RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 M0R2N6 131 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 BAG4O95429 457 aaKnown RBP13.65□□□□□ -0.22
CDRT1-206ENST00000571263 BMP15O95972 392 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 SLC10A3P09131 477 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 GCLCP48506 637 aaPredicted RBP13.65□□□□□ -0.22
CDRT1-206ENST00000571263 SREBF2Q12772 1141 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 ORC2Q13416 577 aaPredicted RBP13.65□□□□□ -0.22
CDRT1-206ENST00000571263 DGKZQ13574 1117 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 MOGSQ13724 837 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 TREML2Q5T2D2 321 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 FOXD4L5Q5VV16 416 aaPredicted RBP13.65□□□□□ -0.22
CDRT1-206ENST00000571263 MYSM1Q5VVJ2 828 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 GPAT2Q6NUI2 795 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 TYW1BQ6NUM6 668 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 CCDC174Q6PII3 467 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 RASAL3Q86YV0 1011 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 FOXD4L4Q8WXT5 416 aaPredicted RBP13.65□□□□□ -0.22
CDRT1-206ENST00000571263 TEX13BQ9BXU2 312 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 ASCC2Q9H1I8 757 aaPredicted RBP13.65□□□□□ -0.22
CDRT1-206ENST00000571263 EHMT1Q9H9B1 1298 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 FBXO40Q9UH90 709 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 CEP131Q9UPN4 1083 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 SRCAPQ6ZRS2 3230 aa13.65□□□□□ -0.22
CDRT1-206ENST00000571263 ZNF536O15090 1300 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 DDX11L8A8MPP1 907 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 GCOM1H8Y6P7 765 aaPredicted RBP13.64□□□□□ -0.23
CDRT1-206ENST00000571263 SLC25A27O95847 323 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 POLR2MP0CAP2 368 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 STAT3P40763 770 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 HERVK_113P62684 666 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 GHRHRQ02643 423 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 NONOQ15233 471 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDRT1-206ENST00000571263 NPY5RQ15761 445 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 USH1GQ495M9 461 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
CDRT1-206ENST00000571263 CPXCR1Q8N123 301 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 CHST13Q8NET6 341 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 REPS2Q8NFH8 660 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 P2RX7Q99572 595 aaKnown RBP13.64□□□□□ -0.23
CDRT1-206ENST00000571263 CREBZFQ9NS37 354 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 PCDHA6Q9UN73 950 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 RABGAP1Q9Y3P9 1069 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 PCDHA8Q9Y5H6 950 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 PTPRFP10586 1907 aa13.64□□□□□ -0.23
CDRT1-206ENST00000571263 SPDYE3A6NKU9 549 aa13.63□□□□□ -0.23
CDRT1-206ENST00000571263 PDHXO00330 501 aa13.63□□□□□ -0.23
CDRT1-206ENST00000571263 CLK2P49760 499 aaKnown RBP13.63□□□□□ -0.23
CDRT1-206ENST00000571263 APLP1P51693 650 aa13.63□□□□□ -0.23
CDRT1-206ENST00000571263 CCNA1P78396 465 aa13.63□□□□□ -0.23
CDRT1-206ENST00000571263 NR5A1Q13285 461 aa13.63□□□□□ -0.23
CDRT1-206ENST00000571263 RIOX2Q8IUF8 465 aa13.63□□□□□ -0.23
CDRT1-206ENST00000571263 TNFRSF25Q93038 417 aa13.63□□□□□ -0.23
CDRT1-206ENST00000571263 SHISA4Q96DD7 197 aa13.63□□□□□ -0.23
CDRT1-206ENST00000571263 PARK7Q99497 189 aaKnown RBP13.63□□□□□ -0.23
CDRT1-206ENST00000571263 RAVER2Q9HCJ3 691 aaKnown RBP13.63□□□□□ -0.23
CDRT1-206ENST00000571263 POLR3EQ9NVU0 708 aa13.63□□□□□ -0.23
CDRT1-206ENST00000571263 RTEL1Q9NZ71 1219 aa13.63□□□□□ -0.23
CDRT1-206ENST00000571263 ZNF214Q9UL59 606 aaPredicted RBP13.63□□□□□ -0.23
CDRT1-206ENST00000571263 MORC2Q9Y6X9 1032 aaPredicted RBP13.63□□□□□ -0.23
CDRT1-206ENST00000571263 KIF28PB7ZC32 967 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 BTBD19C9JJ37 291 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 YEATS4O95619 227 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 ALAS1P13196 640 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 NCLP19338 710 aaKnown RBP13.62□□□□□ -0.23
CDRT1-206ENST00000571263 USP11P51784 963 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 SNAP25P60880 206 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 DNM1Q05193 864 aaKnown RBP13.62□□□□□ -0.23
CDRT1-206ENST00000571263 TMEM132BQ14DG7 1078 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 DEFB115Q30KQ5 88 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 SNRNP48Q6IEG0 339 aaKnown RBP13.62□□□□□ -0.23
CDRT1-206ENST00000571263 JMYQ8N9B5 988 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 SHCBP1Q8NEM2 672 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 OXER1Q8TDS5 423 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 SMCR8Q8TEV9 937 aaPredicted RBP13.62□□□□□ -0.23
CDRT1-206ENST00000571263 BRI3BPQ8WY22 251 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 AGBL1Q96MI9 1066 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 TRERF1Q96PN7 1200 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 RCOR1Q9UKL0 485 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 ELP1O95163 1332 aa13.62□□□□□ -0.23
CDRT1-206ENST00000571263 MEIS2O14770 477 aa13.61□□□□□ -0.23
CDRT1-206ENST00000571263 ALDH1A1P00352 501 aa13.61□□□□□ -0.23
CDRT1-206ENST00000571263 MCM4P33991 863 aa13.61□□□□□ -0.23
CDRT1-206ENST00000571263 TM4SF4P48230 202 aa13.61□□□□□ -0.23
CDRT1-206ENST00000571263 NASPP49321 788 aaPredicted RBP13.61□□□□□ -0.23
CDRT1-206ENST00000571263 HSD17B4P51659 736 aa13.61□□□□□ -0.23
CDRT1-206ENST00000571263 NOGQ13253 232 aa13.61□□□□□ -0.23
CDRT1-206ENST00000571263 ANO1Q5XXA6 986 aa13.61□□□□□ -0.23
CDRT1-206ENST00000571263 PIK3AP1Q6ZUJ8 805 aa13.61□□□□□ -0.23
CDRT1-206ENST00000571263 TMEM87AQ8NBN3 555 aa13.61□□□□□ -0.23
CDRT1-206ENST00000571263 KCNG4Q8TDN1 519 aa13.61□□□□□ -0.23
CDRT1-206ENST00000571263 SPATA32Q96LK8 384 aa13.61□□□□□ -0.23
CDRT1-206ENST00000571263 SPATC1LQ9H0A9 340 aa13.61□□□□□ -0.23
CDRT1-206ENST00000571263 MROH8Q9H579 483 aa13.61□□□□□ -0.23
CDRT1-206ENST00000571263 ACAD9Q9H845 621 aa13.61□□□□□ -0.23
CDRT1-206ENST00000571263 BIN2Q9UBW5 565 aaPredicted RBP13.61□□□□□ -0.23
CDRT1-206ENST00000571263 PARP14Q460N5 1801 aa13.6□□□□□ -0.23
CDRT1-206ENST00000571263 RASSF10A6NK89 507 aa13.6□□□□□ -0.23
CDRT1-206ENST00000571263 LAD1O00515 517 aa13.6□□□□□ -0.23
CDRT1-206ENST00000571263 CFBP00751 764 aa13.6□□□□□ -0.23
CDRT1-206ENST00000571263 GCFC2P16383 781 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms