RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 FEM1BQ9UK73 627 aa12.1□□□□□ -0.47
NPLOC4-220ENST00000576940 CABYRO75952 493 aa12.09□□□□□ -0.47
NPLOC4-220ENST00000576940 TTLL4Q14679 1199 aa12.09□□□□□ -0.47
NPLOC4-220ENST00000576940 SLFN13Q68D06 897 aa12.09□□□□□ -0.47
NPLOC4-220ENST00000576940 KRT40Q6A162 431 aa12.09□□□□□ -0.47
NPLOC4-220ENST00000576940 TAPT1Q6NXT6 567 aa12.09□□□□□ -0.47
NPLOC4-220ENST00000576940 TLK2Q86UE8 772 aa12.09□□□□□ -0.47
NPLOC4-220ENST00000576940 RPAP2Q8IXW5 612 aaPredicted RBP12.09□□□□□ -0.47
NPLOC4-220ENST00000576940 ZNF444Q8N0Y2 327 aaPredicted RBP12.09□□□□□ -0.47
NPLOC4-220ENST00000576940 CEP95Q96GE4 821 aa12.09□□□□□ -0.47
NPLOC4-220ENST00000576940 PURBQ96QR8 312 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-220ENST00000576940 AP5M1Q9H0R1 490 aa12.09□□□□□ -0.47
NPLOC4-220ENST00000576940 A1CFQ9NQ94 594 aaKnown RBP12.09□□□□□ -0.47
NPLOC4-220ENST00000576940 PCDHA11Q9Y5I1 949 aa12.09□□□□□ -0.47
NPLOC4-220ENST00000576940 MTCH2Q9Y6C9 303 aa12.09□□□□□ -0.47
NPLOC4-220ENST00000576940 TMEM232C9JQI7 657 aa12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 RAB11FIP3O75154 756 aa12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 CA3P07451 260 aa12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 CYP2C9P11712 490 aa12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 BMP3P12645 472 aa12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 ATP2A2P16615 1042 aaKnown RBP12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 OAZ1P54368 228 aa12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 SNAP25P60880 206 aa12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 ZSCAN25Q6NSZ9 544 aa12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 DEFB128Q7Z7B8 93 aa12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 LRFN3Q9BTN0 628 aa12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 ACAD9Q9H845 621 aa12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 RNF146Q9NTX7 359 aa12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 TRMT13Q9NUP7 481 aaKnown RBP12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 MTMR4Q9NYA4 1195 aa12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 COG6Q9Y2V7 657 aa12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 PRRC2BQ5JSZ5 2229 aaKnown RBP12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 ZNF536O15090 1300 aa12.08□□□□□ -0.48
NPLOC4-220ENST00000576940 GREB1LQ9C091 1923 aaPredicted RBP12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 EPOPA6NHQ4 379 aa12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 ASB14A6NK59 587 aa12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 ERC2O15083 957 aa12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 SMARCA5O60264 1052 aaPredicted RBP12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 ZEB2O60315 1214 aa12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 AAK1Q2M2I8 961 aa12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 TMEM67Q5HYA8 995 aa12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 IQSEC1Q6DN90 963 aa12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 KIAA1211Q6ZU35 1233 aa12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 FBXO16Q8IX29 292 aaPredicted RBP12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 PPP1R13LQ8WUF5 828 aa12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 OSBP2Q969R2 916 aa12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 TRERF1Q96PN7 1200 aa12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 ALDH8A1Q9H2A2 487 aaPredicted RBP12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 ISY1Q9ULR0 285 aaKnown RBP12.07□□□□□ -0.48
NPLOC4-220ENST00000576940 TLL1O43897 1013 aa12.06□□□□□ -0.48
NPLOC4-220ENST00000576940 HMMRO75330 724 aa12.06□□□□□ -0.48
NPLOC4-220ENST00000576940 ARHGEF15O94989 841 aa12.06□□□□□ -0.48
NPLOC4-220ENST00000576940 TTLL1O95922 423 aa12.06□□□□□ -0.48
NPLOC4-220ENST00000576940 ALAS1P13196 640 aa12.06□□□□□ -0.48
NPLOC4-220ENST00000576940 POU3F3P20264 500 aaPredicted RBP12.06□□□□□ -0.48
NPLOC4-220ENST00000576940 MUM1L1Q5H9M0 696 aa12.06□□□□□ -0.48
NPLOC4-220ENST00000576940 GMCL1P1Q8NEA9 526 aa12.06□□□□□ -0.48
NPLOC4-220ENST00000576940 ARNTL2Q8WYA1 636 aa12.06□□□□□ -0.48
NPLOC4-220ENST00000576940 KHSRPQ92945 711 aaKnown RBP eCLIP12.06□□□□□ -0.48
NPLOC4-220ENST00000576940 EPB41L4AQ9HCS5 686 aaPredicted RBP12.06□□□□□ -0.48
NPLOC4-220ENST00000576940 MYH4Q9Y623 1939 aa12.05□□□□□ -0.48
NPLOC4-220ENST00000576940 GTPBP6O43824 516 aaPredicted RBP12.05□□□□□ -0.48
NPLOC4-220ENST00000576940 APPP05067 770 aa12.05□□□□□ -0.48
NPLOC4-220ENST00000576940 MCCP23508 829 aa12.05□□□□□ -0.48
NPLOC4-220ENST00000576940 STAT2P52630 851 aa12.05□□□□□ -0.48
NPLOC4-220ENST00000576940 GIMAP6Q6P9H5 292 aa12.05□□□□□ -0.48
NPLOC4-220ENST00000576940 STAG1Q8WVM7 1258 aa12.05□□□□□ -0.48
NPLOC4-220ENST00000576940 SEZ6LQ9BYH1 1024 aa12.05□□□□□ -0.48
NPLOC4-220ENST00000576940 ZBTB40Q9NUA8 1239 aa12.05□□□□□ -0.48
NPLOC4-220ENST00000576940 Q9Y3F1 56 aa12.05□□□□□ -0.48
NPLOC4-220ENST00000576940 MYL3P08590 195 aa12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 TSPY3P0CV98 308 aa12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 TSPY8P0CW00 308 aa12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 FDX1P10109 184 aa12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 SLC1A4P43007 532 aa12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 TDO2P48775 406 aa12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 TFAP4Q01664 338 aa12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 IKQ13123 557 aaPredicted RBP12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 KCTD1Q719H9 257 aa12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 SPRED2Q7Z698 418 aa12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 IFNL3Q8IZI9 196 aa12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 NEDD1Q8NHV4 660 aa12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 CHURC1Q8WUH1 139 aa12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 CYP39A1Q9NYL5 469 aa12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 COG5Q9UP83 839 aa12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 TNKSO95271 1327 aa12.04□□□□□ -0.48
NPLOC4-220ENST00000576940 SCN5AQ14524 2016 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 TRANK1O15050 2925 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 PATL2C9JE40 543 aaKnown RBP12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 RBAK-RBAKDNI3L0D1 243 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 M0R2C6 588 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 RNF113AO15541 343 aaKnown RBP12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 GPAA1O43292 621 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 SUPT20HL2P0C7V6 817 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 HNRNPUQ00839 825 aaKnown RBP eCLIP12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 TAP1Q03518 808 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 TKFCQ3LXA3 575 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 DUSP28Q4G0W2 176 aa12.03□□□□□ -0.48
NPLOC4-220ENST00000576940 TMEM31Q5JXX7 168 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms