RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 KIF1BPQ96EK5 621 aa14.58□□□□□ -0.08
PRPF8-208ENST00000573716 KATNBL1Q9H079 304 aa14.58□□□□□ -0.08
PRPF8-208ENST00000573716 SLC38A10Q9HBR0 1119 aa14.58□□□□□ -0.08
PRPF8-208ENST00000573716 NYAP2Q9P242 653 aa14.58□□□□□ -0.08
PRPF8-208ENST00000573716 ARPP21Q9UBL0 812 aaPredicted RBP14.58□□□□□ -0.08
PRPF8-208ENST00000573716 FEM1BQ9UK73 627 aa14.58□□□□□ -0.08
PRPF8-208ENST00000573716 DDX49Q9Y6V7 483 aaKnown RBP14.58□□□□□ -0.08
PRPF8-208ENST00000573716 SCN5AQ14524 2016 aa14.58□□□□□ -0.08
PRPF8-208ENST00000573716 IKQ13123 557 aaPredicted RBP14.57□□□□□ -0.08
PRPF8-208ENST00000573716 TTLL4Q14679 1199 aa14.57□□□□□ -0.08
PRPF8-208ENST00000573716 EEPD1Q7L9B9 569 aa14.57□□□□□ -0.08
PRPF8-208ENST00000573716 LRRC47Q8N1G4 583 aaKnown RBP14.57□□□□□ -0.08
PRPF8-208ENST00000573716 ARNTL2Q8WYA1 636 aa14.57□□□□□ -0.08
PRPF8-208ENST00000573716 ACAD9Q9H845 621 aa14.57□□□□□ -0.08
PRPF8-208ENST00000573716 COG6Q9Y2V7 657 aa14.57□□□□□ -0.08
PRPF8-208ENST00000573716 MTCH2Q9Y6C9 303 aa14.57□□□□□ -0.08
PRPF8-208ENST00000573716 GRIN2DO15399 1336 aa14.57□□□□□ -0.08
PRPF8-208ENST00000573716 FAM86C2PA6NEL3 165 aa14.56□□□□□ -0.08
PRPF8-208ENST00000573716 ASB14A6NK59 587 aa14.56□□□□□ -0.08
PRPF8-208ENST00000573716 CYP2C9P11712 490 aa14.56□□□□□ -0.08
PRPF8-208ENST00000573716 SMPD1P17405 629 aa14.56□□□□□ -0.08
PRPF8-208ENST00000573716 PUS7LQ9H0K6 701 aaKnown RBP14.56□□□□□ -0.08
PRPF8-208ENST00000573716 PDGFCQ9NRA1 345 aa14.56□□□□□ -0.08
PRPF8-208ENST00000573716 RNF146Q9NTX7 359 aa14.56□□□□□ -0.08
PRPF8-208ENST00000573716 GNEQ9Y223 722 aaKnown RBP14.56□□□□□ -0.08
PRPF8-208ENST00000573716 ZBED9Q6R2W3 1325 aa14.56□□□□□ -0.08
PRPF8-208ENST00000573716 TRANK1O15050 2925 aa14.55□□□□□ -0.08
PRPF8-208ENST00000573716 SOWAHBA6NEL2 793 aa14.55□□□□□ -0.08
PRPF8-208ENST00000573716 EPOPA6NHQ4 379 aa14.55□□□□□ -0.08
PRPF8-208ENST00000573716 PRDM1O75626 825 aa14.55□□□□□ -0.08
PRPF8-208ENST00000573716 UBE3CQ15386 1083 aa14.55□□□□□ -0.08
PRPF8-208ENST00000573716 ZSCAN25Q6NSZ9 544 aa14.55□□□□□ -0.08
PRPF8-208ENST00000573716 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.55□□□□□ -0.08
PRPF8-208ENST00000573716 FBXO16Q8IX29 292 aaPredicted RBP14.55□□□□□ -0.08
PRPF8-208ENST00000573716 FAM133AQ8N9E0 248 aa14.55□□□□□ -0.08
PRPF8-208ENST00000573716 PANK1Q8TE04 598 aa14.55□□□□□ -0.08
PRPF8-208ENST00000573716 AGBL1Q96MI9 1066 aa14.55□□□□□ -0.08
PRPF8-208ENST00000573716 HAUS7Q99871 368 aa14.55□□□□□ -0.08
PRPF8-208ENST00000573716 A1CFQ9NQ94 594 aaKnown RBP14.55□□□□□ -0.08
PRPF8-208ENST00000573716 TRMT13Q9NUP7 481 aaKnown RBP14.55□□□□□ -0.08
PRPF8-208ENST00000573716 COG5Q9UP83 839 aa14.55□□□□□ -0.08
PRPF8-208ENST00000573716 TMEM232C9JQI7 657 aa14.54□□□□□ -0.08
PRPF8-208ENST00000573716 BMP3P12645 472 aa14.54□□□□□ -0.08
PRPF8-208ENST00000573716 ACTN1P12814 892 aa14.54□□□□□ -0.08
PRPF8-208ENST00000573716 ALAS1P13196 640 aa14.54□□□□□ -0.08
PRPF8-208ENST00000573716 ATP5JP18859 108 aa14.54□□□□□ -0.08
PRPF8-208ENST00000573716 OAZ1P54368 228 aa14.54□□□□□ -0.08
PRPF8-208ENST00000573716 NKX3-2P78367 333 aa14.54□□□□□ -0.08
PRPF8-208ENST00000573716 FAM47CQ5HY64 1035 aa14.54□□□□□ -0.08
PRPF8-208ENST00000573716 TMEM63BQ5T3F8 832 aa14.54□□□□□ -0.08
PRPF8-208ENST00000573716 SLFN13Q68D06 897 aa14.54□□□□□ -0.08
PRPF8-208ENST00000573716 ZNF444Q8N0Y2 327 aaPredicted RBP14.54□□□□□ -0.08
PRPF8-208ENST00000573716 HLA-CQ95604 372 aa14.54□□□□□ -0.08
PRPF8-208ENST00000573716 CEP95Q96GE4 821 aa14.54□□□□□ -0.08
PRPF8-208ENST00000573716 SEZ6LQ9BYH1 1024 aa14.54□□□□□ -0.08
PRPF8-208ENST00000573716 FTOQ9C0B1 505 aaKnown RBP eCLIP14.54□□□□□ -0.08
PRPF8-208ENST00000573716 ALDH8A1Q9H2A2 487 aaPredicted RBP14.54□□□□□ -0.08
PRPF8-208ENST00000573716 TNKSO95271 1327 aa14.53□□□□□ -0.08
PRPF8-208ENST00000573716 TLL1O43897 1013 aa14.53□□□□□ -0.08
PRPF8-208ENST00000573716 HMMRO75330 724 aa14.53□□□□□ -0.08
PRPF8-208ENST00000573716 PFKMP08237 780 aa14.53□□□□□ -0.08
PRPF8-208ENST00000573716 MYL3P08590 195 aa14.53□□□□□ -0.08
PRPF8-208ENST00000573716 SUPT20HL2P0C7V6 817 aa14.53□□□□□ -0.08
PRPF8-208ENST00000573716 SNAP25P60880 206 aa14.53□□□□□ -0.08
PRPF8-208ENST00000573716 IQSEC1Q6DN90 963 aa14.53□□□□□ -0.08
PRPF8-208ENST00000573716 KIAA1211Q6ZU35 1233 aa14.53□□□□□ -0.08
PRPF8-208ENST00000573716 PPP1R13LQ8WUF5 828 aa14.53□□□□□ -0.08
PRPF8-208ENST00000573716 VWCEQ96DN2 955 aa14.53□□□□□ -0.08
PRPF8-208ENST00000573716 TRERF1Q96PN7 1200 aa14.53□□□□□ -0.08
PRPF8-208ENST00000573716 COL4A4P53420 1690 aaPredicted RBP14.52□□□□□ -0.08
PRPF8-208ENST00000573716 GSG1L2A8MUP6 293 aa14.52□□□□□ -0.09
PRPF8-208ENST00000573716 TTLL1O95922 423 aa14.52□□□□□ -0.09
PRPF8-208ENST00000573716 APPP05067 770 aa14.52□□□□□ -0.09
PRPF8-208ENST00000573716 TDO2P48775 406 aa14.52□□□□□ -0.09
PRPF8-208ENST00000573716 STAT2P52630 851 aa14.52□□□□□ -0.09
PRPF8-208ENST00000573716 SBK1Q52WX2 424 aa14.52□□□□□ -0.09
PRPF8-208ENST00000573716 NSMFQ6X4W1 530 aa14.52□□□□□ -0.09
PRPF8-208ENST00000573716 KHSRPQ92945 711 aaKnown RBP eCLIP14.52□□□□□ -0.09
PRPF8-208ENST00000573716 STRBPQ96SI9 672 aaKnown RBP14.52□□□□□ -0.09
PRPF8-208ENST00000573716 SLC9A7Q96T83 725 aa14.52□□□□□ -0.09
PRPF8-208ENST00000573716 MTMR4Q9NYA4 1195 aa14.52□□□□□ -0.09
PRPF8-208ENST00000573716 XIRP2A4UGR9 3374 aa14.51□□□□□ -0.09
PRPF8-208ENST00000573716 IGKV6D-41A0A0C4DH26 115 aa14.51□□□□□ -0.09
PRPF8-208ENST00000573716 KIF28PB7ZC32 967 aa14.51□□□□□ -0.09
PRPF8-208ENST00000573716 RAB11FIP3O75154 756 aa14.51□□□□□ -0.09
PRPF8-208ENST00000573716 ARHGEF15O94989 841 aa14.51□□□□□ -0.09
PRPF8-208ENST00000573716 POU3F3P20264 500 aaPredicted RBP14.51□□□□□ -0.09
PRPF8-208ENST00000573716 CHMP4BP1P59074 171 aa14.51□□□□□ -0.09
PRPF8-208ENST00000573716 TAP1Q03518 808 aa14.51□□□□□ -0.09
PRPF8-208ENST00000573716 GRB10Q13322 594 aa14.51□□□□□ -0.09
PRPF8-208ENST00000573716 TAPT1Q6NXT6 567 aa14.51□□□□□ -0.09
PRPF8-208ENST00000573716 RETREG2Q8NC44 543 aa14.51□□□□□ -0.09
PRPF8-208ENST00000573716 GMCL1P1Q8NEA9 526 aa14.51□□□□□ -0.09
PRPF8-208ENST00000573716 CHURC1Q8WUH1 139 aa14.51□□□□□ -0.09
PRPF8-208ENST00000573716 ZNF287Q9HBT7 754 aa14.51□□□□□ -0.09
PRPF8-208ENST00000573716 GPHNQ9NQX3 736 aaPredicted RBP14.51□□□□□ -0.09
PRPF8-208ENST00000573716 POLR3EQ9NVU0 708 aa14.51□□□□□ -0.09
PRPF8-208ENST00000573716 MTMR7Q9Y216 660 aa14.51□□□□□ -0.09
PRPF8-208ENST00000573716 ARIH1Q9Y4X5 557 aaPredicted RBP14.51□□□□□ -0.09
PRPF8-208ENST00000573716 TSPY3P0CV98 308 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms