RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 FEZ1Q99689 392 aa8.59□□□□□ -1.03
CHD3-213ENST00000571249 LARP6Q9BRS8 491 aaKnown RBP8.59□□□□□ -1.03
CHD3-213ENST00000571249 MROH8Q9H579 483 aa8.59□□□□□ -1.03
CHD3-213ENST00000571249 NSUN3Q9H649 340 aaKnown RBP8.59□□□□□ -1.03
CHD3-213ENST00000571249 CTNNA3Q9UI47 895 aa8.59□□□□□ -1.03
CHD3-213ENST00000571249 HERC5Q9UII4 1024 aaKnown RBP8.59□□□□□ -1.03
CHD3-213ENST00000571249 CD207Q9UJ71 328 aa8.59□□□□□ -1.03
CHD3-213ENST00000571249 R4GN57 208 aa8.59□□□□□ -1.03
CHD3-213ENST00000571249 MYO18BQ8IUG5 2567 aa8.59□□□□□ -1.03
CHD3-213ENST00000571249 ASTN1O14525 1302 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 NBEAQ8NFP9 2946 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 A0A1B0GUL7 405 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 GRM8O00222 908 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 GJB5O95377 273 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 GH2P01242 217 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 IQCF3P0C7M6 154 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 KCNJ6P48051 423 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 TCTN1Q2MV58 587 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 CCDC144BQ3MJ40 725 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 EPC2Q52LR7 807 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 BEND3Q5T5X7 828 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 SLF2Q8IX21 1173 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 CYP2W1Q8TAV3 490 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 KLHDC4Q8TBB5 520 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 FAM163AQ96GL9 167 aaPredicted RBP8.58□□□□□ -1.04
CHD3-213ENST00000571249 MMP19Q99542 508 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 ALDH8A1Q9H2A2 487 aaPredicted RBP8.58□□□□□ -1.04
CHD3-213ENST00000571249 IGFLR1Q9H665 355 aa8.58□□□□□ -1.04
CHD3-213ENST00000571249 SIP14410 1827 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 GPR75-ASB3A0A0A6YYF3 556 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 F6X3S4 739 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 ICAM3P32942 547 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 GPM6BQ13491 265 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 COG2Q14746 738 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 GPNMBQ14956 572 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 PTPN21Q16825 1174 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 ASTLQ6HA08 431 aaPredicted RBP8.57□□□□□ -1.04
CHD3-213ENST00000571249 LURAP1LQ8IV03 231 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 SUCLG2Q96I99 432 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 CRBNQ96SW2 442 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 SMOC2Q9H3U7 446 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 SPC25Q9HBM1 224 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 INCENPQ9NQS7 918 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 GNL3LQ9NVN8 582 aaKnown RBP8.57□□□□□ -1.04
CHD3-213ENST00000571249 C9orf78Q9NZ63 289 aaPredicted RBP8.57□□□□□ -1.04
CHD3-213ENST00000571249 PI4KBQ9UBF8 816 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 ABCF2Q9UG63 623 aa8.57□□□□□ -1.04
CHD3-213ENST00000571249 MROH7-TTC4A0A0A0MT08 1334 aa8.56□□□□□ -1.04
CHD3-213ENST00000571249 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.56□□□□□ -1.04
CHD3-213ENST00000571249 H3BNC9 293 aa8.56□□□□□ -1.04
CHD3-213ENST00000571249 PI15O43692 258 aa8.56□□□□□ -1.04
CHD3-213ENST00000571249 CSPG5O95196 566 aa8.56□□□□□ -1.04
CHD3-213ENST00000571249 RRP1P56182 461 aaKnown RBP8.56□□□□□ -1.04
CHD3-213ENST00000571249 DMWDQ09019 674 aa8.56□□□□□ -1.04
CHD3-213ENST00000571249 ACVR2BQ13705 512 aa8.56□□□□□ -1.04
CHD3-213ENST00000571249 ANGPT1Q15389 498 aa8.56□□□□□ -1.04
CHD3-213ENST00000571249 ZGPATQ8N5A5 531 aaKnown RBP8.56□□□□□ -1.04
CHD3-213ENST00000571249 LPIN2Q92539 896 aa8.56□□□□□ -1.04
CHD3-213ENST00000571249 ATG4CQ96DT6 458 aa8.56□□□□□ -1.04
CHD3-213ENST00000571249 KAZALD1Q96I82 304 aa8.56□□□□□ -1.04
CHD3-213ENST00000571249 GINM1Q9NU53 330 aa8.56□□□□□ -1.04
CHD3-213ENST00000571249 HOXC10Q9NYD6 342 aa8.56□□□□□ -1.04
CHD3-213ENST00000571249 DENND2AQ9ULE3 1009 aa8.56□□□□□ -1.04
CHD3-213ENST00000571249 DIS3Q9Y2L1 958 aaKnown RBP8.56□□□□□ -1.04
CHD3-213ENST00000571249 SIPA1L1O43166 1804 aa8.56□□□□□ -1.04
CHD3-213ENST00000571249 MYH13Q9UKX3 1938 aa8.55□□□□□ -1.04
CHD3-213ENST00000571249 BAIAP3O94812 1187 aa8.55□□□□□ -1.04
CHD3-213ENST00000571249 EYA4O95677 639 aa8.55□□□□□ -1.04
CHD3-213ENST00000571249 PSEN1P49768 467 aa8.55□□□□□ -1.04
CHD3-213ENST00000571249 CALD1Q05682 793 aaKnown RBP8.55□□□□□ -1.04
CHD3-213ENST00000571249 TMEM132BQ14DG7 1078 aa8.55□□□□□ -1.04
CHD3-213ENST00000571249 RAB3GAP1Q15042 981 aa8.55□□□□□ -1.04
CHD3-213ENST00000571249 KIAA1755Q5JYT7 1200 aa8.55□□□□□ -1.04
CHD3-213ENST00000571249 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.55□□□□□ -1.04
CHD3-213ENST00000571249 DDRGK1Q96HY6 314 aa8.55□□□□□ -1.04
CHD3-213ENST00000571249 MSLNLQ96KJ4 702 aa8.55□□□□□ -1.04
CHD3-213ENST00000571249 TRIM34Q9BYJ4 488 aa8.55□□□□□ -1.04
CHD3-213ENST00000571249 KIAA1683Q9H0B3 1180 aa8.55□□□□□ -1.04
CHD3-213ENST00000571249 CLEC1BQ9P126 229 aa8.55□□□□□ -1.04
CHD3-213ENST00000571249 PALD1Q9ULE6 856 aa8.55□□□□□ -1.04
CHD3-213ENST00000571249 CDK5RAP2Q96SN8 1893 aa8.55□□□□□ -1.04
CHD3-213ENST00000571249 WDFY3Q8IZQ1 3526 aa8.54□□□□□ -1.04
CHD3-213ENST00000571249 LAMA5O15230 3695 aa8.54□□□□□ -1.04
CHD3-213ENST00000571249 NCK2O43639 380 aa8.54□□□□□ -1.04
CHD3-213ENST00000571249 CABYRO75952 493 aa8.54□□□□□ -1.04
CHD3-213ENST00000571249 SP100P23497 879 aaPredicted RBP8.54□□□□□ -1.04
CHD3-213ENST00000571249 RFC2P35250 354 aa8.54□□□□□ -1.04
CHD3-213ENST00000571249 PHKA1P46020 1223 aa8.54□□□□□ -1.04
CHD3-213ENST00000571249 USP14P54578 494 aa8.54□□□□□ -1.04
CHD3-213ENST00000571249 MECOMQ03112 1051 aa8.54□□□□□ -1.04
CHD3-213ENST00000571249 ADAM15Q13444 863 aa8.54□□□□□ -1.04
CHD3-213ENST00000571249 TWISTNBQ3B726 338 aaPredicted RBP8.54□□□□□ -1.04
CHD3-213ENST00000571249 TMEM63BQ5T3F8 832 aa8.54□□□□□ -1.04
CHD3-213ENST00000571249 METTL16Q86W50 562 aaKnown RBP8.54□□□□□ -1.04
CHD3-213ENST00000571249 FOXP4Q8IVH2 680 aaPredicted RBP8.54□□□□□ -1.04
CHD3-213ENST00000571249 TEX11Q8IYF3 940 aa8.54□□□□□ -1.04
CHD3-213ENST00000571249 SH3RF3Q8TEJ3 882 aaPredicted RBP8.54□□□□□ -1.04
CHD3-213ENST00000571249 RUBCNQ92622 972 aa8.54□□□□□ -1.04
CHD3-213ENST00000571249 HAUS7Q99871 368 aa8.54□□□□□ -1.04
CHD3-213ENST00000571249 FAM117AQ9C073 453 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms