RNA–Protein interactions for RNA: ENST00000572158.5

TOM1L1-210, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TOM1L1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-210ENST00000572158 SEC63Q9UGP8 760 aaKnown RBP11.24□□□□□ -0.61
TOM1L1-210ENST00000572158 MTMR6Q9Y217 621 aa11.24□□□□□ -0.61
TOM1L1-210ENST00000572158 PCDHA1Q9Y5I3 950 aa11.24□□□□□ -0.61
TOM1L1-210ENST00000572158 ZBED4O75132 1171 aa11.23□□□□□ -0.61
TOM1L1-210ENST00000572158 HSPA6P17066 643 aa11.23□□□□□ -0.61
TOM1L1-210ENST00000572158 PABPC4Q13310 644 aaKnown RBP eCLIP11.23□□□□□ -0.61
TOM1L1-210ENST00000572158 OXER1Q8TDS5 423 aa11.23□□□□□ -0.61
TOM1L1-210ENST00000572158 CLEC4DQ8WXI8 215 aa11.23□□□□□ -0.61
TOM1L1-210ENST00000572158 WASF1Q92558 559 aa11.23□□□□□ -0.61
TOM1L1-210ENST00000572158 TBC1D5Q92609 795 aa11.23□□□□□ -0.61
TOM1L1-210ENST00000572158 C8orf76Q96K31 380 aa11.23□□□□□ -0.61
TOM1L1-210ENST00000572158 SH3GLB2Q9NR46 395 aa11.23□□□□□ -0.61
TOM1L1-210ENST00000572158 KIF28PB7ZC32 967 aa11.22□□□□□ -0.61
TOM1L1-210ENST00000572158 M0R2N6 131 aa11.22□□□□□ -0.61
TOM1L1-210ENST00000572158 STX6O43752 255 aa11.22□□□□□ -0.61
TOM1L1-210ENST00000572158 FDX1P10109 184 aa11.22□□□□□ -0.61
TOM1L1-210ENST00000572158 PDIA4P13667 645 aaKnown RBP11.22□□□□□ -0.61
TOM1L1-210ENST00000572158 OAZ1P54368 228 aa11.22□□□□□ -0.61
TOM1L1-210ENST00000572158 SREBF2Q12772 1141 aa11.22□□□□□ -0.61
TOM1L1-210ENST00000572158 NOM1Q5C9Z4 860 aaKnown RBP11.22□□□□□ -0.61
TOM1L1-210ENST00000572158 MUM1L1Q5H9M0 696 aa11.22□□□□□ -0.61
TOM1L1-210ENST00000572158 PAGR1Q9BTK6 254 aa11.22□□□□□ -0.61
TOM1L1-210ENST00000572158 ZMYND12Q9H0C1 365 aa11.22□□□□□ -0.61
TOM1L1-210ENST00000572158 ZCCHC17Q9NP64 241 aaKnown RBP11.22□□□□□ -0.61
TOM1L1-210ENST00000572158 CCPG1Q9ULG6 757 aa11.22□□□□□ -0.61
TOM1L1-210ENST00000572158 THSD7BQ9C0I4 1608 aa11.22□□□□□ -0.61
TOM1L1-210ENST00000572158 SMCO2A6NFE2 343 aa11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 hCG_1984214I3L0E3 225 aa11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 NFIBO00712 420 aa11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 MMP1P03956 469 aa11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 STAT3P40763 770 aa11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 NAPAP54920 295 aa11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 SNRNP48Q6IEG0 339 aaKnown RBP11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 ANKRD13CQ8N6S4 541 aa11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 ZNF713Q8N859 430 aaPredicted RBP11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 MB21D1Q8N884 522 aa11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 TNFRSF25Q93038 417 aa11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 PARK7Q99497 189 aaKnown RBP11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 MOV10L1Q9BXT6 1211 aaKnown RBP11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 TEX13BQ9BXU2 312 aa11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 SPATC1LQ9H0A9 340 aa11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 MORF4L1Q9UBU8 362 aa11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 PNMA3Q9UL41 463 aa11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 RABGAP1Q9Y3P9 1069 aa11.21□□□□□ -0.61
TOM1L1-210ENST00000572158 ESYT2A0FGR8 921 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 BTBD18B2RXH4 712 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 MEIS2O14770 477 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 BRD1O95696 1058 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 BCRP11274 1271 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 ALAS1P13196 640 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 PDCP20941 246 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 MAP2K2P36507 400 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 ERVK-9P63128 1117 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 ERVK-24P63145 666 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 NR5A1Q13285 461 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 CRHR2Q13324 411 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 PLS1Q14651 629 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 TAF1CQ15572 869 aaPredicted RBP11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 EARS2Q5JPH6 523 aaKnown RBP11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 PPP1R18Q6NYC8 613 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 USP17L6PQ6QN14 398 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 C17orf99Q6UX52 265 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 RIOX2Q8IUF8 465 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 RGS22Q8NE09 1264 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 SMCR8Q8TEV9 937 aaPredicted RBP11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 TRERF1Q96PN7 1200 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 RIC8AQ9NPQ8 531 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 HOMER2Q9NSB8 354 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 CPA4Q9UI42 421 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 ABCB11O95342 1321 aa11.2□□□□□ -0.62
TOM1L1-210ENST00000572158 VPS37CA5D8V6 355 aaPredicted RBP11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 FAM205CA6NFA0 338 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 TLR2O60603 784 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 CD44P16070 742 aaKnown RBP11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 GCLCP48506 637 aaPredicted RBP11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 CLK2P49760 499 aaKnown RBP11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 NLRP5P59047 1200 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 RESTQ13127 1097 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 UBE2SQ16763 222 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 FOXD4L5Q5VV16 416 aaPredicted RBP11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 FERMT3Q86UX7 667 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 DIS3L2Q8IYB7 885 aaKnown RBP11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 DNAJC5GQ8N7S2 189 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 DAGLBQ8NCG7 672 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 RASGRP4Q8TDF6 673 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 FOXD4L4Q8WXT5 416 aaPredicted RBP11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 CHAMP1Q96JM3 812 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 PORCNQ9H237 461 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 PSTPIP2Q9H939 334 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 RNF146Q9NTX7 359 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 TMEM260Q9NX78 707 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 PCDHA4Q9UN74 947 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 KIF3AQ9Y496 699 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 H3BQV1 296 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 CA12O43570 354 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 EDIL3O43854 480 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 ZSCAN22P10073 491 aaPredicted RBP11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 ERCC3P19447 782 aa11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 U2AF2P26368 475 aaKnown RBP eCLIP11.19□□□□□ -0.62
TOM1L1-210ENST00000572158 HOXA13P31271 388 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms