RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	ITGA7	Q13683	1181 aa		13.11	□□□□□ -0.31
CMC2-223	ENST00000570195	TSHZ3	Q63HK5	1081 aa		13.11	□□□□□ -0.31
CMC2-223	ENST00000570195	TLK2	Q86UE8	772 aa		13.11	□□□□□ -0.31
CMC2-223	ENST00000570195	SLC43A3	Q8NBI5	491 aa		13.11	□□□□□ -0.31
CMC2-223	ENST00000570195	GMCL1P1	Q8NEA9	526 aa		13.11	□□□□□ -0.31
CMC2-223	ENST00000570195	ADAMTS19	Q8TE59	1207 aa		13.11	□□□□□ -0.31
CMC2-223	ENST00000570195	MTIF3	Q9H2K0	278 aa	Known RBP	13.11	□□□□□ -0.31
CMC2-223	ENST00000570195	SLC28A3	Q9HAS3	691 aa		13.11	□□□□□ -0.31
CMC2-223	ENST00000570195	ZNF287	Q9HBT7	754 aa		13.11	□□□□□ -0.31
CMC2-223	ENST00000570195	GNE	Q9Y223	722 aa	Known RBP	13.11	□□□□□ -0.31
CMC2-223	ENST00000570195	GRIN2D	O15399	1336 aa		13.11	□□□□□ -0.31
CMC2-223	ENST00000570195	DYNC1LI2	O43237	492 aa	Predicted RBP	13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	TSPY3	P0CV98	308 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	TSPY8	P0CW00	308 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	ALAS1	P13196	640 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	SMPD1	P17405	629 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	STAT2	P52630	851 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	RABGGTB	P53611	331 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	SNAP25	P60880	206 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	PSMC6	P62333	389 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	MRPS5	P82675	430 aa	Known RBP	13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	FSCN1	Q16658	493 aa	Known RBP	13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	TMEM63B	Q5T3F8	832 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	EEPD1	Q7L9B9	569 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	MICALL1	Q8N3F8	863 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	NEDD1	Q8NHV4	660 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	NOC4L	Q9BVI4	516 aa	Known RBP	13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	AP5M1	Q9H0R1	490 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	TRPV6	Q9H1D0	765 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	PDGFC	Q9NRA1	345 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	ZNF536	O15090	1300 aa		13.1	□□□□□ -0.31
CMC2-223	ENST00000570195	ASB14	A6NK59	587 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	B4GALT4	O60513	344 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	CABYR	O75952	493 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	FDX1	P10109	184 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	MYOG	P15173	224 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	GNAT2	P19087	354 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	MCC	P23508	829 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	TFAP4	Q01664	338 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	FAM160B2	Q86V87	743 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	FBXO16	Q8IX29	292 aa	Predicted RBP	13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	IFNL3	Q8IZI9	196 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	IL27	Q8NEV9	243 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	SCLY	Q96I15	445 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	TRERF1	Q96PN7	1200 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	UHRF1	Q96T88	793 aa	Predicted RBP	13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	WNT8A	Q9H1J5	351 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	CHMP4B	Q9H444	224 aa	Known RBP	13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	SYNPO2	Q9UMS6	1093 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	CHD9	Q3L8U1	2897 aa		13.09	□□□□□ -0.31
CMC2-223	ENST00000570195	ZBBX	A8MT70	800 aa		13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	PATL2	C9JE40	543 aa	Known RBP	13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	ZEB2	O60315	1214 aa		13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	ZFY	P08048	801 aa	Predicted RBP	13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	SLC1A4	P43007	532 aa		13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	MUM1L1	Q5H9M0	696 aa		13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	PPP2R2D	Q66LE6	453 aa		13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	TAPT1	Q6NXT6	567 aa		13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	KCTD1	Q719H9	257 aa		13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	RASGRP2	Q7LDG7	609 aa		13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	MIER1	Q8N108	512 aa		13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	CHURC1	Q8WUH1	139 aa		13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	STAG1	Q8WVM7	1258 aa		13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	PURB	Q96QR8	312 aa	Known RBP	13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	SEC62	Q99442	399 aa	Known RBP	13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	SLC4A7	Q9Y6M7	1214 aa		13.08	□□□□□ -0.32
CMC2-223	ENST00000570195	PLIN4	Q96Q06	1357 aa		13.07	□□□□□ -0.32
CMC2-223	ENST00000570195	PDE4B	Q07343	736 aa		13.07	□□□□□ -0.32
CMC2-223	ENST00000570195	TKFC	Q3LXA3	575 aa		13.07	□□□□□ -0.32
CMC2-223	ENST00000570195	IQSEC1	Q6DN90	963 aa		13.07	□□□□□ -0.32
CMC2-223	ENST00000570195	NSMF	Q6X4W1	530 aa		13.07	□□□□□ -0.32
CMC2-223	ENST00000570195	KIAA1211	Q6ZU35	1233 aa		13.07	□□□□□ -0.32
CMC2-223	ENST00000570195	RPUSD2	Q8IZ73	545 aa	Known RBP	13.07	□□□□□ -0.32
CMC2-223	ENST00000570195	GPATCH3	Q96I76	525 aa		13.07	□□□□□ -0.32
CMC2-223	ENST00000570195	GMCL1	Q96IK5	515 aa		13.07	□□□□□ -0.32
CMC2-223	ENST00000570195	NECAB3	Q96P71	396 aa	Predicted RBP	13.07	□□□□□ -0.32
CMC2-223	ENST00000570195	NACAP1	Q9BZK3	213 aa		13.07	□□□□□ -0.32
CMC2-223	ENST00000570195	STX8	Q9UNK0	236 aa		13.07	□□□□□ -0.32
CMC2-223	ENST00000570195	MTMR7	Q9Y216	660 aa		13.07	□□□□□ -0.32
CMC2-223	ENST00000570195	GBF1	Q92538	1859 aa		13.07	□□□□□ -0.32
CMC2-223	ENST00000570195	NCOR1	O75376	2440 aa		13.07	□□□□□ -0.32
CMC2-223	ENST00000570195	CYP2C9	P11712	490 aa		13.06	□□□□□ -0.32
CMC2-223	ENST00000570195	PPARA	Q07869	468 aa		13.06	□□□□□ -0.32
CMC2-223	ENST00000570195	C20orf194	Q5TEA3	1177 aa		13.06	□□□□□ -0.32
CMC2-223	ENST00000570195	VWCE	Q96DN2	955 aa		13.06	□□□□□ -0.32
CMC2-223	ENST00000570195	NAPB	Q9H115	298 aa		13.06	□□□□□ -0.32
CMC2-223	ENST00000570195	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.06	□□□□□ -0.32
CMC2-223	ENST00000570195	TRMT13	Q9NUP7	481 aa	Known RBP	13.06	□□□□□ -0.32
CMC2-223	ENST00000570195	CYP39A1	Q9NYL5	469 aa		13.06	□□□□□ -0.32
CMC2-223	ENST00000570195	PRR12	Q9ULL5	1215 aa		13.06	□□□□□ -0.32
CMC2-223	ENST00000570195	LRRC37A2	A6NM11	1700 aa		13.05	□□□□□ -0.32
CMC2-223	ENST00000570195	RFXAP	O00287	272 aa		13.05	□□□□□ -0.32
CMC2-223	ENST00000570195	SLC3A2	P08195	630 aa	Known RBP	13.05	□□□□□ -0.32
CMC2-223	ENST00000570195	ATP2A2	P16615	1042 aa	Known RBP	13.05	□□□□□ -0.32
CMC2-223	ENST00000570195	TFF2	Q03403	129 aa		13.05	□□□□□ -0.32
CMC2-223	ENST00000570195	TTLL4	Q14679	1199 aa		13.05	□□□□□ -0.32
CMC2-223	ENST00000570195	SKIV2L	Q15477	1246 aa	Known RBP	13.05	□□□□□ -0.32
CMC2-223	ENST00000570195	RCSD1	Q6JBY9	416 aa		13.05	□□□□□ -0.32
CMC2-223	ENST00000570195	DEFB128	Q7Z7B8	93 aa		13.05	□□□□□ -0.32
CMC2-223	ENST00000570195	SEZ6L	Q9BYH1	1024 aa		13.05	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms