RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 TRIM39Q9HCM9 518 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 PDLIM7Q9NR12 457 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 ARHGEF4Q9NR80 690 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 MRGBPQ9NV56 204 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 MRFAP1Q9Y605 127 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 SNCAIPQ9Y6H5 919 aa5.83□□□□□ -1.48
TOPBP1-210ENST00000572787 GPRASP1Q5JY77 1395 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 RRN3P2A6NIE6 340 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 RASA4BC9J798 803 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 UBAP1LF5GYI3 381 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 EYA2O00167 538 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 RASA4O43374 803 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 ATE1O95260 518 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 CYP11A1P05108 521 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 ATF7P17544 494 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 RPL17P18621 184 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 CASQ1P31415 396 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 KRT9P35527 623 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 BPIFB3P59826 476 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 TRIM29Q14134 588 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 DDB1Q16531 1140 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 CFAP100Q494V2 611 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 C4orf48Q5BLP8 95 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 DGKKQ5KSL6 1271 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 IFIT1BQ5T764 474 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 SH3PXD2AQ5TCZ1 1133 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 ZCCHC8Q6NZY4 707 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 B3GNT9Q6UX72 402 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 ARHGEF25Q86VW2 580 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 ANKLE2Q86XL3 938 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 L3MBTL2Q969R5 705 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 FAXDC2Q96IV6 333 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 RMDN3Q96TC7 470 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 ABCG4Q9H172 646 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 CHRDQ9H2X0 955 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 DZANK1Q9NVP4 752 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 PA2G4Q9UQ80 394 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 USP3Q9Y6I4 520 aa5.82□□□□□ -1.48
TOPBP1-210ENST00000572787 GOLGA6L22H0YM25 854 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 TGFBR3LH3BV60 316 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 HTATSF1O43719 755 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 EFCAB14O75071 495 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 JMJD7P0C870 316 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 XPAP23025 273 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 AKAP5P24588 427 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 SMARCA1P28370 1054 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 GTF2E1P29083 439 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 IGFALSP35858 605 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 VEGFBP49765 207 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 ERVK-21P61565 698 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 CACNB2Q08289 660 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 AP3B2Q13367 1082 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 SART3Q15020 963 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 PLA2G4EQ3MJ16 856 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 INTS6LQ5JSJ4 861 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 RRP12Q5JTH9 1297 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 HECTD3Q5T447 861 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 MFSD4BQ5TF39 518 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 ANKRD45Q5TZF3 282 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 PTCRAQ6ISU1 281 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 PLBD1Q6P4A8 553 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 PDZD4Q76G19 769 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 GPR155Q7Z3F1 870 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 DPP9Q86TI2 863 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 MSANTD4Q8NCY6 345 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 OR8H1Q8NGG4 311 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 SLC30A5Q8TAD4 765 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 ZDHHC1Q8WTX9 485 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 IPCEF1Q8WWN9 437 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 N4BP2L2Q92802 583 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 XAGE2Q96GT9 111 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 TAAR9Q96RI9 348 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 BARD1Q99728 777 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 AARSD1Q9BTE6 412 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 ELAC1Q9H777 363 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 ABCB6Q9NP58 842 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 PDRG1Q9NUG6 133 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 NSMCE4AQ9NXX6 385 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 NFKBIL1Q9UBC1 381 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 STAP2Q9UGK3 403 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 HPS5Q9UPZ3 1129 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 PCDHB14Q9Y5E9 798 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 IKBKGQ9Y6K9 419 aa5.81□□□□□ -1.48
TOPBP1-210ENST00000572787 A0A1W2PQU0 124 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 TSPY2A6NKD2 308 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 B4E171 279 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 B4E1Z4 1266 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 M0R2C6 588 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 AP1G1O43747 822 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 OFD1O75665 1012 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 TSPY3P0CV98 308 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 TSPY8P0CW00 308 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 EDN3P14138 238 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 MX2P20592 715 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 STAT1P42224 750 aa5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 SSR1P43307 286 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 PAPOLAP51003 745 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-210ENST00000572787 TSPY1Q01534 308 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms