RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 SLC12A9Q9BXP2 914 aa5.81□□□□□ -1.48
ERCC4-204ENST00000573018 LRRC3Q9BY71 257 aa5.81□□□□□ -1.48
ERCC4-204ENST00000573018 BCAS3Q9H6U6 928 aa5.81□□□□□ -1.48
ERCC4-204ENST00000573018 VTI1BQ9UEU0 232 aa5.81□□□□□ -1.48
ERCC4-204ENST00000573018 DBR1Q9UK59 544 aaKnown RBP5.81□□□□□ -1.48
ERCC4-204ENST00000573018 ITGB3P05106 788 aa5.8□□□□□ -1.48
ERCC4-204ENST00000573018 GSNP06396 782 aa5.8□□□□□ -1.48
ERCC4-204ENST00000573018 ASGR2P07307 311 aa5.8□□□□□ -1.48
ERCC4-204ENST00000573018 CCNFP41002 786 aa5.8□□□□□ -1.48
ERCC4-204ENST00000573018 CRKP46108 304 aa5.8□□□□□ -1.48
ERCC4-204ENST00000573018 CLCQ05315 142 aa5.8□□□□□ -1.48
ERCC4-204ENST00000573018 LNPKQ9C0E8 428 aa5.8□□□□□ -1.48
ERCC4-204ENST00000573018 RXFP1Q9HBX9 757 aa5.8□□□□□ -1.48
ERCC4-204ENST00000573018 SRRDQ9UH36 339 aa5.8□□□□□ -1.48
ERCC4-204ENST00000573018 H0Y8X5 98 aa5.79□□□□□ -1.48
ERCC4-204ENST00000573018 SORBS3O60504 671 aa5.79□□□□□ -1.48
ERCC4-204ENST00000573018 NCAM1P13591 858 aa5.79□□□□□ -1.48
ERCC4-204ENST00000573018 NME1P15531 152 aaKnown RBP5.79□□□□□ -1.48
ERCC4-204ENST00000573018 CWF19L1Q69YN2 538 aaKnown RBP5.79□□□□□ -1.48
ERCC4-204ENST00000573018 ALG3Q92685 438 aa5.79□□□□□ -1.48
ERCC4-204ENST00000573018 RNF38Q9H0F5 515 aa5.79□□□□□ -1.48
ERCC4-204ENST00000573018 EHMT1Q9H9B1 1298 aa5.79□□□□□ -1.48
ERCC4-204ENST00000573018 PDLIM7Q9NR12 457 aa5.79□□□□□ -1.48
ERCC4-204ENST00000573018 SUPT16HQ9Y5B9 1047 aaKnown RBP5.79□□□□□ -1.48
ERCC4-204ENST00000573018 EIF4A3P38919 411 aaKnown RBP5.78□□□□□ -1.48
ERCC4-204ENST00000573018 SEZ6Q53EL9 994 aa5.78□□□□□ -1.48
ERCC4-204ENST00000573018 LOXL4Q96JB6 756 aa5.78□□□□□ -1.48
ERCC4-204ENST00000573018 RBM15Q96T37 977 aaKnown RBP eCLIP5.78□□□□□ -1.48
ERCC4-204ENST00000573018 ROBO2Q9HCK4 1378 aa5.78□□□□□ -1.48
ERCC4-204ENST00000573018 C9IYK1 514 aa5.77□□□□□ -1.49
ERCC4-204ENST00000573018 SHOXO15266 292 aa5.77□□□□□ -1.49
ERCC4-204ENST00000573018 MCM4P33991 863 aa5.77□□□□□ -1.49
ERCC4-204ENST00000573018 CPZQ66K79 652 aa5.77□□□□□ -1.49
ERCC4-204ENST00000573018 USP48Q86UV5 1035 aa5.77□□□□□ -1.49
ERCC4-204ENST00000573018 CCDC144CPQ8IYA2 1237 aa5.77□□□□□ -1.49
ERCC4-204ENST00000573018 C7orf61Q8IZ16 206 aa5.77□□□□□ -1.49
ERCC4-204ENST00000573018 C8orf49Q96NF6 230 aa5.77□□□□□ -1.49
ERCC4-204ENST00000573018 NOX5Q96PH1 765 aa5.77□□□□□ -1.49
ERCC4-204ENST00000573018 SLC9A7Q96T83 725 aa5.77□□□□□ -1.49
ERCC4-204ENST00000573018 KRTAP3-1Q9BYR8 98 aa5.77□□□□□ -1.49
ERCC4-204ENST00000573018 MRS2Q9HD23 443 aa5.77□□□□□ -1.49
ERCC4-204ENST00000573018 PRR13Q9NZ81 148 aa5.77□□□□□ -1.49
ERCC4-204ENST00000573018 TNFRSF10CO14798 259 aa5.76□□□□□ -1.49
ERCC4-204ENST00000573018 FGF10O15520 208 aaPredicted RBP5.76□□□□□ -1.49
ERCC4-204ENST00000573018 GREM1O60565 184 aa5.76□□□□□ -1.49
ERCC4-204ENST00000573018 ZNF20P17024 532 aa5.76□□□□□ -1.49
ERCC4-204ENST00000573018 PMLP29590 882 aa5.76□□□□□ -1.49
ERCC4-204ENST00000573018 TDRD10Q5VZ19 366 aaKnown RBP5.76□□□□□ -1.49
ERCC4-204ENST00000573018 CYP2R1Q6VVX0 501 aa5.76□□□□□ -1.49
ERCC4-204ENST00000573018 ERMP1Q7Z2K6 904 aa5.76□□□□□ -1.49
ERCC4-204ENST00000573018 B3GNT8Q7Z7M8 397 aa5.76□□□□□ -1.49
ERCC4-204ENST00000573018 ZNF761Q86XN6 746 aaPredicted RBP5.76□□□□□ -1.49
ERCC4-204ENST00000573018 SMARCC2Q8TAQ2 1214 aa5.76□□□□□ -1.49
ERCC4-204ENST00000573018 ZNF296Q8WUU4 475 aaPredicted RBP5.76□□□□□ -1.49
ERCC4-204ENST00000573018 BRF1Q92994 677 aa5.76□□□□□ -1.49
ERCC4-204ENST00000573018 SCAND2PQ9GZW5 306 aaPredicted RBP5.76□□□□□ -1.49
ERCC4-204ENST00000573018 KCNQ5Q9NR82 932 aa5.76□□□□□ -1.49
ERCC4-204ENST00000573018 UBP1Q9NZI7 540 aa5.76□□□□□ -1.49
ERCC4-204ENST00000573018 OVOL3O00110 214 aa5.75□□□□□ -1.49
ERCC4-204ENST00000573018 SARSP49591 514 aaKnown RBP5.75□□□□□ -1.49
ERCC4-204ENST00000573018 TAGLNQ01995 201 aaKnown RBP5.75□□□□□ -1.49
ERCC4-204ENST00000573018 SPATA6Q9NWH7 488 aaPredicted RBP5.75□□□□□ -1.49
ERCC4-204ENST00000573018 SUCOQ9UBS9 1254 aaKnown RBP5.75□□□□□ -1.49
ERCC4-204ENST00000573018 SMAD4Q13485 552 aaKnown RBP5.74□□□□□ -1.49
ERCC4-204ENST00000573018 NOL9Q5SY16 702 aaKnown RBP5.74□□□□□ -1.49
ERCC4-204ENST00000573018 ZBTB8AQ96BR9 441 aa5.74□□□□□ -1.49
ERCC4-204ENST00000573018 FAM86C1Q9NVL1 165 aa5.74□□□□□ -1.49
ERCC4-204ENST00000573018 NTMQ9P121 344 aa5.74□□□□□ -1.49
ERCC4-204ENST00000573018 MEIS3P2A8K0S8 358 aa5.73□□□□□ -1.49
ERCC4-204ENST00000573018 GLI4P10075 376 aa5.73□□□□□ -1.49
ERCC4-204ENST00000573018 C6P13671 934 aa5.73□□□□□ -1.49
ERCC4-204ENST00000573018 IFNGR1P15260 489 aa5.73□□□□□ -1.49
ERCC4-204ENST00000573018 L1CAMP32004 1257 aa5.73□□□□□ -1.49
ERCC4-204ENST00000573018 CORO7P57737 925 aa5.73□□□□□ -1.49
ERCC4-204ENST00000573018 ZNF445P59923 1031 aa5.73□□□□□ -1.49
ERCC4-204ENST00000573018 APOBRQ0VD83 1088 aa5.73□□□□□ -1.49
ERCC4-204ENST00000573018 DCAF15Q66K64 600 aa5.73□□□□□ -1.49
ERCC4-204ENST00000573018 FBXO33Q7Z6M2 555 aa5.73□□□□□ -1.49
ERCC4-204ENST00000573018 PTCHD1Q96NR3 888 aa5.73□□□□□ -1.49
ERCC4-204ENST00000573018 FCRL3Q96P31 734 aaPredicted RBP5.73□□□□□ -1.49
ERCC4-204ENST00000573018 SORCS2Q96PQ0 1159 aa5.73□□□□□ -1.49
ERCC4-204ENST00000573018 SRRTQ9BXP5 876 aaKnown RBP5.73□□□□□ -1.49
ERCC4-204ENST00000573018 C1QTNF3-AMACRE9PGA6 284 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 TBC1D8O95759 1140 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 PLATP00750 562 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 CD3EP07766 207 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 ACRP10323 421 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 NOP2P46087 812 aaKnown RBP5.72□□□□□ -1.49
ERCC4-204ENST00000573018 ZNF165P49910 485 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 HMGA2P52926 109 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 LRRFIP1Q32MZ4 808 aaKnown RBP5.72□□□□□ -1.49
ERCC4-204ENST00000573018 TBC1D10BQ4KMP7 808 aaPredicted RBP5.72□□□□□ -1.49
ERCC4-204ENST00000573018 TTLL7Q6ZT98 887 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 REXO1Q8N1G1 1221 aaKnown RBP5.72□□□□□ -1.49
ERCC4-204ENST00000573018 FIBCD1Q8N539 461 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 CHST13Q8NET6 341 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 ADAMTS17Q8TE56 1095 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 DHRS1Q96LJ7 313 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 SAMD11Q96NU1 681 aa5.72□□□□□ -1.49
ERCC4-204ENST00000573018 FBLN5Q9UBX5 448 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms