RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 MAGEF1Q9HAY2 307 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 TMEM51Q9NW97 253 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 KIF28PB7ZC32 967 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 CCNE1P24864 410 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 MUM1Q2TAK8 710 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 FUT8Q9BYC5 575 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 FAM114A2Q9NRY5 505 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 CDC42BPBQ9Y5S2 1711 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 SMCO2A6NFE2 343 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 RBBP5Q15291 538 aaKnown RBP14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 MAN2A1Q16706 1144 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 TC2NQ8N9U0 490 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 GPKOWQ92917 476 aaPredicted RBP eCLIP14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 CUEDC2Q9H467 287 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 PHKG2P15735 406 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 ATP2A2P16615 1042 aaKnown RBP14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 KRT15P19012 456 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 PICALMQ13492 652 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 STAG1Q8WVM7 1258 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 KLHL29Q96CT2 875 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 BICD1Q96G01 975 aa14.42□□□□□ -0.1
PCDHGB3-201ENST00000576222 DDAH1O94760 285 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 IGKV5-2P06315 115 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 XRCC5P13010 732 aaKnown RBP14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 DHX9Q08211 1270 aaKnown RBP14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 GLE1Q53GS7 698 aaKnown RBP14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 REXO1L1PQ8IX06 675 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 ARMCX3Q9UH62 379 aaPredicted RBP14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 ATP8A1Q9Y2Q0 1164 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 GDAQ9Y2T3 454 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 PLCG2P16885 1265 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 EXOSC10Q01780 885 aaKnown RBP14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 GPCPD1Q9NPB8 672 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 TUBE1Q9UJT0 475 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 ADCY7P51828 1080 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 ARHGAP24Q8N264 748 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 CNOT10Q9H9A5 744 aaKnown RBP14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 LRRIQ1Q96JM4 1722 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 LRRD1A4D1F6 860 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 LGALS16A8MUM7 142 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 PGRMC1O00264 195 aaKnown RBP14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 CTSWP56202 376 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 CCDC62Q6P9F0 684 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 HNRNPLLQ8WVV9 542 aaKnown RBP14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 RFX7Q2KHR2 1363 aa14.41□□□□□ -0.1
PCDHGB3-201ENST00000576222 ABCC3O15438 1527 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 TARSL2A2RTX5 802 aaKnown RBP14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 MYL1P05976 194 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 CORO7P57737 925 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 ACTN3Q08043 901 aaPredicted RBP14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 UAP1Q16222 522 aaPredicted RBP14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 USPL1Q5W0Q7 1092 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 SAP30BPQ9UHR5 308 aaKnown RBP14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 PDE8BO95263 885 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 PCCAP05165 728 aaPredicted RBP14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 DNAJC10Q8IXB1 793 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 MB21D2Q8IYB1 491 aaPredicted RBP14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 PLAAQ9Y263 795 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 PCDHB13Q9Y5F0 798 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 TAF6LQ9Y6J9 622 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 ABCA6Q8N139 1617 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 TTC26A0AVF1 554 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 FAM170AA1A519 330 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 GAS8O95995 478 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 FAM133BQ5BKY9 247 aaKnown RBP14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 FAM26FQ5R3K3 315 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 PPP4R3AQ6IN85 833 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 NT5C3AQ9H0P0 336 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 ABCC12Q96J65 1359 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 E9PCH4 1651 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 N4BP1O75113 896 aaKnown RBP14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 ATP1A1P05023 1023 aaKnown RBP14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 TRAF1Q13077 416 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 FBXW10Q5XX13 1052 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 NEK8Q86SG6 692 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 GBP5Q96PP8 586 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 SUGCTQ9HAC7 445 aa14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 BIN2Q9UBW5 565 aaPredicted RBP14.4□□□□□ -0.1
PCDHGB3-201ENST00000576222 A0A1B0GTH6 734 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 ARHGAP44Q17R89 818 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 ANKRD20A3Q5VUR7 823 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 RASGRP2Q7LDG7 609 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 CADPS2Q86UW7 1296 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 ZBTB38Q8NAP3 1195 aaPredicted RBP14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 PNMA1Q8ND90 353 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 RIN2Q8WYP3 895 aaPredicted RBP14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 ORAI2Q96SN7 254 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 DNM3Q9UQ16 869 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 DAAM1Q9Y4D1 1078 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 GALNT17Q6IS24 598 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 RAD9BQ6WBX8 426 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 ZNF622Q969S3 477 aaKnown RBP eCLIP14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 UIMC1Q96RL1 719 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 ATG3Q9NT62 314 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 CD2APQ9Y5K6 639 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 SPHKAPQ2M3C7 1700 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 HIBADHP31937 336 aaKnown RBP14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 FMR1Q06787 632 aaKnown RBP eCLIP14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 CUL4BQ13620 913 aa14.39□□□□□ -0.11
PCDHGB3-201ENST00000576222 YEATS2Q9ULM3 1422 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms