RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 ADAMTS5Q9UNA0 930 aa8.32□□□□□ -1.08
CASC3-205ENST00000577605 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.32□□□□□ -1.08
CASC3-205ENST00000577605 SIPA1L1O43166 1804 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 LOC285556D6RIA3 1793 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 ZBED4O75132 1171 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 HMGCRP04035 888 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 GJB1P08034 283 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 ABL2P42684 1182 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 OAZ1P54368 228 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 IRX6P78412 446 aaPredicted RBP8.31□□□□□ -1.08
CASC3-205ENST00000577605 CAP1Q01518 475 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 IMMTQ16891 758 aaKnown RBP8.31□□□□□ -1.08
CASC3-205ENST00000577605 Q3C1V9 767 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 AKNAD1Q5T1N1 836 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 VPS53Q5VIR6 699 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 CCDC129Q6ZRS4 1044 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 GPR142Q7Z601 462 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 FAM160B2Q86V87 743 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 CHURC1Q8WUH1 139 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 STAG1Q8WVM7 1258 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 ESR2Q92731 530 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 CEP95Q96GE4 821 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 PAGR1Q9BTK6 254 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 KRT23Q9C075 422 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 CNNM2Q9H8M5 875 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 TXNRD2Q9NNW7 524 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 PPP1R9AQ9ULJ8 1098 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 GABRQQ9UN88 632 aa8.31□□□□□ -1.08
CASC3-205ENST00000577605 CTDP1Q9Y5B0 961 aaPredicted RBP8.31□□□□□ -1.08
CASC3-205ENST00000577605 V9GY48 417 aaPredicted RBP8.31□□□□□ -1.08
CASC3-205ENST00000577605 NAV1Q8NEY1 1877 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 VWA5AO00534 786 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 ATP2A1O14983 1001 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 FOXP2O15409 715 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 RANBP6O60518 1105 aaKnown RBP8.3□□□□□ -1.08
CASC3-205ENST00000577605 PRDM1O75626 825 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 CNMDO75829 334 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 HOXC6P09630 235 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 BMP3P12645 472 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 GJA8P48165 433 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 SOX10P56693 466 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 RNF19BQ6ZMZ0 732 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 IQCA1Q86XH1 822 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 DGKHQ86XP1 1220 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 RIOX2Q8IUF8 465 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 SPICE1Q8N0Z3 855 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 SH3TC2Q8TF17 1288 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 USP6NLQ92738 828 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 HLA-CQ95604 372 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 APBA2Q99767 749 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 SLF1Q9BQI6 1058 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 SPATC1LQ9H0A9 340 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 FBXO40Q9UH90 709 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 STX8Q9UNK0 236 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 PHIPQ8WWQ0 1821 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 MYH1P12882 1939 aa8.3□□□□□ -1.08
CASC3-205ENST00000577605 RPTORQ8N122 1335 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.29□□□□□ -1.08
CASC3-205ENST00000577605 HOXA2O43364 376 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 MSCO60682 206 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 NDUFB10O96000 172 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 CENPBP07199 599 aaPredicted RBP8.29□□□□□ -1.08
CASC3-205ENST00000577605 TOP1P11387 765 aaKnown RBP8.29□□□□□ -1.08
CASC3-205ENST00000577605 FCER1AP12319 257 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 CCL5P13501 91 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 GSPT1P15170 499 aaKnown RBP8.29□□□□□ -1.08
CASC3-205ENST00000577605 ZKSCAN1P17029 563 aaPredicted RBP8.29□□□□□ -1.08
CASC3-205ENST00000577605 CHMLP26374 656 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 STAT3P40763 770 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 SLC1A4P43007 532 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 STAT2P52630 851 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 USP46P62068 366 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 CTDSPL2Q05D32 466 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 TRDNQ13061 729 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 GRB14Q14449 540 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 FAM47AQ5JRC9 791 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 FAM83BQ5T0W9 1011 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 MFSD14CQ5VZR4 134 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 SLFN13Q68D06 897 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 CASC1Q6TDU7 716 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 KIAA1211Q6ZU35 1233 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 ZNF589Q86UQ0 364 aaPredicted RBP8.29□□□□□ -1.08
CASC3-205ENST00000577605 STK11IPQ8N1F8 1099 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 ANKLE1Q8NAG6 615 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 DCAF4Q8WV16 495 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 MOV10L1Q9BXT6 1211 aaKnown RBP8.29□□□□□ -1.08
CASC3-205ENST00000577605 TEX13BQ9BXU2 312 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 MAF1Q9H063 256 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 RNF208Q9H0X6 261 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 HMX1Q9NP08 348 aaPredicted RBP8.29□□□□□ -1.08
CASC3-205ENST00000577605 TOMM22Q9NS69 142 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 BTBD7Q9P203 1132 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 NRBP1Q9UHY1 535 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 DIS3Q9Y2L1 958 aaKnown RBP8.29□□□□□ -1.08
CASC3-205ENST00000577605 MYO5AQ9Y4I1 1855 aaKnown RBP8.29□□□□□ -1.08
CASC3-205ENST00000577605 CASP8AP2Q9UKL3 1982 aa8.29□□□□□ -1.08
CASC3-205ENST00000577605 CDK5RAP2Q96SN8 1893 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 SMIM22K7EJ46 135 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 SGPL1O95470 568 aa8.28□□□□□ -1.08
CASC3-205ENST00000577605 INHAP05111 366 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms