RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 TMEM260Q9NX78 707 aa14.64□□□□□ -0.07
PRPF8-207ENST00000573681 MYH6P13533 1939 aa14.63□□□□□ -0.07
PRPF8-207ENST00000573681 DICER1Q9UPY3 1922 aaKnown RBP14.63□□□□□ -0.07
PRPF8-207ENST00000573681 WNT7AO00755 349 aa14.63□□□□□ -0.07
PRPF8-207ENST00000573681 PPP1R12BO60237 982 aaPredicted RBP14.63□□□□□ -0.07
PRPF8-207ENST00000573681 USP2O75604 605 aaPredicted RBP14.63□□□□□ -0.07
PRPF8-207ENST00000573681 BACE1P56817 501 aa14.63□□□□□ -0.07
PRPF8-207ENST00000573681 MAP3K9P80192 1104 aa14.63□□□□□ -0.07
PRPF8-207ENST00000573681 TYRO3Q06418 890 aa14.63□□□□□ -0.07
PRPF8-207ENST00000573681 SPP2Q13103 211 aa14.63□□□□□ -0.07
PRPF8-207ENST00000573681 ZYXQ15942 572 aaKnown RBP14.63□□□□□ -0.07
PRPF8-207ENST00000573681 PRAMEF18Q5VWM3 479 aa14.63□□□□□ -0.07
PRPF8-207ENST00000573681 PPP4R3AQ6IN85 833 aa14.63□□□□□ -0.07
PRPF8-207ENST00000573681 KRBA2Q6ZNG9 492 aa14.63□□□□□ -0.07
PRPF8-207ENST00000573681 ZNF280CQ8ND82 737 aa14.63□□□□□ -0.07
PRPF8-207ENST00000573681 CNNM3Q8NE01 707 aa14.63□□□□□ -0.07
PRPF8-207ENST00000573681 KIFC2Q96AC6 838 aa14.63□□□□□ -0.07
PRPF8-207ENST00000573681 KIAA1468Q9P260 1216 aa14.63□□□□□ -0.07
PRPF8-207ENST00000573681 MRPL11Q9Y3B7 192 aaKnown RBP14.63□□□□□ -0.07
PRPF8-207ENST00000573681 VWA3AA6NCI4 1184 aa14.62□□□□□ -0.07
PRPF8-207ENST00000573681 IQCA1LA6NCM1 817 aa14.62□□□□□ -0.07
PRPF8-207ENST00000573681 PIK3CDO00329 1044 aa14.62□□□□□ -0.07
PRPF8-207ENST00000573681 CCNT1O60563 726 aaKnown RBP14.62□□□□□ -0.07
PRPF8-207ENST00000573681 GCFC2P16383 781 aaKnown RBP14.62□□□□□ -0.07
PRPF8-207ENST00000573681 EPHX2P34913 555 aa14.62□□□□□ -0.07
PRPF8-207ENST00000573681 GRIN1Q05586 938 aa14.62□□□□□ -0.07
PRPF8-207ENST00000573681 ZRSR1Q15695 479 aaKnown RBP14.62□□□□□ -0.07
PRPF8-207ENST00000573681 ZKSCAN4Q969J2 545 aaPredicted RBP14.62□□□□□ -0.07
PRPF8-207ENST00000573681 AK8Q96MA6 479 aa14.62□□□□□ -0.07
PRPF8-207ENST00000573681 SLF1Q9BQI6 1058 aa14.62□□□□□ -0.07
PRPF8-207ENST00000573681 EMILIN3Q9NT22 766 aa14.62□□□□□ -0.07
PRPF8-207ENST00000573681 ANO10Q9NW15 660 aa14.62□□□□□ -0.07
PRPF8-207ENST00000573681 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.62□□□□□ -0.07
PRPF8-207ENST00000573681 MRVI1Q9Y6F6 885 aa14.62□□□□□ -0.07
PRPF8-207ENST00000573681 ZHX2Q9Y6X8 837 aa14.62□□□□□ -0.07
PRPF8-207ENST00000573681 ABCB11O95342 1321 aa14.62□□□□□ -0.07
PRPF8-207ENST00000573681 MEIS2O14770 477 aa14.61□□□□□ -0.07
PRPF8-207ENST00000573681 POLR2DO15514 142 aaKnown RBP14.61□□□□□ -0.07
PRPF8-207ENST00000573681 NEMFO60524 1076 aa14.61□□□□□ -0.07
PRPF8-207ENST00000573681 OR52Z1P0C646 297 aa14.61□□□□□ -0.07
PRPF8-207ENST00000573681 NF2P35240 595 aa14.61□□□□□ -0.07
PRPF8-207ENST00000573681 TXLNAP40222 546 aa14.61□□□□□ -0.07
PRPF8-207ENST00000573681 SNAP25P60880 206 aa14.61□□□□□ -0.07
PRPF8-207ENST00000573681 IL17AQ16552 155 aa14.61□□□□□ -0.07
PRPF8-207ENST00000573681 UBE2SQ16763 222 aa14.61□□□□□ -0.07
PRPF8-207ENST00000573681 LONRF3Q496Y0 759 aa14.61□□□□□ -0.07
PRPF8-207ENST00000573681 SPECC1Q5M775 1068 aa14.61□□□□□ -0.07
PRPF8-207ENST00000573681 KRT26Q7Z3Y9 468 aa14.61□□□□□ -0.07
PRPF8-207ENST00000573681 CCDC84Q86UT8 332 aaPredicted RBP14.61□□□□□ -0.07
PRPF8-207ENST00000573681 PNMA8AQ86V59 439 aaPredicted RBP14.61□□□□□ -0.07
PRPF8-207ENST00000573681 SAMD3Q8N6K7 520 aa14.61□□□□□ -0.07
PRPF8-207ENST00000573681 IQUBQ8NA54 791 aa14.61□□□□□ -0.07
PRPF8-207ENST00000573681 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.61□□□□□ -0.075e-8■□□□□ 9.7
PRPF8-207ENST00000573681 RBM46Q8TBY0 533 aaKnown RBP14.61□□□□□ -0.07
PRPF8-207ENST00000573681 C12orf42Q96LP6 360 aa14.61□□□□□ -0.07
PRPF8-207ENST00000573681 MYH4Q9Y623 1939 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 CYP3A7-CYP3A51PA0A087WV96 503 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 USP17L15C9J2P7 530 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 USP17L13C9JLJ4 530 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 USP17L11C9JVI0 530 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 USP17L18D6R9N7 530 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 USP17L22D6RA61 530 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 USP17L17D6RBQ6 530 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 USP17L19D6RCP7 530 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 USP17L20D6RJB6 530 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 ZBED4O75132 1171 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 SLFN14P0C7P3 912 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 CYP3A7P24462 503 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 IREB2P48200 963 aaKnown RBP14.6□□□□□ -0.07
PRPF8-207ENST00000573681 USP17L24Q0WX57 530 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 MTMR2Q13614 643 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 PDIA5Q14554 519 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 STX1AQ16623 288 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 USH1GQ495M9 461 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 USP17L6PQ6QN14 398 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 MOXD1Q6UVY6 613 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 SYMPKQ92797 1274 aaKnown RBP14.6□□□□□ -0.07
PRPF8-207ENST00000573681 EPSTI1Q96J88 318 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 MTMR9Q96QG7 549 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 NAT10Q9H0A0 1025 aaKnown RBP14.6□□□□□ -0.07
PRPF8-207ENST00000573681 TMEM60Q9H2L4 133 aa14.6□□□□□ -0.07
PRPF8-207ENST00000573681 CTDP1Q9Y5B0 961 aaPredicted RBP14.6□□□□□ -0.07
PRPF8-207ENST00000573681 SBF1O95248 1867 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 BAZ2BQ9UIF8 2168 aaKnown RBP14.59□□□□□ -0.07
PRPF8-207ENST00000573681 SPDYE3A6NKU9 549 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 GCOM1H8Y6P7 765 aaPredicted RBP14.59□□□□□ -0.07
PRPF8-207ENST00000573681 ICAM1P05362 532 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 POLR2MP0CAP2 368 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 UBA7P41226 1012 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 MDM2Q00987 491 aaPredicted RBP14.59□□□□□ -0.07
PRPF8-207ENST00000573681 CCDC174Q6PII3 467 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 USP49Q70CQ1 688 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 LDHDQ86WU2 507 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 MCF2L2Q86YR7 1114 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 CEP57L1Q8IYX8 460 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 RNF214Q8ND24 703 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 FAM200AQ8TCP9 573 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 ANO3Q9BYT9 981 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 PANK2Q9BZ23 570 aa14.59□□□□□ -0.07
PRPF8-207ENST00000573681 CCSER1Q9C0I3 900 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms