RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	CCDC69	A6NI79	296 aa		29.46	■■■□□ 2.31
SRRM2-223	ENST00000575701	NFXL1	Q6ZNB6	911 aa		29.46	■■■□□ 2.31
SRRM2-223	ENST00000575701	RASEF	Q8IZ41	740 aa		29.46	■■■□□ 2.31
SRRM2-223	ENST00000575701	FGD4	Q96M96	766 aa		29.46	■■■□□ 2.31
SRRM2-223	ENST00000575701	HTATIP2	Q9BUP3	242 aa		29.46	■■■□□ 2.31
SRRM2-223	ENST00000575701	CALM1	P0DP23	149 aa		29.45	■■■□□ 2.31
SRRM2-223	ENST00000575701	CALM2	P0DP24	149 aa		29.45	■■■□□ 2.31
SRRM2-223	ENST00000575701	CALM3	P0DP25	149 aa		29.45	■■■□□ 2.31
SRRM2-223	ENST00000575701	KIF5B	P33176	963 aa		29.45	■■■□□ 2.31
SRRM2-223	ENST00000575701	QRICH1	Q2TAL8	776 aa		29.45	■■■□□ 2.31
SRRM2-223	ENST00000575701	DHX32	Q7L7V1	743 aa	Known RBP	29.45	■■■□□ 2.31
SRRM2-223	ENST00000575701	CTCFL	Q8NI51	663 aa	Predicted RBP	29.45	■■■□□ 2.31
SRRM2-223	ENST00000575701	CLEC4D	Q8WXI8	215 aa		29.45	■■■□□ 2.31
SRRM2-223	ENST00000575701	MYH6	P13533	1939 aa		29.44	■■■□□ 2.3
SRRM2-223	ENST00000575701	ASB14	A6NK59	587 aa		29.44	■■■□□ 2.3
SRRM2-223	ENST00000575701	NFIB	O00712	420 aa		29.44	■■■□□ 2.3
SRRM2-223	ENST00000575701	TAL1	P17542	331 aa	Predicted RBP	29.44	■■■□□ 2.3
SRRM2-223	ENST00000575701	CNTN2	Q02246	1040 aa		29.44	■■■□□ 2.3
SRRM2-223	ENST00000575701	USH1G	Q495M9	461 aa		29.44	■■■□□ 2.3
SRRM2-223	ENST00000575701	PRAMEF19	Q5SWL8	479 aa		29.44	■■■□□ 2.3
SRRM2-223	ENST00000575701	NECAB2	Q7Z6G3	386 aa		29.44	■■■□□ 2.3
SRRM2-223	ENST00000575701	FBXO11	Q86XK2	927 aa		29.44	■■■□□ 2.3
SRRM2-223	ENST00000575701	RGS22	Q8NE09	1264 aa		29.44	■■■□□ 2.3
SRRM2-223	ENST00000575701	MTMR8	Q96EF0	704 aa		29.44	■■■□□ 2.3
SRRM2-223	ENST00000575701	VAT1L	Q9HCJ6	419 aa		29.44	■■■□□ 2.3
SRRM2-223	ENST00000575701	ADD3	Q9UEY8	706 aa	Known RBP	29.44	■■■□□ 2.3
SRRM2-223	ENST00000575701	TNRC18	O15417	2968 aa	Predicted RBP	29.44	■■■□□ 2.3
SRRM2-223	ENST00000575701	SMCHD1	A6NHR9	2005 aa		29.44	■■■□□ 2.3
SRRM2-223	ENST00000575701	LOC102724159	A0A0B4J2E5	919 aa		29.43	■■■□□ 2.3
SRRM2-223	ENST00000575701	TRAF1	Q13077	416 aa		29.43	■■■□□ 2.3
SRRM2-223	ENST00000575701	PWP2	Q15269	919 aa	Known RBP	29.43	■■■□□ 2.3
SRRM2-223	ENST00000575701	RNF207	Q6ZRF8	634 aa		29.43	■■■□□ 2.3
SRRM2-223	ENST00000575701	ARMCX2	Q7L311	632 aa		29.43	■■■□□ 2.3
SRRM2-223	ENST00000575701	SGMS1	Q86VZ5	419 aa		29.43	■■■□□ 2.3
SRRM2-223	ENST00000575701	NUP133	Q8WUM0	1156 aa		29.43	■■■□□ 2.3
SRRM2-223	ENST00000575701	ABHD16B	Q9H3Z7	469 aa		29.43	■■■□□ 2.3
SRRM2-223	ENST00000575701	RIOX1	Q9H6W3	641 aa		29.43	■■■□□ 2.3
SRRM2-223	ENST00000575701	GPHN	Q9NQX3	736 aa	Predicted RBP	29.43	■■■□□ 2.3
SRRM2-223	ENST00000575701	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	29.43	■■■□□ 2.3
SRRM2-223	ENST00000575701	ZBTB5	O15062	677 aa		29.42	■■■□□ 2.3
SRRM2-223	ENST00000575701	SNAI1	O95863	264 aa	Predicted RBP	29.42	■■■□□ 2.3
SRRM2-223	ENST00000575701	ZNF865	P0CJ78	1059 aa	Predicted RBP	29.42	■■■□□ 2.3
SRRM2-223	ENST00000575701	AKR1A1	P14550	325 aa		29.42	■■■□□ 2.3
SRRM2-223	ENST00000575701	BAAT	Q14032	418 aa	Predicted RBP	29.42	■■■□□ 2.3
SRRM2-223	ENST00000575701	ADCK5	Q3MIX3	580 aa		29.42	■■■□□ 2.3
SRRM2-223	ENST00000575701	PAWR	Q96IZ0	340 aa	Known RBP	29.42	■■■□□ 2.3
SRRM2-223	ENST00000575701	AMN	Q9BXJ7	453 aa		29.42	■■■□□ 2.3
SRRM2-223	ENST00000575701	SLC12A7	Q9Y666	1083 aa		29.42	■■■□□ 2.3
SRRM2-223	ENST00000575701	PTPDC1	A2A3K4	754 aa		29.41	■■■□□ 2.3
SRRM2-223	ENST00000575701	SOWAHB	A6NEL2	793 aa		29.41	■■■□□ 2.3
SRRM2-223	ENST00000575701	GNAQ	P50148	359 aa		29.41	■■■□□ 2.3
SRRM2-223	ENST00000575701	EXOSC10	Q01780	885 aa	Known RBP	29.41	■■■□□ 2.3
SRRM2-223	ENST00000575701	COL9A3	Q14050	684 aa	Predicted RBP	29.41	■■■□□ 2.3
SRRM2-223	ENST00000575701	CCDC144CP	Q8IYA2	1237 aa		29.41	■■■□□ 2.3
SRRM2-223	ENST00000575701	LZTS2	Q9BRK4	669 aa		29.41	■■■□□ 2.3
SRRM2-223	ENST00000575701	MRPL11	Q9Y3B7	192 aa	Known RBP	29.41	■■■□□ 2.3
SRRM2-223	ENST00000575701	LCT	P09848	1927 aa		29.41	■■■□□ 2.3
SRRM2-223	ENST00000575701	SMARCA1	P28370	1054 aa		29.4	■■■□□ 2.3
SRRM2-223	ENST00000575701	MNX1	P50219	401 aa	Predicted RBP	29.4	■■■□□ 2.3
SRRM2-223	ENST00000575701	MCF2L2	Q86YR7	1114 aa		29.4	■■■□□ 2.3
SRRM2-223	ENST00000575701	ARRDC4	Q8NCT1	418 aa		29.4	■■■□□ 2.3
SRRM2-223	ENST00000575701	LRRC2	Q9BYS8	371 aa		29.4	■■■□□ 2.3
SRRM2-223	ENST00000575701	SNX14	Q9Y5W7	946 aa		29.4	■■■□□ 2.3
SRRM2-223	ENST00000575701	MKI67	P46013	3256 aa	Known RBP	29.39	■■■□□ 2.3
SRRM2-223	ENST00000575701	RARB	P10826	455 aa		29.39	■■■□□ 2.3
SRRM2-223	ENST00000575701	ACVR2B	Q13705	512 aa		29.39	■■■□□ 2.3
SRRM2-223	ENST00000575701	SYNE3	Q6ZMZ3	975 aa		29.39	■■■□□ 2.3
SRRM2-223	ENST00000575701	DIS3L	Q8TF46	1054 aa	Known RBP	29.39	■■■□□ 2.3
SRRM2-223	ENST00000575701	MYL10	Q9BUA6	226 aa		29.39	■■■□□ 2.3
SRRM2-223	ENST00000575701	SPZ1	Q9BXG8	430 aa		29.39	■■■□□ 2.3
SRRM2-223	ENST00000575701	C11orf49	Q9H6J7	331 aa		29.39	■■■□□ 2.3
SRRM2-223	ENST00000575701	ZHX1	Q9UKY1	873 aa	Predicted RBP	29.39	■■■□□ 2.3
SRRM2-223	ENST00000575701	FAM184B	Q9ULE4	1060 aa		29.39	■■■□□ 2.3
SRRM2-223	ENST00000575701	RPS6	P62753	249 aa	Known RBP	29.38	■■■□□ 2.29
SRRM2-223	ENST00000575701	SLC30A10	Q6XR72	485 aa		29.38	■■■□□ 2.29
SRRM2-223	ENST00000575701	MPHOSPH6	Q99547	160 aa	Known RBP	29.38	■■■□□ 2.29
SRRM2-223	ENST00000575701	MCM3AP	O60318	1980 aa		29.37	■■■□□ 2.29
SRRM2-223	ENST00000575701	PDE4DIP	Q5VU43	2346 aa		29.37	■■■□□ 2.29
SRRM2-223	ENST00000575701	DNM1L	O00429	736 aa		29.37	■■■□□ 2.29
SRRM2-223	ENST00000575701	CYTH3	O43739	400 aa		29.37	■■■□□ 2.29
SRRM2-223	ENST00000575701	EIF5B	O60841	1220 aa	Known RBP	29.37	■■■□□ 2.29
SRRM2-223	ENST00000575701	CALML3	P27482	149 aa		29.37	■■■□□ 2.29
SRRM2-223	ENST00000575701	HOMER1	Q86YM7	354 aa		29.37	■■■□□ 2.29
SRRM2-223	ENST00000575701	DNER	Q8NFT8	737 aa		29.37	■■■□□ 2.29
SRRM2-223	ENST00000575701	MORC4	Q8TE76	937 aa		29.37	■■■□□ 2.29
SRRM2-223	ENST00000575701	JAKMIP1	Q96N16	626 aa	Known RBP	29.37	■■■□□ 2.29
SRRM2-223	ENST00000575701	ASTN1	O14525	1302 aa		29.37	■■■□□ 2.29
SRRM2-223	ENST00000575701	LRRC37A2	A6NM11	1700 aa		29.37	■■■□□ 2.29
SRRM2-223	ENST00000575701	PSMA5	P28066	241 aa		29.36	■■■□□ 2.29
SRRM2-223	ENST00000575701	ALDH5A1	P51649	535 aa	Predicted RBP	29.36	■■■□□ 2.29
SRRM2-223	ENST00000575701	SLC35G1	Q2M3R5	365 aa		29.36	■■■□□ 2.29
SRRM2-223	ENST00000575701	BLOC1S2	Q6QNY1	142 aa		29.36	■■■□□ 2.29
SRRM2-223	ENST00000575701	PIGS	Q96S52	555 aa		29.36	■■■□□ 2.29
SRRM2-223	ENST00000575701	PNMA6F	A0A0J9YX94	578 aa		29.35	■■■□□ 2.29
SRRM2-223	ENST00000575701		B4DLN1	442 aa		29.35	■■■□□ 2.29
SRRM2-223	ENST00000575701	COL6A1	P12109	1028 aa		29.35	■■■□□ 2.29
SRRM2-223	ENST00000575701	MRPL12	P52815	198 aa	Known RBP	29.35	■■■□□ 2.29
SRRM2-223	ENST00000575701	PRPF38B	Q5VTL8	546 aa	Known RBP	29.35	■■■□□ 2.29
SRRM2-223	ENST00000575701	ANO1	Q5XXA6	986 aa		29.35	■■■□□ 2.29
SRRM2-223	ENST00000575701	SAMD3	Q8N6K7	520 aa		29.35	■■■□□ 2.29

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms