RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 SNCAIPQ9Y6H5 919 aa19.72■□□□□ 0.75
RPAIN-208ENST00000571043 WNT7AO00755 349 aa19.71■□□□□ 0.75
RPAIN-208ENST00000571043 NAPAP54920 295 aa19.71■□□□□ 0.75
RPAIN-208ENST00000571043 ARL6IP4Q66PJ3 421 aaKnown RBP19.71■□□□□ 0.75
RPAIN-208ENST00000571043 KANK3Q6NY19 840 aa19.71■□□□□ 0.75
RPAIN-208ENST00000571043 PIGSQ96S52 555 aa19.71■□□□□ 0.75
RPAIN-208ENST00000571043 GOLGA6L19H0YKK7 550 aa19.71■□□□□ 0.75
RPAIN-208ENST00000571043 ADAMTS3O15072 1205 aa19.71■□□□□ 0.75
RPAIN-208ENST00000571043 AP5Z1O43299 807 aa19.71■□□□□ 0.75
RPAIN-208ENST00000571043 PTGDRQ13258 359 aa19.71■□□□□ 0.75
RPAIN-208ENST00000571043 KRT25Q7Z3Z0 450 aa19.71■□□□□ 0.75
RPAIN-208ENST00000571043 ERCC4Q92889 916 aaPredicted RBP19.71■□□□□ 0.75
RPAIN-208ENST00000571043 WDR18Q9BV38 432 aa19.71■□□□□ 0.75
RPAIN-208ENST00000571043 UBA5Q9GZZ9 404 aa19.71■□□□□ 0.75
RPAIN-208ENST00000571043 CPVLQ9H3G5 476 aa19.71■□□□□ 0.75
RPAIN-208ENST00000571043 RRAGDQ9NQL2 400 aaPredicted RBP19.71■□□□□ 0.75
RPAIN-208ENST00000571043 FRMPD2Q68DX3 1309 aaPredicted RBP19.7■□□□□ 0.74
RPAIN-208ENST00000571043 A0A1W2PRG0 241 aa19.7■□□□□ 0.74
RPAIN-208ENST00000571043 SPECC1Q5M775 1068 aa19.7■□□□□ 0.74
RPAIN-208ENST00000571043 CCDC84Q86UT8 332 aaPredicted RBP19.7■□□□□ 0.74
RPAIN-208ENST00000571043 HOMER1Q86YM7 354 aa19.7■□□□□ 0.74
RPAIN-208ENST00000571043 CCDC34Q96HJ3 373 aa19.7■□□□□ 0.74
RPAIN-208ENST00000571043 CLMNQ96JQ2 1002 aa19.7■□□□□ 0.74
RPAIN-208ENST00000571043 VAT1LQ9HCJ6 419 aa19.7■□□□□ 0.74
RPAIN-208ENST00000571043 SYNPO2Q9UMS6 1093 aa19.7■□□□□ 0.74
RPAIN-208ENST00000571043 ZHX2Q9Y6X8 837 aa19.7■□□□□ 0.74
RPAIN-208ENST00000571043 MYH6P13533 1939 aa19.69■□□□□ 0.74
RPAIN-208ENST00000571043 SMCO2A6NFE2 343 aa19.69■□□□□ 0.74
RPAIN-208ENST00000571043 BECN2A8MW95 431 aa19.69■□□□□ 0.74
RPAIN-208ENST00000571043 POLR2DO15514 142 aaKnown RBP19.69■□□□□ 0.74
RPAIN-208ENST00000571043 PTMAP06454 111 aaKnown RBP19.69■□□□□ 0.74
RPAIN-208ENST00000571043 PLCB2Q00722 1185 aa19.69■□□□□ 0.74
RPAIN-208ENST00000571043 MDM2Q00987 491 aaPredicted RBP19.69■□□□□ 0.74
RPAIN-208ENST00000571043 ATP2B2Q01814 1243 aa19.69■□□□□ 0.74
RPAIN-208ENST00000571043 PPP1R18Q6NYC8 613 aa19.69■□□□□ 0.74
RPAIN-208ENST00000571043 ACER1Q8TDN7 264 aa19.69■□□□□ 0.74
RPAIN-208ENST00000571043 DCAF4Q8WV16 495 aa19.69■□□□□ 0.74
RPAIN-208ENST00000571043 AS3MTQ9HBK9 375 aa19.69■□□□□ 0.74
RPAIN-208ENST00000571043 ARHGEF10LQ9HCE6 1279 aa19.69■□□□□ 0.74
RPAIN-208ENST00000571043 TMX2Q9Y320 296 aa19.69■□□□□ 0.74
RPAIN-208ENST00000571043 MCM7P33993 719 aa19.68■□□□□ 0.74
RPAIN-208ENST00000571043 ECE1P42892 770 aa19.68■□□□□ 0.74
RPAIN-208ENST00000571043 PPATQ06203 517 aa19.68■□□□□ 0.74
RPAIN-208ENST00000571043 SARM1Q6SZW1 724 aa19.68■□□□□ 0.74
RPAIN-208ENST00000571043 ERO1BQ86YB8 467 aa19.68■□□□□ 0.74
RPAIN-208ENST00000571043 DHX40Q8IX18 779 aaKnown RBP19.68■□□□□ 0.74
RPAIN-208ENST00000571043 C4orf32Q8N8J7 132 aa19.68■□□□□ 0.74
RPAIN-208ENST00000571043 ZNF280CQ8ND82 737 aa19.68■□□□□ 0.74
RPAIN-208ENST00000571043 SLC10A4Q96EP9 437 aa19.68■□□□□ 0.74
RPAIN-208ENST00000571043 PYM1Q9BRP8 204 aaKnown RBP19.68■□□□□ 0.74
RPAIN-208ENST00000571043 ELP3Q9H9T3 547 aa19.68■□□□□ 0.74
RPAIN-208ENST00000571043 GPCPD1Q9NPB8 672 aa19.68■□□□□ 0.74
RPAIN-208ENST00000571043 AFG3L2Q9Y4W6 797 aa19.68■□□□□ 0.74
RPAIN-208ENST00000571043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.67■□□□□ 0.74
RPAIN-208ENST00000571043 PNMA6FA0A0J9YX94 578 aa19.67■□□□□ 0.74
RPAIN-208ENST00000571043 SPDYE5A6NIY4 337 aa19.67■□□□□ 0.74
RPAIN-208ENST00000571043 LAD1O00515 517 aa19.67■□□□□ 0.74
RPAIN-208ENST00000571043 ACTN4O43707 911 aaKnown RBP19.67■□□□□ 0.74
RPAIN-208ENST00000571043 DPCR1Q3MIW9 517 aa19.67■□□□□ 0.74
RPAIN-208ENST00000571043 RASGRP4Q8TDF6 673 aa19.67■□□□□ 0.74
RPAIN-208ENST00000571043 MTMR8Q96EF0 704 aa19.67■□□□□ 0.74
RPAIN-208ENST00000571043 SERTAD1Q9UHV2 236 aa19.67■□□□□ 0.74
RPAIN-208ENST00000571043 USP17L10C9JJH3 530 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 LONP1P36776 959 aaKnown RBP19.66■□□□□ 0.74
RPAIN-208ENST00000571043 SPP2Q13103 211 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 ORC2Q13416 577 aaPredicted RBP19.66■□□□□ 0.74
RPAIN-208ENST00000571043 PNOCQ13519 176 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 POSTNQ15063 836 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 NONOQ15233 471 aaKnown RBP eCLIP19.66■□□□□ 0.74
RPAIN-208ENST00000571043 CCDC96Q2M329 555 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 NT5DC1Q5TFE4 455 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 USP49Q70CQ1 688 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.66■□□□□ 0.74
RPAIN-208ENST00000571043 SAPCD2Q86UD0 394 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 ADGRF4Q8IZF3 695 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 SYMPKQ92797 1274 aaKnown RBP19.66■□□□□ 0.74
RPAIN-208ENST00000571043 SH2D4AQ9H788 454 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 JMJD4Q9H9V9 463 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 PTPRFP10586 1907 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 A0A087WWV3 80 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 VWA3AA6NCI4 1184 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 TMEM88BA6NKF7 163 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 F5H6K3 240 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 CLCN1P35523 988 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 HUNKP57058 714 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 KLRC3Q07444 240 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 PLA2G4DQ86XP0 818 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 GMCL1P1Q8NEA9 526 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 CNKSR2Q8WXI2 1034 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 KIAA1683Q9H0B3 1180 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 ZKSCAN5Q9Y2L8 839 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 PCDHA5Q9Y5H7 936 aa19.66■□□□□ 0.74
RPAIN-208ENST00000571043 SMTNL1A8MU46 457 aa19.65■□□□□ 0.74
RPAIN-208ENST00000571043 BIN1O00499 593 aa19.65■□□□□ 0.74
RPAIN-208ENST00000571043 TPM3P06753 285 aa19.65■□□□□ 0.74
RPAIN-208ENST00000571043 SLFN14P0C7P3 912 aa19.65■□□□□ 0.74
RPAIN-208ENST00000571043 MSNP26038 577 aaKnown RBP19.65■□□□□ 0.74
RPAIN-208ENST00000571043 ZNF75DP51815 510 aa19.65■□□□□ 0.74
RPAIN-208ENST00000571043 BACE1P56817 501 aa19.65■□□□□ 0.74
RPAIN-208ENST00000571043 INF2Q27J81 1249 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms