RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 RANBP17Q9H2T7 1088 aaKnown RBP16.87■□□□□ 0.29
TVP23A-208ENST00000573857 RWDD1Q9H446 243 aaPredicted RBP16.87■□□□□ 0.29
TVP23A-208ENST00000573857 CYP39A1Q9NYL5 469 aa16.87■□□□□ 0.29
TVP23A-208ENST00000573857 MCM3APO60318 1980 aa16.87■□□□□ 0.29
TVP23A-208ENST00000573857 ASTN1O14525 1302 aa16.87■□□□□ 0.29
TVP23A-208ENST00000573857 CTAGE5O15320 804 aa16.86■□□□□ 0.29
TVP23A-208ENST00000573857 ICAM1P05362 532 aa16.86■□□□□ 0.29
TVP23A-208ENST00000573857 PCP11498 1178 aaKnown RBP16.86■□□□□ 0.29
TVP23A-208ENST00000573857 SLC16A2P36021 539 aa16.86■□□□□ 0.29
TVP23A-208ENST00000573857 EPHB4P54760 987 aa16.86■□□□□ 0.29
TVP23A-208ENST00000573857 NKX3-2P78367 333 aa16.86■□□□□ 0.29
TVP23A-208ENST00000573857 TNFAIP2Q03169 654 aa16.86■□□□□ 0.29
TVP23A-208ENST00000573857 B4GALNT3Q6L9W6 998 aa16.86■□□□□ 0.29
TVP23A-208ENST00000573857 BTNL9Q6UXG8 535 aa16.86■□□□□ 0.29
TVP23A-208ENST00000573857 GUCD1Q96NT3 240 aa16.86■□□□□ 0.29
TVP23A-208ENST00000573857 PRUNE2Q8WUY3 3088 aa16.86■□□□□ 0.29
TVP23A-208ENST00000573857 A0A0U1RQG5 324 aaPredicted RBP16.85■□□□□ 0.29
TVP23A-208ENST00000573857 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.85■□□□□ 0.29
TVP23A-208ENST00000573857 SDSP20132 328 aa16.85■□□□□ 0.29
TVP23A-208ENST00000573857 CDK7P50613 346 aa16.85■□□□□ 0.29
TVP23A-208ENST00000573857 NUCB1Q02818 461 aa16.85■□□□□ 0.29
TVP23A-208ENST00000573857 FPGSQ05932 587 aa16.85■□□□□ 0.29
TVP23A-208ENST00000573857 AKNAD1Q5T1N1 836 aa16.85■□□□□ 0.29
TVP23A-208ENST00000573857 ZNF697Q5TEC3 545 aa16.85■□□□□ 0.29
TVP23A-208ENST00000573857 SYDE2Q5VT97 1194 aa16.85■□□□□ 0.29
TVP23A-208ENST00000573857 CHD1LQ86WJ1 897 aa16.85■□□□□ 0.29
TVP23A-208ENST00000573857 TBC1D10CQ8IV04 446 aa16.85■□□□□ 0.29
TVP23A-208ENST00000573857 PLEKHM2Q8IWE5 1019 aa16.85■□□□□ 0.29
TVP23A-208ENST00000573857 FAM161BQ96MY7 647 aa16.85■□□□□ 0.29
TVP23A-208ENST00000573857 TBX21Q9UL17 535 aa16.85■□□□□ 0.29
TVP23A-208ENST00000573857 GNEQ9Y223 722 aaKnown RBP16.85■□□□□ 0.29
TVP23A-208ENST00000573857 DDX49Q9Y6V7 483 aaKnown RBP16.85■□□□□ 0.29
TVP23A-208ENST00000573857 MROH7Q68CQ1 1323 aa16.85■□□□□ 0.29
TVP23A-208ENST00000573857 FRMPD2Q68DX3 1309 aaPredicted RBP16.85■□□□□ 0.29
TVP23A-208ENST00000573857 ARVCFO00192 962 aa16.84■□□□□ 0.29
TVP23A-208ENST00000573857 IGHDP01880 384 aa16.84■□□□□ 0.29
TVP23A-208ENST00000573857 PDHBP11177 359 aa16.84■□□□□ 0.29
TVP23A-208ENST00000573857 MFAP1P55081 439 aaKnown RBP16.84■□□□□ 0.29
TVP23A-208ENST00000573857 SMAD3P84022 425 aaKnown RBP16.84■□□□□ 0.29
TVP23A-208ENST00000573857 NSMFQ6X4W1 530 aa16.84■□□□□ 0.29
TVP23A-208ENST00000573857 MFSD6Q6ZSS7 791 aa16.84■□□□□ 0.29
TVP23A-208ENST00000573857 NOL8Q76FK4 1167 aaKnown RBP16.84■□□□□ 0.29
TVP23A-208ENST00000573857 VTI1AQ96AJ9 217 aa16.84■□□□□ 0.29
TVP23A-208ENST00000573857 OSBPL3Q9H4L5 887 aa16.84■□□□□ 0.29
TVP23A-208ENST00000573857 GPCPD1Q9NPB8 672 aa16.84■□□□□ 0.29
TVP23A-208ENST00000573857 TIMP1P01033 207 aa16.83■□□□□ 0.28
TVP23A-208ENST00000573857 BEX3Q00994 111 aa16.83■□□□□ 0.28
TVP23A-208ENST00000573857 TLK2Q86UE8 772 aa16.83■□□□□ 0.28
TVP23A-208ENST00000573857 FBXO16Q8IX29 292 aaPredicted RBP16.83■□□□□ 0.28
TVP23A-208ENST00000573857 MORC4Q8TE76 937 aa16.83■□□□□ 0.28
TVP23A-208ENST00000573857 RNPC3Q96LT9 517 aaKnown RBP16.83■□□□□ 0.28
TVP23A-208ENST00000573857 TTC14Q96N46 770 aa16.83■□□□□ 0.28
TVP23A-208ENST00000573857 PURBQ96QR8 312 aaKnown RBP16.83■□□□□ 0.28
TVP23A-208ENST00000573857 RNF41Q9H4P4 317 aaPredicted RBP16.83■□□□□ 0.28
TVP23A-208ENST00000573857 VCANP13611 3396 aa16.83■□□□□ 0.28
TVP23A-208ENST00000573857 LRRC37A2A6NM11 1700 aa16.82■□□□□ 0.28
TVP23A-208ENST00000573857 NEDD4P46934 1319 aa16.82■□□□□ 0.28
TVP23A-208ENST00000573857 NFIBO00712 420 aa16.82■□□□□ 0.28
TVP23A-208ENST00000573857 SMPD1P17405 629 aa16.82■□□□□ 0.28
TVP23A-208ENST00000573857 BAATQ14032 418 aaPredicted RBP16.82■□□□□ 0.28
TVP23A-208ENST00000573857 FSCN1Q16658 493 aaKnown RBP16.82■□□□□ 0.28
TVP23A-208ENST00000573857 TAPT1Q6NXT6 567 aa16.82■□□□□ 0.28
TVP23A-208ENST00000573857 EEPD1Q7L9B9 569 aa16.82■□□□□ 0.28
TVP23A-208ENST00000573857 VTA1Q9NP79 307 aa16.82■□□□□ 0.28
TVP23A-208ENST00000573857 PDGFCQ9NRA1 345 aa16.82■□□□□ 0.28
TVP23A-208ENST00000573857 CABYRO75952 493 aa16.81■□□□□ 0.28
TVP23A-208ENST00000573857 SNHG28P0DPA3 235 aa16.81■□□□□ 0.28
TVP23A-208ENST00000573857 PTGS1P23219 599 aa16.81■□□□□ 0.28
TVP23A-208ENST00000573857 ZNF543Q08ER8 600 aa16.81■□□□□ 0.28
TVP23A-208ENST00000573857 IQSEC1Q6DN90 963 aa16.81■□□□□ 0.28
TVP23A-208ENST00000573857 MFSD5Q6N075 450 aa16.81■□□□□ 0.28
TVP23A-208ENST00000573857 CXCL17Q6UXB2 119 aa16.81■□□□□ 0.28
TVP23A-208ENST00000573857 FAM126BQ8IXS8 530 aa16.81■□□□□ 0.28
TVP23A-208ENST00000573857 EXOC6Q8TAG9 804 aa16.81■□□□□ 0.28
TVP23A-208ENST00000573857 CLEC4DQ8WXI8 215 aa16.81■□□□□ 0.28
TVP23A-208ENST00000573857 ESR2Q92731 530 aa16.81■□□□□ 0.28
TVP23A-208ENST00000573857 AP5M1Q9H0R1 490 aa16.81■□□□□ 0.28
TVP23A-208ENST00000573857 SEMA6BQ9H3T3 888 aa16.81■□□□□ 0.28
TVP23A-208ENST00000573857 DIAPH3Q9NSV4 1193 aa16.81■□□□□ 0.28
TVP23A-208ENST00000573857 CUL9Q8IWT3 2517 aa16.8■□□□□ 0.28
TVP23A-208ENST00000573857 DLL1O00548 723 aa16.8■□□□□ 0.28
TVP23A-208ENST00000573857 ZNF213O14771 459 aa16.8■□□□□ 0.28
TVP23A-208ENST00000573857 DYNC1LI2O43237 492 aaPredicted RBP16.8■□□□□ 0.28
TVP23A-208ENST00000573857 ALDH5A1P51649 535 aaPredicted RBP16.8■□□□□ 0.28
TVP23A-208ENST00000573857 CWC27Q6UX04 472 aaKnown RBP16.8■□□□□ 0.28
TVP23A-208ENST00000573857 SLC43A3Q8NBI5 491 aa16.8■□□□□ 0.28
TVP23A-208ENST00000573857 CDX2Q99626 313 aaPredicted RBP16.8■□□□□ 0.28
TVP23A-208ENST00000573857 ADD3Q9UEY8 706 aaKnown RBP16.8■□□□□ 0.28
TVP23A-208ENST00000573857 PNMA2Q9UL42 364 aa16.8■□□□□ 0.28
TVP23A-208ENST00000573857 Q9Y3F1 56 aa16.8■□□□□ 0.28
TVP23A-208ENST00000573857 LCTP09848 1927 aa16.8■□□□□ 0.28
TVP23A-208ENST00000573857 WDR19Q8NEZ3 1342 aa16.79■□□□□ 0.28
TVP23A-208ENST00000573857 LOC102724159A0A0B4J2E5 919 aa16.79■□□□□ 0.28
TVP23A-208ENST00000573857 PTPDC1A2A3K4 754 aa16.79■□□□□ 0.28
TVP23A-208ENST00000573857 TLR3O15455 904 aaKnown RBP16.79■□□□□ 0.28
TVP23A-208ENST00000573857 ZEB2O60315 1214 aa16.79■□□□□ 0.28
TVP23A-208ENST00000573857 CD4P01730 458 aa16.79■□□□□ 0.28
TVP23A-208ENST00000573857 NT5C2P49902 561 aa16.79■□□□□ 0.28
TVP23A-208ENST00000573857 PPIGQ13427 754 aaKnown RBP eCLIP16.79■□□□□ 0.28
TVP23A-208ENST00000573857 PWP2Q15269 919 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms