RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 KIAA1683Q9H0B3 1180 aa23.35■■□□□ 1.33
CHRNE-202ENST00000572438 TRAF1Q13077 416 aa23.34■■□□□ 1.33
CHRNE-202ENST00000572438 DTHD1Q6ZMT9 781 aa23.34■■□□□ 1.33
CHRNE-202ENST00000572438 SCYL3Q8IZE3 742 aa23.34■■□□□ 1.33
CHRNE-202ENST00000572438 LPAR1Q92633 364 aa23.34■■□□□ 1.33
CHRNE-202ENST00000572438 ANO10Q9NW15 660 aa23.34■■□□□ 1.33
CHRNE-202ENST00000572438 NEMFO60524 1076 aa23.33■■□□□ 1.33
CHRNE-202ENST00000572438 USH1GQ495M9 461 aa23.33■■□□□ 1.33
CHRNE-202ENST00000572438 PDILTQ8N807 584 aa23.33■■□□□ 1.33
CHRNE-202ENST00000572438 WRNIP1Q96S55 665 aa23.33■■□□□ 1.33
CHRNE-202ENST00000572438 DNAJC25Q9H1X3 360 aa23.33■■□□□ 1.33
CHRNE-202ENST00000572438 SERTAD1Q9UHV2 236 aa23.33■■□□□ 1.33
CHRNE-202ENST00000572438 HOOK1Q9UJC3 728 aaKnown RBP23.33■■□□□ 1.33
CHRNE-202ENST00000572438 OR52Z1P0C646 297 aa23.33■■□□□ 1.32
CHRNE-202ENST00000572438 CCDC173Q0VFZ6 552 aa23.33■■□□□ 1.32
CHRNE-202ENST00000572438 GPR162Q16538 588 aa23.33■■□□□ 1.32
CHRNE-202ENST00000572438 SUPT20HL1Q3ZLR7 823 aa23.33■■□□□ 1.32
CHRNE-202ENST00000572438 KIFC2Q96AC6 838 aa23.33■■□□□ 1.32
CHRNE-202ENST00000572438 RANBP17Q9H2T7 1088 aaKnown RBP23.33■■□□□ 1.32
CHRNE-202ENST00000572438 USP17L15C9J2P7 530 aa23.32■■□□□ 1.32
CHRNE-202ENST00000572438 USP17L13C9JLJ4 530 aa23.32■■□□□ 1.32
CHRNE-202ENST00000572438 USP17L11C9JVI0 530 aa23.32■■□□□ 1.32
CHRNE-202ENST00000572438 USP17L18D6R9N7 530 aa23.32■■□□□ 1.32
CHRNE-202ENST00000572438 USP17L22D6RA61 530 aa23.32■■□□□ 1.32
CHRNE-202ENST00000572438 USP17L17D6RBQ6 530 aa23.32■■□□□ 1.32
CHRNE-202ENST00000572438 USP17L19D6RCP7 530 aa23.32■■□□□ 1.32
CHRNE-202ENST00000572438 USP17L20D6RJB6 530 aa23.32■■□□□ 1.32
CHRNE-202ENST00000572438 WDR46O15213 610 aaKnown RBP23.32■■□□□ 1.32
CHRNE-202ENST00000572438 ACTN4O43707 911 aaKnown RBP23.32■■□□□ 1.32
CHRNE-202ENST00000572438 USP17L24Q0WX57 530 aa23.32■■□□□ 1.32
CHRNE-202ENST00000572438 ZRSR1Q15695 479 aaKnown RBP23.32■■□□□ 1.32
CHRNE-202ENST00000572438 MCTP2Q6DN12 878 aa23.32■■□□□ 1.32
CHRNE-202ENST00000572438 KANK3Q6NY19 840 aa23.32■■□□□ 1.32
CHRNE-202ENST00000572438 USP17L6PQ6QN14 398 aa23.32■■□□□ 1.32
CHRNE-202ENST00000572438 CBX8Q9HC52 389 aa23.32■■□□□ 1.32
CHRNE-202ENST00000572438 TUBE1Q9UJT0 475 aa23.32■■□□□ 1.32
CHRNE-202ENST00000572438 A0A087X0B3 334 aa23.31■■□□□ 1.32
CHRNE-202ENST00000572438 ZNF165P49910 485 aa23.31■■□□□ 1.32
CHRNE-202ENST00000572438 AP3B2Q13367 1082 aa23.31■■□□□ 1.32
CHRNE-202ENST00000572438 WDR18Q9BV38 432 aa23.31■■□□□ 1.32
CHRNE-202ENST00000572438 SSC5DA1L4H1 1573 aa23.31■■□□□ 1.32
CHRNE-202ENST00000572438 MEIS2O14770 477 aa23.31■■□□□ 1.32
CHRNE-202ENST00000572438 EDIL3O43854 480 aa23.31■■□□□ 1.32
CHRNE-202ENST00000572438 MDM2Q00987 491 aaPredicted RBP23.31■■□□□ 1.32
CHRNE-202ENST00000572438 PNOCQ13519 176 aa23.31■■□□□ 1.32
CHRNE-202ENST00000572438 ZKSCAN4Q969J2 545 aaPredicted RBP23.31■■□□□ 1.32
CHRNE-202ENST00000572438 PPP1R9BQ96SB3 815 aa23.31■■□□□ 1.32
CHRNE-202ENST00000572438 PYM1Q9BRP8 204 aaKnown RBP23.31■■□□□ 1.32
CHRNE-202ENST00000572438 PICK1Q9NRD5 415 aa23.31■■□□□ 1.32
CHRNE-202ENST00000572438 USP25Q9UHP3 1055 aa23.31■■□□□ 1.32
CHRNE-202ENST00000572438 PPP4R3AQ6IN85 833 aa23.3■■□□□ 1.32
CHRNE-202ENST00000572438 DPY19L2Q6NUT2 758 aa23.3■■□□□ 1.32
CHRNE-202ENST00000572438 C11orf57Q6ZUT1 292 aaPredicted RBP23.3■■□□□ 1.32
CHRNE-202ENST00000572438 TEX2Q8IWB9 1127 aa23.3■■□□□ 1.32
CHRNE-202ENST00000572438 DHX58Q96C10 678 aa23.3■■□□□ 1.32
CHRNE-202ENST00000572438 KLRG1Q96E93 195 aa23.3■■□□□ 1.32
CHRNE-202ENST00000572438 CCDC34Q96HJ3 373 aa23.3■■□□□ 1.32
CHRNE-202ENST00000572438 AS3MTQ9HBK9 375 aa23.3■■□□□ 1.32
CHRNE-202ENST00000572438 FBXO28Q9NVF7 368 aa23.3■■□□□ 1.32
CHRNE-202ENST00000572438 DOCK1Q14185 1865 aa23.3■■□□□ 1.32
CHRNE-202ENST00000572438 SLFN14P0C7P3 912 aa23.29■■□□□ 1.32
CHRNE-202ENST00000572438 PTPRAP18433 802 aa23.29■■□□□ 1.32
CHRNE-202ENST00000572438 TXLNAP40222 546 aa23.29■■□□□ 1.32
CHRNE-202ENST00000572438 USP14P54578 494 aa23.29■■□□□ 1.32
CHRNE-202ENST00000572438 MTMR2Q13614 643 aa23.29■■□□□ 1.32
CHRNE-202ENST00000572438 DCPSQ96C86 337 aaKnown RBP23.29■■□□□ 1.32
CHRNE-202ENST00000572438 L3MBTL3Q96JM7 780 aaPredicted RBP23.29■■□□□ 1.32
CHRNE-202ENST00000572438 NAP1L4Q99733 375 aaKnown RBP23.29■■□□□ 1.32
CHRNE-202ENST00000572438 ANO3Q9BYT9 981 aa23.29■■□□□ 1.32
CHRNE-202ENST00000572438 A0A087WWV3 80 aa23.29■■□□□ 1.32
CHRNE-202ENST00000572438 FOXN1O15353 648 aa23.29■■□□□ 1.32
CHRNE-202ENST00000572438 TDP2O95551 362 aa23.29■■□□□ 1.32
CHRNE-202ENST00000572438 POSTNQ15063 836 aa23.29■■□□□ 1.32
CHRNE-202ENST00000572438 CCDC174Q6PII3 467 aa23.29■■□□□ 1.32
CHRNE-202ENST00000572438 LUZP1Q86V48 1076 aa23.29■■□□□ 1.32
CHRNE-202ENST00000572438 POTEDQ86YR6 584 aa23.29■■□□□ 1.32
CHRNE-202ENST00000572438 FZD1Q9UP38 647 aa23.29■■□□□ 1.32
CHRNE-202ENST00000572438 OPLAHO14841 1288 aa23.28■■□□□ 1.32
CHRNE-202ENST00000572438 GCFC2P16383 781 aaKnown RBP23.28■■□□□ 1.32
CHRNE-202ENST00000572438 TAL1P17542 331 aaPredicted RBP23.28■■□□□ 1.32
CHRNE-202ENST00000572438 NLRP12P59046 1061 aa23.28■■□□□ 1.32
CHRNE-202ENST00000572438 CEP57L1Q8IYX8 460 aa23.28■■□□□ 1.32
CHRNE-202ENST00000572438 IQUBQ8NA54 791 aa23.28■■□□□ 1.32
CHRNE-202ENST00000572438 AK8Q96MA6 479 aa23.28■■□□□ 1.32
CHRNE-202ENST00000572438 MTMR9Q96QG7 549 aa23.28■■□□□ 1.32
CHRNE-202ENST00000572438 EMILIN3Q9NT22 766 aa23.28■■□□□ 1.32
CHRNE-202ENST00000572438 BIN1O00499 593 aa23.27■■□□□ 1.32
CHRNE-202ENST00000572438 SLC37A4O43826 429 aa23.27■■□□□ 1.32
CHRNE-202ENST00000572438 FOSP01100 380 aaPredicted RBP23.27■■□□□ 1.32
CHRNE-202ENST00000572438 SPP2Q13103 211 aa23.27■■□□□ 1.32
CHRNE-202ENST00000572438 CALCRLQ16602 461 aa23.27■■□□□ 1.32
CHRNE-202ENST00000572438 NOL9Q5SY16 702 aaKnown RBP23.27■■□□□ 1.32
CHRNE-202ENST00000572438 PRPF38AQ8NAV1 312 aaKnown RBP23.27■■□□□ 1.32
CHRNE-202ENST00000572438 SLF1Q9BQI6 1058 aa23.27■■□□□ 1.32
CHRNE-202ENST00000572438 NAT10Q9H0A0 1025 aaKnown RBP23.27■■□□□ 1.32
CHRNE-202ENST00000572438 PCDHA5Q9Y5H7 936 aa23.27■■□□□ 1.32
CHRNE-202ENST00000572438 PIK3CDO00329 1044 aa23.26■■□□□ 1.31
CHRNE-202ENST00000572438 BACE1P56817 501 aa23.26■■□□□ 1.31
CHRNE-202ENST00000572438 E2F4Q16254 413 aa23.26■■□□□ 1.31
CHRNE-202ENST00000572438 SULF1Q8IWU6 871 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms