RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 RIPK3Q9Y572 518 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 MYH6P13533 1939 aa9.85□□□□□ -0.83
PRPF8-213ENST00000576407 ABCB11O95342 1321 aa9.84□□□□□ -0.83
PRPF8-213ENST00000576407 hCG_1984214I3L0E3 225 aa9.84□□□□□ -0.83
PRPF8-213ENST00000576407 STXBP3O00186 592 aa9.84□□□□□ -0.83
PRPF8-213ENST00000576407 ALAS1P13196 640 aa9.84□□□□□ -0.83
PRPF8-213ENST00000576407 CCNA1P78396 465 aa9.84□□□□□ -0.83
PRPF8-213ENST00000576407 MAP2K1Q02750 393 aaPredicted RBP9.84□□□□□ -0.83
PRPF8-213ENST00000576407 TRAF1Q13077 416 aa9.84□□□□□ -0.83
PRPF8-213ENST00000576407 TYW1BQ6NUM6 668 aa9.84□□□□□ -0.83
PRPF8-213ENST00000576407 ZNF713Q8N859 430 aaPredicted RBP9.84□□□□□ -0.83
PRPF8-213ENST00000576407 FAM184AQ8NB25 1140 aa9.84□□□□□ -0.83
PRPF8-213ENST00000576407 SHISA4Q96DD7 197 aa9.84□□□□□ -0.83
PRPF8-213ENST00000576407 TRERF1Q96PN7 1200 aa9.84□□□□□ -0.83
PRPF8-213ENST00000576407 PORCNQ9H237 461 aa9.84□□□□□ -0.83
PRPF8-213ENST00000576407 HOMER2Q9NSB8 354 aa9.84□□□□□ -0.83
PRPF8-213ENST00000576407 GJB4Q9NTQ9 266 aa9.84□□□□□ -0.83
PRPF8-213ENST00000576407 VPS54Q9P1Q0 977 aa9.84□□□□□ -0.83
PRPF8-213ENST00000576407 KIF3AQ9Y496 699 aa9.84□□□□□ -0.83
PRPF8-213ENST00000576407 PCNTO95613 3336 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 SLC25A27O95847 323 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 ERCC3P19447 782 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 FOSBP53539 338 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 NAPAP54920 295 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 NBR1Q14596 966 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 TKFCQ3LXA3 575 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 MUM1L1Q5H9M0 696 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 PPP1R18Q6NYC8 613 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 NCAPG2Q86XI2 1143 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 SHCBP1Q8NEM2 672 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 CLEC4DQ8WXI8 215 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 BEGAINQ9BUH8 593 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 SH3GLB2Q9NR46 395 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 RNF146Q9NTX7 359 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 SAGE1Q9NXZ1 904 aa9.83□□□□□ -0.84
PRPF8-213ENST00000576407 MRPL11Q9Y3B7 192 aaKnown RBP9.83□□□□□ -0.84
PRPF8-213ENST00000576407 SMCHD1A6NHR9 2005 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 SMCO2A6NFE2 343 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 NFIBO00712 420 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 OPLAHO14841 1288 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 XBP1P17861 261 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 COPB2P35606 906 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 TRIM29Q14134 588 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 GSE1Q14687 1217 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 LARP1BQ659C4 914 aaKnown RBP9.82□□□□□ -0.84
PRPF8-213ENST00000576407 CCAR1Q8IX12 1150 aaKnown RBP9.82□□□□□ -0.84
PRPF8-213ENST00000576407 CHST13Q8NET6 341 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 CCDC148Q8NFR7 591 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 CCDC12Q8WUD4 166 aaPredicted RBP9.82□□□□□ -0.84
PRPF8-213ENST00000576407 C8orf76Q96K31 380 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 ZMYND12Q9H0C1 365 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 MROH8Q9H579 483 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 ACAD9Q9H845 621 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 PSTPIP2Q9H939 334 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 EFCC1Q9HA90 598 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 WBP1LQ9NX94 342 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 FBXO40Q9UH90 709 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 KCNJ14Q9UNX9 436 aa9.82□□□□□ -0.84
PRPF8-213ENST00000576407 ESYT2A0FGR8 921 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 CAPN15O75808 1086 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 ECM2O94769 699 aaPredicted RBP9.81□□□□□ -0.84
PRPF8-213ENST00000576407 PDCP20941 246 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 MAPK4P31152 587 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 ADCY7P51828 1080 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 NLRP5P59047 1200 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 GUCY1B3Q02153 619 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 WDR78Q5VTH9 848 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 KRT40Q6A162 431 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 MCF2L2Q86YR7 1114 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 FAM177A1Q8N128 213 aaPredicted RBP9.81□□□□□ -0.84
PRPF8-213ENST00000576407 JMYQ8N9B5 988 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 FBXO18Q8NFZ0 1043 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 TBC1D5Q92609 795 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 CUL5Q93034 780 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 PHF20Q9BVI0 1012 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 CWC22Q9HCG8 908 aaKnown RBP9.81□□□□□ -0.84
PRPF8-213ENST00000576407 RIC8AQ9NPQ8 531 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 TSKSQ9UJT2 592 aa9.81□□□□□ -0.84
PRPF8-213ENST00000576407 GPR25O00155 361 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 MEIS2O14770 477 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 ADAMTS3O15072 1205 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 RRP9O43818 475 aaKnown RBP9.8□□□□□ -0.84
PRPF8-213ENST00000576407 CFBP00751 764 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 MMP1P03956 469 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 FCER1AP12319 257 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 SYT1P21579 422 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 CALML3P27482 149 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 CTGFP29279 349 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 GNA11P29992 359 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 HOXA13P31271 388 aaPredicted RBP9.8□□□□□ -0.84
PRPF8-213ENST00000576407 HSD17B4P51659 736 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 MRPL12P52815 198 aaKnown RBP9.8□□□□□ -0.84
PRPF8-213ENST00000576407 LACTBP83111 547 aaPredicted RBP9.8□□□□□ -0.84
PRPF8-213ENST00000576407 SP3Q02447 781 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 GHRHRQ02643 423 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 NPY5RQ15761 445 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 NOM1Q5C9Z4 860 aaKnown RBP9.8□□□□□ -0.84
PRPF8-213ENST00000576407 GALNT17Q6IS24 598 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 USP17L6PQ6QN14 398 aa9.8□□□□□ -0.84
PRPF8-213ENST00000576407 NSMFQ6X4W1 530 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms