RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 NSMFQ6X4W1 530 aa26.48■■□□□ 1.83
RBFOX1-219ENST00000569895 NOL8Q76FK4 1167 aaKnown RBP26.48■■□□□ 1.83
RBFOX1-219ENST00000569895 TOX2Q96NM4 488 aa26.48■■□□□ 1.83
RBFOX1-219ENST00000569895 PQBP1O60828 265 aaKnown RBP26.47■■□□□ 1.83
RBFOX1-219ENST00000569895 TNFAIP2Q03169 654 aa26.47■■□□□ 1.83
RBFOX1-219ENST00000569895 GNASQ5JWF2 1037 aa26.47■■□□□ 1.83
RBFOX1-219ENST00000569895 CCSAPQ6IQ19 270 aaPredicted RBP26.47■■□□□ 1.83
RBFOX1-219ENST00000569895 BADQ92934 168 aa26.47■■□□□ 1.83
RBFOX1-219ENST00000569895 VTI1AQ96AJ9 217 aa26.47■■□□□ 1.83
RBFOX1-219ENST00000569895 UPF3AQ9H1J1 476 aaKnown RBP26.47■■□□□ 1.83
RBFOX1-219ENST00000569895 DNAH12Q6ZR08 3092 aa26.47■■□□□ 1.83
RBFOX1-219ENST00000569895 ELP1O95163 1332 aa26.46■■□□□ 1.83
RBFOX1-219ENST00000569895 TRIM43BA6NCK2 446 aa26.46■■□□□ 1.83
RBFOX1-219ENST00000569895 ZNF543Q08ER8 600 aa26.46■■□□□ 1.83
RBFOX1-219ENST00000569895 GPATCH4Q5T3I0 446 aaKnown RBP26.46■■□□□ 1.83
RBFOX1-219ENST00000569895 ANKRD33Q7Z3H0 272 aa26.46■■□□□ 1.83
RBFOX1-219ENST00000569895 DEFB123Q8N688 67 aa26.46■■□□□ 1.83
RBFOX1-219ENST00000569895 TRIM43Q96BQ3 446 aaPredicted RBP26.46■■□□□ 1.83
RBFOX1-219ENST00000569895 KATNBL1Q9H079 304 aa26.46■■□□□ 1.83
RBFOX1-219ENST00000569895 ADD3Q9UEY8 706 aaKnown RBP26.46■■□□□ 1.83
RBFOX1-219ENST00000569895 MROH7Q68CQ1 1323 aa26.45■■□□□ 1.83
RBFOX1-219ENST00000569895 SH3RF1Q7Z6J0 888 aa26.45■■□□□ 1.82
RBFOX1-219ENST00000569895 TMEM39AQ9NV64 488 aa26.45■■□□□ 1.82
RBFOX1-219ENST00000569895 NEDD4P46934 1319 aa26.44■■□□□ 1.82
RBFOX1-219ENST00000569895 KDM4AO75164 1064 aa26.44■■□□□ 1.82
RBFOX1-219ENST00000569895 ASGR1P07306 291 aa26.44■■□□□ 1.82
RBFOX1-219ENST00000569895 SNHG28P0DPA3 235 aa26.44■■□□□ 1.82
RBFOX1-219ENST00000569895 RAG1P15918 1043 aa26.44■■□□□ 1.82
RBFOX1-219ENST00000569895 IQSEC1Q6DN90 963 aa26.44■■□□□ 1.82
RBFOX1-219ENST00000569895 ZKSCAN3Q9BRR0 538 aa26.44■■□□□ 1.82
RBFOX1-219ENST00000569895 KAT14Q9H8E8 782 aa26.44■■□□□ 1.82
RBFOX1-219ENST00000569895 LOC102724159A0A0B4J2E5 919 aa26.43■■□□□ 1.82
RBFOX1-219ENST00000569895 MYADML2A6NDP7 307 aa26.43■■□□□ 1.82
RBFOX1-219ENST00000569895 KIAA0355O15063 1070 aa26.43■■□□□ 1.82
RBFOX1-219ENST00000569895 NKX3-2P78367 333 aa26.43■■□□□ 1.82
RBFOX1-219ENST00000569895 BAATQ14032 418 aaPredicted RBP26.43■■□□□ 1.82
RBFOX1-219ENST00000569895 PWP2Q15269 919 aaKnown RBP26.43■■□□□ 1.82
RBFOX1-219ENST00000569895 KRT23Q9C075 422 aa26.43■■□□□ 1.82
RBFOX1-219ENST00000569895 AP5M1Q9H0R1 490 aa26.43■■□□□ 1.82
RBFOX1-219ENST00000569895 CNNM2Q9H8M5 875 aa26.43■■□□□ 1.82
RBFOX1-219ENST00000569895 SZT2Q5T011 3432 aa26.43■■□□□ 1.82
RBFOX1-219ENST00000569895 PTPDC1A2A3K4 754 aa26.42■■□□□ 1.82
RBFOX1-219ENST00000569895 ADCY6O43306 1168 aa26.42■■□□□ 1.82
RBFOX1-219ENST00000569895 ZEB2O60315 1214 aa26.42■■□□□ 1.82
RBFOX1-219ENST00000569895 MPHOSPH6Q99547 160 aaKnown RBP26.42■■□□□ 1.82
RBFOX1-219ENST00000569895 VTA1Q9NP79 307 aa26.42■■□□□ 1.82
RBFOX1-219ENST00000569895 A0A0U1RQG5 324 aaPredicted RBP26.41■■□□□ 1.82
RBFOX1-219ENST00000569895 TTC22Q5TAA0 569 aa26.41■■□□□ 1.82
RBFOX1-219ENST00000569895 PNMA1Q8ND90 353 aa26.41■■□□□ 1.82
RBFOX1-219ENST00000569895 MORC4Q8TE76 937 aa26.41■■□□□ 1.82
RBFOX1-219ENST00000569895 RUFY2Q8WXA3 655 aa26.41■■□□□ 1.82
RBFOX1-219ENST00000569895 ANKS1AQ92625 1134 aa26.41■■□□□ 1.82
RBFOX1-219ENST00000569895 ZSCAN10Q96SZ4 725 aaPredicted RBP26.41■■□□□ 1.82
RBFOX1-219ENST00000569895 Q9Y3F1 56 aa26.41■■□□□ 1.82
RBFOX1-219ENST00000569895 WDR19Q8NEZ3 1342 aa26.4■■□□□ 1.82
RBFOX1-219ENST00000569895 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.4■■□□□ 1.82
RBFOX1-219ENST00000569895 B4E1Z4 1266 aa26.4■■□□□ 1.82
RBFOX1-219ENST00000569895 NFIBO00712 420 aa26.4■■□□□ 1.82
RBFOX1-219ENST00000569895 CABYRO75952 493 aa26.4■■□□□ 1.82
RBFOX1-219ENST00000569895 FAAP100Q0VG06 881 aa26.4■■□□□ 1.82
RBFOX1-219ENST00000569895 SHHQ15465 462 aa26.4■■□□□ 1.82
RBFOX1-219ENST00000569895 RNF207Q6ZRF8 634 aa26.4■■□□□ 1.82
RBFOX1-219ENST00000569895 EEPD1Q7L9B9 569 aa26.4■■□□□ 1.82
RBFOX1-219ENST00000569895 TLK2Q86UE8 772 aa26.4■■□□□ 1.82
RBFOX1-219ENST00000569895 ZSWIM5Q9P217 1185 aa26.4■■□□□ 1.82
RBFOX1-219ENST00000569895 GNEQ9Y223 722 aaKnown RBP26.4■■□□□ 1.82
RBFOX1-219ENST00000569895 ARVCFO00192 962 aa26.39■■□□□ 1.82
RBFOX1-219ENST00000569895 KIAA1211Q6ZU35 1233 aa26.39■■□□□ 1.82
RBFOX1-219ENST00000569895 UBAC1Q9BSL1 405 aa26.39■■□□□ 1.82
RBFOX1-219ENST00000569895 ASTN1O14525 1302 aa26.39■■□□□ 1.81
RBFOX1-219ENST00000569895 B4DLN1 442 aa26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 TLR3O15455 904 aaKnown RBP26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 DYNC1LI2O43237 492 aaPredicted RBP26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 SMPD1P17405 629 aa26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 CALML3P27482 149 aa26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 CDK7P50613 346 aa26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 ALDH5A1P51649 535 aaPredicted RBP26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 MRPL12P52815 198 aaKnown RBP26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 IRX5P78411 483 aaPredicted RBP26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 FSCN1Q16658 493 aaKnown RBP26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 FAM109BQ6ICB4 259 aaPredicted RBP26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 TAPT1Q6NXT6 567 aa26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 Q7L0L9 218 aa26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 FBXO16Q8IX29 292 aaPredicted RBP26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 CLEC4DQ8WXI8 215 aa26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 RAD50Q92878 1312 aa26.38■■□□□ 1.81
RBFOX1-219ENST00000569895 CTAGE5O15320 804 aa26.37■■□□□ 1.81
RBFOX1-219ENST00000569895 GOLGA8HP0CJ92 632 aa26.37■■□□□ 1.81
RBFOX1-219ENST00000569895 PDE4AP27815 886 aa26.37■■□□□ 1.81
RBFOX1-219ENST00000569895 BEX3Q00994 111 aa26.37■■□□□ 1.81
RBFOX1-219ENST00000569895 FPGSQ05932 587 aa26.37■■□□□ 1.81
RBFOX1-219ENST00000569895 ASPRV1Q53RT3 343 aa26.37■■□□□ 1.81
RBFOX1-219ENST00000569895 PURBQ96QR8 312 aaKnown RBP26.37■■□□□ 1.81
RBFOX1-219ENST00000569895 SEZ6LQ9BYH1 1024 aa26.37■■□□□ 1.81
RBFOX1-219ENST00000569895 UBA5Q9GZZ9 404 aa26.37■■□□□ 1.81
RBFOX1-219ENST00000569895 MAF1Q9H063 256 aa26.37■■□□□ 1.81
RBFOX1-219ENST00000569895 PDGFCQ9NRA1 345 aa26.37■■□□□ 1.81
RBFOX1-219ENST00000569895 MTMR10Q9NXD2 777 aa26.37■■□□□ 1.81
RBFOX1-219ENST00000569895 LAMA3Q16787 3333 aa26.36■■□□□ 1.81
RBFOX1-219ENST00000569895 TIMP1P01033 207 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms