RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 KIF5BP33176 963 aa15.81■□□□□ 0.12
CIITA-210ENST00000575513 TRAF1Q13077 416 aa15.81■□□□□ 0.12
CIITA-210ENST00000575513 CDC37Q16543 378 aaPredicted RBP15.81■□□□□ 0.12
CIITA-210ENST00000575513 MUM1L1Q5H9M0 696 aa15.81■□□□□ 0.12
CIITA-210ENST00000575513 TRPV1Q8NER1 839 aa15.81■□□□□ 0.12
CIITA-210ENST00000575513 CLEC4DQ8WXI8 215 aa15.81■□□□□ 0.12
CIITA-210ENST00000575513 LZTS2Q9BRK4 669 aa15.81■□□□□ 0.12
CIITA-210ENST00000575513 RIOX1Q9H6W3 641 aa15.81■□□□□ 0.12
CIITA-210ENST00000575513 CNPY2Q9Y2B0 182 aa15.81■□□□□ 0.12
CIITA-210ENST00000575513 ABCB11O95342 1321 aa15.8■□□□□ 0.12
CIITA-210ENST00000575513 CCDC69A6NI79 296 aa15.8■□□□□ 0.12
CIITA-210ENST00000575513 ASB14A6NK59 587 aa15.8■□□□□ 0.12
CIITA-210ENST00000575513 FARP2O94887 1054 aaPredicted RBP15.8■□□□□ 0.12
CIITA-210ENST00000575513 GNAQP50148 359 aa15.8■□□□□ 0.12
CIITA-210ENST00000575513 ZNF654Q8IZM8 581 aa15.8■□□□□ 0.12
CIITA-210ENST00000575513 CPVLQ9H3G5 476 aa15.8■□□□□ 0.12
CIITA-210ENST00000575513 MKI67P46013 3256 aaKnown RBP15.79■□□□□ 0.12
CIITA-210ENST00000575513 ZNFX1Q9P2E3 1918 aaKnown RBP15.79■□□□□ 0.12
CIITA-210ENST00000575513 ZBTB5O15062 677 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 DHX16O60231 1041 aaKnown RBP15.79■□□□□ 0.12
CIITA-210ENST00000575513 SNAI1O95863 264 aaPredicted RBP15.79■□□□□ 0.12
CIITA-210ENST00000575513 ZNF865P0CJ78 1059 aaPredicted RBP15.79■□□□□ 0.12
CIITA-210ENST00000575513 CNGA1P29973 690 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 QRICH1Q2TAL8 776 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 ADCK5Q3MIX3 580 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 NSMFQ6X4W1 530 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 NFXL1Q6ZNB6 911 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 FBXO11Q86XK2 927 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 MCF2L2Q86YR7 1114 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 FBXL16Q8N461 479 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 SAMD3Q8N6K7 520 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 CTCFLQ8NI51 663 aaPredicted RBP15.79■□□□□ 0.12
CIITA-210ENST00000575513 FGD4Q96M96 766 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 AMNQ9BXJ7 453 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 USP26Q9BXU7 913 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 ABHD16BQ9H3Z7 469 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 VAT1LQ9HCJ6 419 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 ADD3Q9UEY8 706 aaKnown RBP15.79■□□□□ 0.12
CIITA-210ENST00000575513 MRPL11Q9Y3B7 192 aaKnown RBP15.79■□□□□ 0.12
CIITA-210ENST00000575513 SLC12A7Q9Y666 1083 aa15.79■□□□□ 0.12
CIITA-210ENST00000575513 SOWAHBA6NEL2 793 aa15.78■□□□□ 0.12
CIITA-210ENST00000575513 NFIBO00712 420 aa15.78■□□□□ 0.12
CIITA-210ENST00000575513 PSMA5P28066 241 aa15.78■□□□□ 0.12
CIITA-210ENST00000575513 CNTN2Q02246 1040 aa15.78■□□□□ 0.12
CIITA-210ENST00000575513 BAATQ14032 418 aaPredicted RBP15.78■□□□□ 0.12
CIITA-210ENST00000575513 COL9A3Q14050 684 aaPredicted RBP15.78■□□□□ 0.12
CIITA-210ENST00000575513 PRAMEF19Q5SWL8 479 aa15.78■□□□□ 0.12
CIITA-210ENST00000575513 SYNE3Q6ZMZ3 975 aa15.78■□□□□ 0.12
CIITA-210ENST00000575513 RNF207Q6ZRF8 634 aa15.78■□□□□ 0.12
CIITA-210ENST00000575513 NECAB2Q7Z6G3 386 aa15.78■□□□□ 0.12
CIITA-210ENST00000575513 MORC4Q8TE76 937 aa15.78■□□□□ 0.12
CIITA-210ENST00000575513 NUP133Q8WUM0 1156 aa15.78■□□□□ 0.12
CIITA-210ENST00000575513 SPZ1Q9BXG8 430 aa15.78■□□□□ 0.12
CIITA-210ENST00000575513 GPHNQ9NQX3 736 aaPredicted RBP15.78■□□□□ 0.12
CIITA-210ENST00000575513 MAP3K20Q9NYL2 800 aaKnown RBP15.78■□□□□ 0.12
CIITA-210ENST00000575513 SNX14Q9Y5W7 946 aa15.78■□□□□ 0.12
CIITA-210ENST00000575513 PNMA6FA0A0J9YX94 578 aa15.77■□□□□ 0.12
CIITA-210ENST00000575513 AKR1A1P14550 325 aa15.77■□□□□ 0.12
CIITA-210ENST00000575513 MNX1P50219 401 aaPredicted RBP15.77■□□□□ 0.12
CIITA-210ENST00000575513 RCAN1P53805 252 aa15.77■□□□□ 0.12
CIITA-210ENST00000575513 ACVR2BQ13705 512 aa15.77■□□□□ 0.12
CIITA-210ENST00000575513 ARMCX2Q7L311 632 aa15.77■□□□□ 0.12
CIITA-210ENST00000575513 CCDC144CPQ8IYA2 1237 aa15.77■□□□□ 0.12
CIITA-210ENST00000575513 FANCBQ8NB91 859 aa15.77■□□□□ 0.12
CIITA-210ENST00000575513 ARRDC4Q8NCT1 418 aa15.77■□□□□ 0.12
CIITA-210ENST00000575513 DNERQ8NFT8 737 aa15.77■□□□□ 0.12
CIITA-210ENST00000575513 HTATIP2Q9BUP3 242 aa15.77■□□□□ 0.12
CIITA-210ENST00000575513 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.77■□□□□ 0.12
CIITA-210ENST00000575513 PTPDC1A2A3K4 754 aa15.76■□□□□ 0.11
CIITA-210ENST00000575513 B4DLN1 442 aa15.76■□□□□ 0.11
CIITA-210ENST00000575513 CYTH3O43739 400 aa15.76■□□□□ 0.11
CIITA-210ENST00000575513 TAL1P17542 331 aaPredicted RBP15.76■□□□□ 0.11
CIITA-210ENST00000575513 MRPL12P52815 198 aaKnown RBP15.76■□□□□ 0.11
CIITA-210ENST00000575513 RPS6P62753 249 aaKnown RBP15.76■□□□□ 0.11
CIITA-210ENST00000575513 GHRHRQ02643 423 aa15.76■□□□□ 0.11
CIITA-210ENST00000575513 PPP2R5BQ15173 497 aa15.76■□□□□ 0.11
CIITA-210ENST00000575513 SLC35G1Q2M3R5 365 aa15.76■□□□□ 0.11
CIITA-210ENST00000575513 USH1GQ495M9 461 aa15.76■□□□□ 0.11
CIITA-210ENST00000575513 PAWRQ96IZ0 340 aaKnown RBP15.76■□□□□ 0.11
CIITA-210ENST00000575513 MPHOSPH6Q99547 160 aaKnown RBP15.76■□□□□ 0.11
CIITA-210ENST00000575513 LRRC2Q9BYS8 371 aa15.76■□□□□ 0.11
CIITA-210ENST00000575513 FAM184BQ9ULE4 1060 aa15.76■□□□□ 0.11
CIITA-210ENST00000575513 TNRC18O15417 2968 aaPredicted RBP15.76■□□□□ 0.11
CIITA-210ENST00000575513 DNM1LO00429 736 aa15.75■□□□□ 0.11
CIITA-210ENST00000575513 RARBP10826 455 aa15.75■□□□□ 0.11
CIITA-210ENST00000575513 COL6A1P12109 1028 aa15.75■□□□□ 0.11
CIITA-210ENST00000575513 APOA5Q6Q788 366 aa15.75■□□□□ 0.11
CIITA-210ENST00000575513 BLOC1S2Q6QNY1 142 aa15.75■□□□□ 0.11
CIITA-210ENST00000575513 JAKMIP1Q96N16 626 aaKnown RBP15.75■□□□□ 0.11
CIITA-210ENST00000575513 PIGSQ96S52 555 aa15.75■□□□□ 0.11
CIITA-210ENST00000575513 TM6SF1Q9BZW5 370 aa15.75■□□□□ 0.11
CIITA-210ENST00000575513 KATNBL1Q9H079 304 aa15.75■□□□□ 0.11
CIITA-210ENST00000575513 RBM28Q9NW13 759 aaKnown RBP15.75■□□□□ 0.11
CIITA-210ENST00000575513 PCDHA1Q9Y5I3 950 aa15.75■□□□□ 0.11
CIITA-210ENST00000575513 ASTN1O14525 1302 aa15.74■□□□□ 0.11
CIITA-210ENST00000575513 RRP36Q96EU6 259 aaKnown RBP15.74■□□□□ 0.11
CIITA-210ENST00000575513 MYL10Q9BUA6 226 aa15.74■□□□□ 0.11
CIITA-210ENST00000575513 AGXT2Q9BYV1 514 aa15.74■□□□□ 0.11
CIITA-210ENST00000575513 C11orf49Q9H6J7 331 aa15.74■□□□□ 0.11
CIITA-210ENST00000575513 PPP1R11O60927 126 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms