RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 TRANK1O15050 2925 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 ELP1O95163 1332 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 MROH7Q68CQ1 1323 aa14.37□□□□□ -0.11
CAPN3-220ENST00000569827 MCCP23508 829 aa14.36□□□□□ -0.11
CAPN3-220ENST00000569827 CCL23P55773 120 aa14.36□□□□□ -0.11
CAPN3-220ENST00000569827 TNFAIP2Q03169 654 aa14.36□□□□□ -0.11
CAPN3-220ENST00000569827 CTDSPL2Q05D32 466 aa14.36□□□□□ -0.11
CAPN3-220ENST00000569827 GMCL1P1Q8NEA9 526 aa14.36□□□□□ -0.11
CAPN3-220ENST00000569827 NKX2-4Q9H2Z4 354 aa14.36□□□□□ -0.11
CAPN3-220ENST00000569827 MYH7BA7E2Y1 1941 aa14.36□□□□□ -0.11
CAPN3-220ENST00000569827 SCN10AQ9Y5Y9 1956 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 PATL2C9JE40 543 aaKnown RBP14.35□□□□□ -0.11
CAPN3-220ENST00000569827 SMPD1P17405 629 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 STAT2P52630 851 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 PPARAQ07869 468 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 ADGRE1Q14246 886 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 RASIP1Q5U651 963 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.35□□□□□ -0.11
CAPN3-220ENST00000569827 OTOP2Q7RTS6 562 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 TLK2Q86UE8 772 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 TMEM199Q8N511 208 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 NEDD1Q8NHV4 660 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 GPATCH3Q96I76 525 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 TRERF1Q96PN7 1200 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 FSD1Q9BTV5 496 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 NAPBQ9H115 298 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 TRPV6Q9H1D0 765 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 FBXO40Q9UH90 709 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 YBX2Q9Y2T7 364 aaKnown RBP14.35□□□□□ -0.11
CAPN3-220ENST00000569827 BDP1A6H8Y1 2624 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 GRIN2DO15399 1336 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 BRWD1Q9NSI6 2320 aa14.35□□□□□ -0.11
CAPN3-220ENST00000569827 FOXP2O15409 715 aa14.34□□□□□ -0.11
CAPN3-220ENST00000569827 TLR3O15455 904 aaKnown RBP14.34□□□□□ -0.11
CAPN3-220ENST00000569827 DYNC1LI2O43237 492 aaPredicted RBP14.34□□□□□ -0.11
CAPN3-220ENST00000569827 CD4P01730 458 aa14.34□□□□□ -0.11
CAPN3-220ENST00000569827 MYOGP15173 224 aa14.34□□□□□ -0.11
CAPN3-220ENST00000569827 SLC1A4P43007 532 aa14.34□□□□□ -0.11
CAPN3-220ENST00000569827 RABGGTBP53611 331 aa14.34□□□□□ -0.11
CAPN3-220ENST00000569827 OAZ1P54368 228 aa14.34□□□□□ -0.11
CAPN3-220ENST00000569827 FSCN1Q16658 493 aaKnown RBP14.34□□□□□ -0.11
CAPN3-220ENST00000569827 NSMFQ6X4W1 530 aa14.34□□□□□ -0.11
CAPN3-220ENST00000569827 PI4K2BQ8TCG2 481 aa14.34□□□□□ -0.11
CAPN3-220ENST00000569827 GAS2L1Q99501 681 aaPredicted RBP14.34□□□□□ -0.11
CAPN3-220ENST00000569827 WNT8AQ9H1J5 351 aa14.34□□□□□ -0.11
CAPN3-220ENST00000569827 CHMP4BQ9H444 224 aaKnown RBP14.34□□□□□ -0.11
CAPN3-220ENST00000569827 DCTPP1Q9H773 170 aa14.34□□□□□ -0.11
CAPN3-220ENST00000569827 IL23AQ9NPF7 189 aa14.34□□□□□ -0.11
CAPN3-220ENST00000569827 RAPGEFL1Q9UHV5 662 aa14.34□□□□□ -0.11
CAPN3-220ENST00000569827 STX8Q9UNK0 236 aa14.34□□□□□ -0.11
CAPN3-220ENST00000569827 GNEQ9Y223 722 aaKnown RBP14.34□□□□□ -0.11
CAPN3-220ENST00000569827 KIAA1217Q5T5P2 1943 aa14.34□□□□□ -0.11
CAPN3-220ENST00000569827 COL4A4P53420 1690 aaPredicted RBP14.33□□□□□ -0.11
CAPN3-220ENST00000569827 B4GALT4O60513 344 aa14.33□□□□□ -0.12
CAPN3-220ENST00000569827 ZFYP08048 801 aaPredicted RBP14.33□□□□□ -0.12
CAPN3-220ENST00000569827 GNAT2P19087 354 aa14.33□□□□□ -0.12
CAPN3-220ENST00000569827 IGFBP4P22692 258 aa14.33□□□□□ -0.12
CAPN3-220ENST00000569827 PDE4BQ07343 736 aa14.33□□□□□ -0.12
CAPN3-220ENST00000569827 ITGA7Q13683 1181 aa14.33□□□□□ -0.12
CAPN3-220ENST00000569827 CCDC96Q2M329 555 aa14.33□□□□□ -0.12
CAPN3-220ENST00000569827 TJAP1Q5JTD0 557 aa14.33□□□□□ -0.12
CAPN3-220ENST00000569827 VPS53Q5VIR6 699 aa14.33□□□□□ -0.12
CAPN3-220ENST00000569827 PSRC1Q6PGN9 363 aaPredicted RBP14.33□□□□□ -0.12
CAPN3-220ENST00000569827 SCLYQ96I15 445 aa14.33□□□□□ -0.12
CAPN3-220ENST00000569827 HIPK3Q9H422 1215 aa14.33□□□□□ -0.12
CAPN3-220ENST00000569827 IL17RBQ9NRM6 502 aa14.33□□□□□ -0.12
CAPN3-220ENST00000569827 PRR12Q9ULL5 1215 aa14.33□□□□□ -0.12
CAPN3-220ENST00000569827 SLC16A2P36021 539 aa14.32□□□□□ -0.12
CAPN3-220ENST00000569827 ZMYM1Q5SVZ6 1142 aa14.32□□□□□ -0.12
CAPN3-220ENST00000569827 TTBK2Q6IQ55 1244 aa14.32□□□□□ -0.12
CAPN3-220ENST00000569827 TAPT1Q6NXT6 567 aa14.32□□□□□ -0.12
CAPN3-220ENST00000569827 MICALL1Q8N3F8 863 aa14.32□□□□□ -0.12
CAPN3-220ENST00000569827 STAG1Q8WVM7 1258 aa14.32□□□□□ -0.12
CAPN3-220ENST00000569827 NACAP1Q9BZK3 213 aa14.32□□□□□ -0.12
CAPN3-220ENST00000569827 ZNF287Q9HBT7 754 aa14.32□□□□□ -0.12
CAPN3-220ENST00000569827 CCPG1Q9ULG6 757 aa14.32□□□□□ -0.12
CAPN3-220ENST00000569827 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.32□□□□□ -0.12
CAPN3-220ENST00000569827 TSPY2A6NKD2 308 aa14.31□□□□□ -0.12
CAPN3-220ENST00000569827 RANBP6O60518 1105 aaKnown RBP14.31□□□□□ -0.12
CAPN3-220ENST00000569827 FAM160B2Q86V87 743 aa14.31□□□□□ -0.12
CAPN3-220ENST00000569827 CHURC1Q8WUH1 139 aa14.31□□□□□ -0.12
CAPN3-220ENST00000569827 HERVK_113Q902F9 699 aa14.31□□□□□ -0.12
CAPN3-220ENST00000569827 VWCEQ96DN2 955 aa14.31□□□□□ -0.12
CAPN3-220ENST00000569827 GMCL1Q96IK5 515 aa14.31□□□□□ -0.12
CAPN3-220ENST00000569827 NOC4LQ9BVI4 516 aaKnown RBP14.31□□□□□ -0.12
CAPN3-220ENST00000569827 AP5M1Q9H0R1 490 aa14.31□□□□□ -0.12
CAPN3-220ENST00000569827 CYP39A1Q9NYL5 469 aa14.31□□□□□ -0.12
CAPN3-220ENST00000569827 FRMPD2Q68DX3 1309 aaPredicted RBP14.31□□□□□ -0.12
CAPN3-220ENST00000569827 LAMA4Q16363 1823 aa14.31□□□□□ -0.12
CAPN3-220ENST00000569827 ASB14A6NK59 587 aa14.3□□□□□ -0.12
CAPN3-220ENST00000569827 ZBBXA8MT70 800 aa14.3□□□□□ -0.12
CAPN3-220ENST00000569827 NFIBO00712 420 aa14.3□□□□□ -0.12
CAPN3-220ENST00000569827 FGBP02675 491 aa14.3□□□□□ -0.12
CAPN3-220ENST00000569827 SLC3A2P08195 630 aaKnown RBP14.3□□□□□ -0.12
CAPN3-220ENST00000569827 CYP2C9P11712 490 aa14.3□□□□□ -0.12
CAPN3-220ENST00000569827 KIAA1211Q6ZU35 1233 aa14.3□□□□□ -0.12
CAPN3-220ENST00000569827 SLC43A3Q8NBI5 491 aa14.3□□□□□ -0.12
CAPN3-220ENST00000569827 SYMPKQ92797 1274 aaKnown RBP14.3□□□□□ -0.12
CAPN3-220ENST00000569827 TRMT13Q9NUP7 481 aaKnown RBP14.3□□□□□ -0.12
CAPN3-220ENST00000569827 MSRAQ9UJ68 235 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms