RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 PIK3R5Q8WYR1 880 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 TRIM47Q96LD4 638 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 TUBGCP2Q9BSJ2 902 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 POLD4Q9HCU8 107 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 ALS2Q96Q42 1657 aa18.71■□□□□ 0.59
LITAF-209ENST00000571688 TRPM3Q9HCF6 1732 aaPredicted RBP18.71■□□□□ 0.59
LITAF-209ENST00000571688 TMCO5BA8MYB1 307 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 PRPF3O43395 683 aaKnown RBP18.7■□□□□ 0.58
LITAF-209ENST00000571688 FIGNQ5HY92 759 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 CYB5RLQ6IPT4 315 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 NOC3LQ8WTT2 800 aaKnown RBP18.7■□□□□ 0.58
LITAF-209ENST00000571688 MIEF2Q96C03 454 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 CCDC42Q96M95 316 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 UBR2Q8IWV8 1755 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 TTI2Q6NXR4 508 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 LMOD2Q6P5Q4 547 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 IFT20Q8IY31 132 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 ARMT1Q9H993 441 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 RBM12Q9NTZ6 932 aaKnown RBP18.7■□□□□ 0.58
LITAF-209ENST00000571688 PCDHA13Q9Y5I0 950 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 BCORQ6W2J9 1755 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 RTL9Q8NET4 1388 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 SCP2P22307 547 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 NF2P35240 595 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 PAFAH1B1P43034 410 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 TDO2P48775 406 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 SEC24CP53992 1094 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 IFT88Q13099 833 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 KCNB1Q14721 858 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 CEP85LQ5SZL2 805 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 VGLL2Q8N8G2 317 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 TTLL11Q8NHH1 800 aa18.7■□□□□ 0.58
LITAF-209ENST00000571688 IFIH1Q9BYX4 1025 aaKnown RBP18.7■□□□□ 0.58
LITAF-209ENST00000571688 CCDC189A1A4V9 331 aa18.69■□□□□ 0.58
LITAF-209ENST00000571688 FAM153BP0C7A2 387 aa18.69■□□□□ 0.58
LITAF-209ENST00000571688 CXCR5P32302 372 aa18.69■□□□□ 0.58
LITAF-209ENST00000571688 PHKA1P46020 1223 aa18.69■□□□□ 0.58
LITAF-209ENST00000571688 CARSP49589 748 aaKnown RBP18.69■□□□□ 0.58
LITAF-209ENST00000571688 TBC1D8BQ0IIM8 1120 aa18.69■□□□□ 0.58
LITAF-209ENST00000571688 SEC23AQ15436 765 aa18.69■□□□□ 0.58
LITAF-209ENST00000571688 FAM153CQ494X1 144 aa18.69■□□□□ 0.58
LITAF-209ENST00000571688 N4BP2L2Q92802 583 aaPredicted RBP18.69■□□□□ 0.58
LITAF-209ENST00000571688 ATP6V1G3Q96LB4 118 aa18.69■□□□□ 0.58
LITAF-209ENST00000571688 ALS2CR12Q96Q35 445 aa18.69■□□□□ 0.58
LITAF-209ENST00000571688 ACTR5Q9H9F9 607 aaPredicted RBP18.69■□□□□ 0.58
LITAF-209ENST00000571688 FAM153AQ9UHL3 310 aa18.69■□□□□ 0.58
LITAF-209ENST00000571688 ODF2LQ9ULJ1 636 aa18.69■□□□□ 0.58
LITAF-209ENST00000571688 COL22A1Q8NFW1 1626 aaPredicted RBP18.69■□□□□ 0.58
LITAF-209ENST00000571688 hCG_1642624A0A1W2PR95 340 aa18.69■□□□□ 0.58
LITAF-209ENST00000571688 PLEKP08567 350 aaPredicted RBP18.69■□□□□ 0.58
LITAF-209ENST00000571688 HNRNPH3P31942 346 aaKnown RBP18.69■□□□□ 0.58
LITAF-209ENST00000571688 IQCA1Q86XH1 822 aa18.69■□□□□ 0.58
LITAF-209ENST00000571688 RBM33Q96EV2 1170 aaKnown RBP18.69■□□□□ 0.58
LITAF-209ENST00000571688 VEZTQ9HBM0 779 aa18.69■□□□□ 0.58
LITAF-209ENST00000571688 HMGB1P1B2RPK0 211 aaPredicted RBP18.68■□□□□ 0.58
LITAF-209ENST00000571688 PSMA7O14818 248 aa18.68■□□□□ 0.58
LITAF-209ENST00000571688 LCA5LO95447 670 aa18.68■□□□□ 0.58
LITAF-209ENST00000571688 PCCAP05165 728 aaPredicted RBP18.68■□□□□ 0.58
LITAF-209ENST00000571688 GLI1P08151 1106 aa18.68■□□□□ 0.58
LITAF-209ENST00000571688 PAK2Q13177 524 aa18.68■□□□□ 0.58
LITAF-209ENST00000571688 ITGB3BPQ13352 177 aaPredicted RBP18.68■□□□□ 0.58
LITAF-209ENST00000571688 PSMB7Q99436 277 aa18.68■□□□□ 0.58
LITAF-209ENST00000571688 DUSP9Q99956 384 aaKnown RBP18.68■□□□□ 0.58
LITAF-209ENST00000571688 NFU1Q9UMS0 254 aa18.68■□□□□ 0.58
LITAF-209ENST00000571688 PRKAB2O43741 272 aa18.68■□□□□ 0.58
LITAF-209ENST00000571688 KLRC4O43908 158 aa18.68■□□□□ 0.58
LITAF-209ENST00000571688 MRPL12P52815 198 aaKnown RBP18.68■□□□□ 0.58
LITAF-209ENST00000571688 FKBP15Q5T1M5 1219 aa18.68■□□□□ 0.58
LITAF-209ENST00000571688 PPP4R3AQ6IN85 833 aa18.68■□□□□ 0.58
LITAF-209ENST00000571688 LDHAL6AQ6ZMR3 332 aa18.68■□□□□ 0.58
LITAF-209ENST00000571688 CCDC155Q8N6L0 562 aa18.68■□□□□ 0.58
LITAF-209ENST00000571688 MAGEB6Q8N7X4 407 aa18.68■□□□□ 0.58
LITAF-209ENST00000571688 ERGIC2Q96RQ1 377 aa18.68■□□□□ 0.58
LITAF-209ENST00000571688 UBAC1Q9BSL1 405 aa18.68■□□□□ 0.58
LITAF-209ENST00000571688 UQCRFS1P1P0C7P4 283 aa18.67■□□□□ 0.58
LITAF-209ENST00000571688 TRAPPC10P48553 1259 aa18.67■□□□□ 0.58
LITAF-209ENST00000571688 FAM89AQ96GI7 184 aa18.67■□□□□ 0.58
LITAF-209ENST00000571688 ARHGAP20Q9P2F6 1191 aa18.67■□□□□ 0.58
LITAF-209ENST00000571688 PLAGL2Q9UPG8 496 aa18.67■□□□□ 0.58
LITAF-209ENST00000571688 V9GY48 417 aaPredicted RBP18.67■□□□□ 0.58
LITAF-209ENST00000571688 LONP1P36776 959 aaKnown RBP18.67■□□□□ 0.58
LITAF-209ENST00000571688 STAT6P42226 847 aa18.67■□□□□ 0.58
LITAF-209ENST00000571688 CDR1P51861 262 aa18.67■□□□□ 0.58
LITAF-209ENST00000571688 GIMAP8Q8ND71 665 aaPredicted RBP18.67■□□□□ 0.58
LITAF-209ENST00000571688 MAGEC3Q8TD91 643 aa18.67■□□□□ 0.58
LITAF-209ENST00000571688 CYFIP2Q96F07 1278 aa18.67■□□□□ 0.58
LITAF-209ENST00000571688 TLR10Q9BXR5 811 aa18.67■□□□□ 0.58
LITAF-209ENST00000571688 RNF41Q9H4P4 317 aaPredicted RBP18.67■□□□□ 0.58
LITAF-209ENST00000571688 TNKSO95271 1327 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 E7EVH7 732 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 NCK2O43639 380 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 RHOBTB3O94955 611 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 PLEKHA8P1O95397 391 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 GCFC2P16383 781 aaKnown RBP18.66■□□□□ 0.58
LITAF-209ENST00000571688 KIF11P52732 1056 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 SNCBQ16143 134 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 MIIPQ5JXC2 388 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 PARP9Q8IXQ6 854 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 FAM212AQ96EL1 285 aa18.66■□□□□ 0.58
LITAF-209ENST00000571688 HEXIM1O94992 359 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms