUM1L1Q5H9M0 696 aa16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 RRP12Q5JTH9 1297 aaKnown RBP16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 BTNL9Q6UXG8 535 aa16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 C16orf59Q7L2K0 433 aa16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 ATXN2LQ8WWM7 1075 aaKnown RBP16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 NOC4LQ9BVI4 516 aaKnown RBP16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 IL17RBQ9NRM6 502 aa16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 THEGQ9P2T0 379 aa16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 SLC4A7Q9Y6M7 1214 aa16.73■□□□□ 0.27
SMARCD2-205ENST00000577686 ZBBXA8MT70 800 aa16.72■□□□□ 0.27
SMARCD2-205ENST00000577686 NOVP48745 357 aa16.72■□□□□ 0.27
SMARCD2-205ENST00000577686 CCL23P55773 120 aa16.72■□□□□ 0.27
SMARCD2-205ENST00000577686 PDE4DQ08499 809 aa16.72■□□□□ 0.27
SMARCD2-205ENST00000577686 BAATQ14032 418 aaPredicted RBP16.72■□□□□ 0.27
SMARCD2-205ENST00000577686 PPP2R5BQ15173 497 aa16.72■□□□□ 0.27
SMARCD2-205ENST00000577686 ANKRD45Q5TZF3 282 aa16.72■□□□□ 0.27
SMARCD2-205ENST00000577686 TAPT1Q6NXT6 567 aa16.72■□□□□ 0.27
SMARCD2-205ENST00000577686 MTG1Q9BT17 334 aaPredicted RBP16.72■□□□□ 0.27
SMARCD2-205ENST00000577686 WDR11Q9BZH6 1224 aa16.72■□□□□ 0.27
SMARCD2-205ENST00000577686 RNF41Q9H4P4 317 aaPredicted RBP16.72■□□□□ 0.27
SMARCD2-205ENST00000577686 PRDM12Q9H4Q4 367 aa16.72■□□□□ 0.27
SMARCD2-205ENST00000577686 PRDM6Q9NQX0 595 aa16.72■□□□□ 0.27
SMARCD2-205ENST00000577686 TCP11L1Q9NUJ3 509 aa16.72■□□□□ 0.27
SMARCD2-205ENST00000577686 A0A0C4DFX4 3053 aa16.72■□□□□ 0.27
SMARCD2-205ENST00000577686 ZMYM6O95789 1325 aa16.71■□□□□ 0.27
SMARCD2-205ENST00000577686 GRXCR1A8MXD5 290 aa16.71■□□□□ 0.27
SMARCD2-205ENST00000577686 B4GALT4O60513 344 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms