RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 UPF3AQ9H1J1 476 aaKnown RBP10.19□□□□□ -0.78
CTDNEP1-203ENST00000570385 GPCPD1Q9NPB8 672 aa10.19□□□□□ -0.78
CTDNEP1-203ENST00000570385 TBX21Q9UL17 535 aa10.19□□□□□ -0.78
CTDNEP1-203ENST00000570385 CCPG1Q9ULG6 757 aa10.19□□□□□ -0.78
CTDNEP1-203ENST00000570385 SYNPO2Q9UMS6 1093 aa10.19□□□□□ -0.78
CTDNEP1-203ENST00000570385 SALL3Q9BXA9 1300 aa10.18□□□□□ -0.78
CTDNEP1-203ENST00000570385 A0A0D9SFI3 127 aa10.18□□□□□ -0.78
CTDNEP1-203ENST00000570385 A0A0U1RQG5 324 aaPredicted RBP10.18□□□□□ -0.78
CTDNEP1-203ENST00000570385 GRXCR1A8MXD5 290 aa10.18□□□□□ -0.78
CTDNEP1-203ENST00000570385 FDX1P10109 184 aa10.18□□□□□ -0.78
CTDNEP1-203ENST00000570385 CSF2RAP15509 400 aa10.18□□□□□ -0.78
CTDNEP1-203ENST00000570385 SMPD1P17405 629 aa10.18□□□□□ -0.78
CTDNEP1-203ENST00000570385 CST5P28325 142 aaPredicted RBP10.18□□□□□ -0.78
CTDNEP1-203ENST00000570385 PDE1AP54750 535 aa10.18□□□□□ -0.78
CTDNEP1-203ENST00000570385 HAND2P61296 217 aa10.18□□□□□ -0.78
CTDNEP1-203ENST00000570385 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.18□□□□□ -0.78
CTDNEP1-203ENST00000570385 C16orf59Q7L2K0 433 aa10.18□□□□□ -0.78
CTDNEP1-203ENST00000570385 EVI5LQ96CN4 794 aa10.18□□□□□ -0.78
CTDNEP1-203ENST00000570385 CYP39A1Q9NYL5 469 aa10.18□□□□□ -0.78
CTDNEP1-203ENST00000570385 TTC28Q96AY4 2481 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 ASB14A6NK59 587 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 FGAP02671 866 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 FOSL2P15408 326 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 DNAJB2P25686 324 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 CYP2C18P33260 490 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 PBX2P40425 430 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 PSMC6P62333 389 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 NMIQ13287 307 aaPredicted RBP10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 GRIN2CQ14957 1233 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 TKFCQ3LXA3 575 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 B4GALNT3Q6L9W6 998 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 MFSD5Q6N075 450 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 TLK2Q86UE8 772 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 ZNF589Q86UQ0 364 aaPredicted RBP10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 FAM126BQ8IXS8 530 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 LNPKQ9C0E8 428 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 AP5M1Q9H0R1 490 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 ANAPC4Q9UJX5 808 aa10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 GNEQ9Y223 722 aaKnown RBP10.17□□□□□ -0.78
CTDNEP1-203ENST00000570385 UMODL1Q5DID0 1318 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 MROH7Q68CQ1 1323 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 TRIM6-TRIM34B2RNG4 842 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 NFIBO00712 420 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 ORC4O43929 436 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 PLA2G6O60733 806 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 PPIGQ13427 754 aaKnown RBP eCLIP10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 BAATQ14032 418 aaPredicted RBP10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 FSCN1Q16658 493 aaKnown RBP10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 MCMDC2Q4G0Z9 681 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 PPP4R3BQ5MIZ7 849 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 TMEM240Q5SV17 173 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 SYDE2Q5VT97 1194 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 TAPT1Q6NXT6 567 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 KIAA1211Q6ZU35 1233 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 ZNF365Q70YC5 407 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 PPP1R13LQ8WUF5 828 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 DCAF4Q8WV16 495 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 RILPL2Q969X0 211 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 TIFAQ96CG3 184 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 TMEM47Q9BQJ4 181 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 TRPV6Q9H1D0 765 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 HELLSQ9NRZ9 838 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 CDH23Q9H251 3354 aa10.16□□□□□ -0.78
CTDNEP1-203ENST00000570385 UNC80Q8N2C7 3258 aa10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 GRIN2DO15399 1336 aa10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 PTPDC1A2A3K4 754 aa10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 TLR3O15455 904 aaKnown RBP10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 ICAM1P05362 532 aa10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 FGRP09769 529 aa10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 HSPD1P10809 573 aaKnown RBP10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 TOP1P11387 765 aaKnown RBP10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 CALML3P27482 149 aa10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 CCL23P55773 120 aa10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 ITGA7Q13683 1181 aa10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 ALX1Q15699 326 aa10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 TMEM199Q8N511 208 aa10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 USP38Q8NB14 1042 aa10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 PPM1EQ8WY54 764 aa10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 ZKSCAN3Q9BRR0 538 aa10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 RANBP17Q9H2T7 1088 aaKnown RBP10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 CPVLQ9H3G5 476 aa10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 ZNF576Q9H609 170 aa10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 CXXC1Q9P0U4 656 aaPredicted RBP10.15□□□□□ -0.78
CTDNEP1-203ENST00000570385 B4GALT4O60513 344 aa10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 CD4P01730 458 aa10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 GOLGA8HP0CJ92 632 aa10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 PDHBP11177 359 aa10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 NOVP48745 357 aa10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 ALDH5A1P51649 535 aaPredicted RBP10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 NKX3-2P78367 333 aa10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 HDAC1Q13547 482 aaPredicted RBP10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 IQSEC1Q6DN90 963 aa10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 SLC30A10Q6XR72 485 aa10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 OTOP2Q7RTS6 562 aa10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 TBC1D10CQ8IV04 446 aa10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 PIAS4Q8N2W9 510 aaPredicted RBP10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 YTHDC1Q96MU7 727 aaKnown RBP10.14□□□□□ -0.79
CTDNEP1-203ENST00000570385 PBX4Q9BYU1 374 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms