RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 SGSM2O43147 1006 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 DUSP11O75319 330 aaKnown RBP12.38□□□□□ -0.43
LITAF-216ENST00000574848 ALAS1P13196 640 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 SLC16A2P36021 539 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 MAGEA10P43363 369 aaPredicted RBP12.38□□□□□ -0.43
LITAF-216ENST00000574848 SLC4A3P48751 1232 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 RTP1P59025 263 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 CNTN2Q02246 1040 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 ACVR2BQ13705 512 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 PWP2Q15269 919 aaKnown RBP12.38□□□□□ -0.43
LITAF-216ENST00000574848 MUM1L1Q5H9M0 696 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 CCDC174Q6PII3 467 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 SLC39A5Q6ZMH5 540 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 RNF180Q86T96 592 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 CCDC144CPQ8IYA2 1237 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 ENAHQ8N8S7 591 aaPredicted RBP12.38□□□□□ -0.43
LITAF-216ENST00000574848 PNMA1Q8ND90 353 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 KLHDC9Q8NEP7 349 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 MORC4Q8TE76 937 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 ZSCAN10Q96SZ4 725 aaPredicted RBP12.38□□□□□ -0.43
LITAF-216ENST00000574848 TSEN34Q9BSV6 310 aaKnown RBP12.38□□□□□ -0.43
LITAF-216ENST00000574848 UPF3AQ9H1J1 476 aaKnown RBP12.38□□□□□ -0.43
LITAF-216ENST00000574848 ZSWIM5Q9P217 1185 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 MTMR7Q9Y216 660 aa12.38□□□□□ -0.43
LITAF-216ENST00000574848 TNKSO95271 1327 aa12.37□□□□□ -0.43
LITAF-216ENST00000574848 LAMA3Q16787 3333 aa12.37□□□□□ -0.43
LITAF-216ENST00000574848 ASB14A6NK59 587 aa12.37□□□□□ -0.43
LITAF-216ENST00000574848 ADCY6O43306 1168 aa12.37□□□□□ -0.43
LITAF-216ENST00000574848 PGK1P00558 417 aa12.37□□□□□ -0.43
LITAF-216ENST00000574848 SYN1P17600 705 aa12.37□□□□□ -0.43
LITAF-216ENST00000574848 SNAP25P60880 206 aa12.37□□□□□ -0.43
LITAF-216ENST00000574848 ASPRV1Q53RT3 343 aa12.37□□□□□ -0.43
LITAF-216ENST00000574848 CCSAPQ6IQ19 270 aaPredicted RBP12.37□□□□□ -0.43
LITAF-216ENST00000574848 LENG1Q96BZ8 264 aaPredicted RBP12.37□□□□□ -0.43
LITAF-216ENST00000574848 CHMP4CQ96CF2 233 aa12.37□□□□□ -0.43
LITAF-216ENST00000574848 ZKSCAN3Q9BRR0 538 aa12.37□□□□□ -0.43
LITAF-216ENST00000574848 MAF1Q9H063 256 aa12.37□□□□□ -0.43
LITAF-216ENST00000574848 GPCPD1Q9NPB8 672 aa12.37□□□□□ -0.43
LITAF-216ENST00000574848 ZHX1Q9UKY1 873 aaPredicted RBP12.37□□□□□ -0.43
LITAF-216ENST00000574848 A0A1W2PQ45 241 aaPredicted RBP12.36□□□□□ -0.43
LITAF-216ENST00000574848 A0A1W2PQY0 241 aa12.36□□□□□ -0.43
LITAF-216ENST00000574848 MOXD2PA6NHM9 499 aa12.36□□□□□ -0.43
LITAF-216ENST00000574848 NFIBO00712 420 aa12.36□□□□□ -0.43
LITAF-216ENST00000574848 CYP21A2P08686 494 aa12.36□□□□□ -0.43
LITAF-216ENST00000574848 ADCYAP1R1P41586 468 aa12.36□□□□□ -0.43
LITAF-216ENST00000574848 ATN1P54259 1190 aaPredicted RBP12.36□□□□□ -0.43
LITAF-216ENST00000574848 GJA9P57773 515 aa12.36□□□□□ -0.43
LITAF-216ENST00000574848 SEC23AQ15436 765 aa12.36□□□□□ -0.43
LITAF-216ENST00000574848 CCDC144BQ3MJ40 725 aa12.36□□□□□ -0.43
LITAF-216ENST00000574848 CLEC4DQ8WXI8 215 aa12.36□□□□□ -0.43
LITAF-216ENST00000574848 KAT14Q9H8E8 782 aa12.36□□□□□ -0.43
LITAF-216ENST00000574848 PCDH10Q9P2E7 1040 aa12.36□□□□□ -0.43
LITAF-216ENST00000574848 CTAGE5O15320 804 aa12.35□□□□□ -0.43
LITAF-216ENST00000574848 ACLYP53396 1101 aa12.35□□□□□ -0.43
LITAF-216ENST00000574848 PTH1RQ03431 593 aa12.35□□□□□ -0.43
LITAF-216ENST00000574848 RABEP1Q15276 862 aa12.35□□□□□ -0.43
LITAF-216ENST00000574848 TRIM60Q495X7 471 aa12.35□□□□□ -0.43
LITAF-216ENST00000574848 SNX21Q969T3 373 aa12.35□□□□□ -0.43
LITAF-216ENST00000574848 ESYT1Q9BSJ8 1104 aa12.35□□□□□ -0.43
LITAF-216ENST00000574848 UBAC1Q9BSL1 405 aa12.35□□□□□ -0.43
LITAF-216ENST00000574848 PDLIM7Q9NR12 457 aa12.35□□□□□ -0.43
LITAF-216ENST00000574848 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
LITAF-216ENST00000574848 MYADML2A6NDP7 307 aa12.34□□□□□ -0.43
LITAF-216ENST00000574848 ALDH5A1P51649 535 aaPredicted RBP12.34□□□□□ -0.43
LITAF-216ENST00000574848 LRIT3Q3SXY7 679 aa12.34□□□□□ -0.43
LITAF-216ENST00000574848 NSMFQ6X4W1 530 aa12.34□□□□□ -0.43
LITAF-216ENST00000574848 SLC30A10Q6XR72 485 aa12.34□□□□□ -0.43
LITAF-216ENST00000574848 CYB5R4Q7L1T6 521 aa12.34□□□□□ -0.43
LITAF-216ENST00000574848 TDHQ8IZJ6 230 aa12.34□□□□□ -0.43
LITAF-216ENST00000574848 RGS22Q8NE09 1264 aa12.34□□□□□ -0.43
LITAF-216ENST00000574848 MAP4K1Q92918 833 aa12.34□□□□□ -0.43
LITAF-216ENST00000574848 VTA1Q9NP79 307 aa12.34□□□□□ -0.43
LITAF-216ENST00000574848 ADD3Q9UEY8 706 aaKnown RBP12.34□□□□□ -0.43
LITAF-216ENST00000574848 GNEQ9Y223 722 aaKnown RBP12.34□□□□□ -0.43
LITAF-216ENST00000574848 ATP11BQ9Y2G3 1177 aa12.34□□□□□ -0.43
LITAF-216ENST00000574848 MYH6P13533 1939 aa12.34□□□□□ -0.43
LITAF-216ENST00000574848 SZT2Q5T011 3432 aa12.34□□□□□ -0.43
LITAF-216ENST00000574848 GOLGA8HP0CJ92 632 aa12.33□□□□□ -0.44
LITAF-216ENST00000574848 EDNRBP24530 442 aa12.33□□□□□ -0.44
LITAF-216ENST00000574848 BAATQ14032 418 aaPredicted RBP12.33□□□□□ -0.44
LITAF-216ENST00000574848 CDC37Q16543 378 aaPredicted RBP12.33□□□□□ -0.44
LITAF-216ENST00000574848 IFIT1BQ5T764 474 aaKnown RBP12.33□□□□□ -0.44
LITAF-216ENST00000574848 TAPT1Q6NXT6 567 aa12.33□□□□□ -0.44
LITAF-216ENST00000574848 ANKRD33Q7Z3H0 272 aa12.33□□□□□ -0.44
LITAF-216ENST00000574848 PCSK9Q8NBP7 692 aaKnown RBP12.33□□□□□ -0.44
LITAF-216ENST00000574848 DNERQ8NFT8 737 aa12.33□□□□□ -0.44
LITAF-216ENST00000574848 NUP133Q8WUM0 1156 aa12.33□□□□□ -0.44
LITAF-216ENST00000574848 FERMT2Q96AC1 680 aa12.33□□□□□ -0.44
LITAF-216ENST00000574848 TOX2Q96NM4 488 aa12.33□□□□□ -0.44
LITAF-216ENST00000574848 USP26Q9BXU7 913 aa12.33□□□□□ -0.44
LITAF-216ENST00000574848 SPC25Q9HBM1 224 aa12.33□□□□□ -0.44
LITAF-216ENST00000574848 Q9Y3F1 56 aa12.33□□□□□ -0.44
LITAF-216ENST00000574848 ELP1O95163 1332 aa12.33□□□□□ -0.44
LITAF-216ENST00000574848 ABCB11O95342 1321 aa12.33□□□□□ -0.44
LITAF-216ENST00000574848 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.32□□□□□ -0.44
LITAF-216ENST00000574848 RBM47A0AV96 593 aaKnown RBP12.32□□□□□ -0.44
LITAF-216ENST00000574848 E7EWF7 191 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 SOX1O00570 391 aaPredicted RBP12.32□□□□□ -0.44
LITAF-216ENST00000574848 ST18O60284 1047 aa12.32□□□□□ -0.44
LITAF-216ENST00000574848 MYCNP04198 464 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms