RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 CPVLQ9H3G5 476 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 ANKZF1Q9H8Y5 726 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 C6orf50Q9HD87 102 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 EPN1Q9Y6I3 576 aaPredicted RBP10.04□□□□□ -0.8
NCBP3-204ENST00000574911 TAF1LQ8IZX4 1826 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 CDK5RAP2Q96SN8 1893 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 CCDC151A5D8V7 595 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 CCNT1O60563 726 aaKnown RBP10.04□□□□□ -0.8
NCBP3-204ENST00000574911 NDUFA10O95299 355 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 SRGNP10124 158 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 GNA11P29992 359 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 ORC2Q13416 577 aaPredicted RBP10.04□□□□□ -0.8
NCBP3-204ENST00000574911 WHAMMP3Q1A5X7 153 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 TEX11Q8IYF3 940 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 TRIM9Q9C026 710 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 MAGEC2Q9UBF1 373 aaPredicted RBP10.04□□□□□ -0.8
NCBP3-204ENST00000574911 PUF60Q9UHX1 559 aaKnown RBP10.04□□□□□ -0.8
NCBP3-204ENST00000574911 RAB21Q9UL25 225 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 LY75O60449 1722 aa10.04□□□□□ -0.8
NCBP3-204ENST00000574911 POTEB2H3BUK9 544 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 ATP2B4P23634 1241 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 CCNE1P24864 410 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 DNM2P50570 870 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 RHBDL3P58872 404 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 LETM2Q2VYF4 491 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 COBLL1Q53SF7 1204 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 WDR59Q6PJI9 974 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 USP17L2Q6R6M4 530 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 NEK8Q86SG6 692 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 CNBD1Q8NA66 436 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 HNRNPLLQ8WVV9 542 aaKnown RBP10.03□□□□□ -0.8
NCBP3-204ENST00000574911 P2RX5Q93086 422 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 RRP36Q96EU6 259 aaKnown RBP10.03□□□□□ -0.8
NCBP3-204ENST00000574911 FAM163AQ96GL9 167 aaPredicted RBP10.03□□□□□ -0.8
NCBP3-204ENST00000574911 C8orf37Q96NL8 207 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 FUT8Q9BYC5 575 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 ZSWIM4Q9H7M6 989 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 LUC7L2Q9Y383 392 aaKnown RBP10.03□□□□□ -0.8
NCBP3-204ENST00000574911 THSD7AQ9UPZ6 1657 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 ESYT2A0FGR8 921 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 RASSF10A6NK89 507 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 AMPD2Q01433 879 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 ZNF662Q6ZS27 426 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 CERKQ8TCT0 537 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 CCDC47Q96A33 483 aaKnown RBP10.03□□□□□ -0.8
NCBP3-204ENST00000574911 NGLY1Q96IV0 654 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 MMTAG2Q9BU76 263 aaKnown RBP10.03□□□□□ -0.8
NCBP3-204ENST00000574911 TTYH3Q9C0H2 523 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 EXOC1Q9NV70 894 aa10.03□□□□□ -0.8
NCBP3-204ENST00000574911 BICDL2A1A5D9 508 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 GAKO14976 1311 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 PLCG2P16885 1265 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 PPP1R2P41236 205 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 PDE4DQ08499 809 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 MEA1Q16626 185 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 LONRF2Q1L5Z9 754 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 SOGA3Q5TF21 947 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 ANKRD40Q6AI12 368 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 PRR5LQ6MZQ0 368 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 CSGALNACT2Q8N6G5 542 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 CEP95Q96GE4 821 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 PIGSQ96S52 555 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 TUBGCP2Q9BSJ2 902 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 MYH8P13535 1937 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 B4DLN1 442 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 MAP2K7O14733 419 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 UFL1O94874 794 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 TECP42680 631 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 HERVK_113P62684 666 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 PIP4K2BP78356 416 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 STK4Q13043 487 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 CRY2Q49AN0 593 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 FNBP4Q8N3X1 1017 aaPredicted RBP10.02□□□□□ -0.81
NCBP3-204ENST00000574911 TBCKQ8TEA7 893 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 NUP58Q9BVL2 599 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 HAUS4Q9H6D7 363 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 RIOX1Q9H6W3 641 aa10.02□□□□□ -0.81
NCBP3-204ENST00000574911 SEC63Q9UGP8 760 aaKnown RBP10.02□□□□□ -0.81
NCBP3-204ENST00000574911 MYH1P12882 1939 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 USP17L5A8MUK1 530 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 PSMD14O00487 310 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 ASIC1P78348 528 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 SMC1AQ14683 1233 aaKnown RBP10.01□□□□□ -0.81
NCBP3-204ENST00000574911 FAM196AQ6ZSG2 479 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 FAM114A1Q8IWE2 563 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 RETREG2Q8NC44 543 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 RPGRQ92834 1020 aaKnown RBP10.01□□□□□ -0.81
NCBP3-204ENST00000574911 CNOT6LQ96LI5 555 aaKnown RBP10.01□□□□□ -0.81
NCBP3-204ENST00000574911 PNKPQ96T60 521 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 GGA1Q9UJY5 639 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 MYO6Q9UM54 1294 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 PLIN4Q96Q06 1357 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 hCG_1984214I3L0E3 225 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 TFRCP02786 760 aaKnown RBP10.01□□□□□ -0.81
NCBP3-204ENST00000574911 FCER1AP12319 257 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 OAS2P29728 719 aaKnown RBP10.01□□□□□ -0.81
NCBP3-204ENST00000574911 CYP2C19P33261 490 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 AMPD3Q01432 767 aa10.01□□□□□ -0.81
NCBP3-204ENST00000574911 TSR1Q2NL82 804 aaKnown RBP10.01□□□□□ -0.81
NCBP3-204ENST00000574911 BEND6Q5SZJ8 279 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms