RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 NKD1Q969G9 470 aa8.24□□□□□ -1.09
CHD9-220ENST00000569794 NT5C1AQ9BXI3 368 aa8.24□□□□□ -1.09
CHD9-220ENST00000569794 PDLIM7Q9NR12 457 aa8.24□□□□□ -1.09
CHD9-220ENST00000569794 FAM86C2PA6NEL3 165 aa8.23□□□□□ -1.09
CHD9-220ENST00000569794 H0Y8X5 98 aa8.23□□□□□ -1.09
CHD9-220ENST00000569794 ATF2P15336 505 aa8.23□□□□□ -1.09
CHD9-220ENST00000569794 FOXO4P98177 505 aa8.23□□□□□ -1.09
CHD9-220ENST00000569794 BICRALQ6AI39 1079 aa8.23□□□□□ -1.09
CHD9-220ENST00000569794 CYP2R1Q6VVX0 501 aa8.23□□□□□ -1.09
CHD9-220ENST00000569794 LSRQ86X29 649 aaPredicted RBP8.23□□□□□ -1.09
CHD9-220ENST00000569794 CCDC144CPQ8IYA2 1237 aa8.23□□□□□ -1.09
CHD9-220ENST00000569794 A0A1B0GTL3 188 aa8.22□□□□□ -1.09
CHD9-220ENST00000569794 FGF10O15520 208 aaPredicted RBP8.22□□□□□ -1.09
CHD9-220ENST00000569794 ERCC3P19447 782 aa8.22□□□□□ -1.09
CHD9-220ENST00000569794 HTRA3P83110 453 aa8.22□□□□□ -1.09
CHD9-220ENST00000569794 SAPCD2Q86UD0 394 aa8.22□□□□□ -1.09
CHD9-220ENST00000569794 CNOT11Q9UKZ1 510 aaKnown RBP8.22□□□□□ -1.09
CHD9-220ENST00000569794 A0A1W2PQJ5 194 aa8.21□□□□□ -1.1
CHD9-220ENST00000569794 PMS1P54277 932 aaKnown RBP8.21□□□□□ -1.1
CHD9-220ENST00000569794 PRR5P85299 388 aa8.21□□□□□ -1.1
CHD9-220ENST00000569794 SPATA25Q9BR10 227 aa8.21□□□□□ -1.1
CHD9-220ENST00000569794 RNF38Q9H0F5 515 aa8.21□□□□□ -1.1
CHD9-220ENST00000569794 PMF1-BGLAPU3KQ54 211 aa8.21□□□□□ -1.1
CHD9-220ENST00000569794 CORO7P57737 925 aa8.2□□□□□ -1.1
CHD9-220ENST00000569794 ZNF445P59923 1031 aa8.2□□□□□ -1.1
CHD9-220ENST00000569794 ANKRD39Q53RE8 183 aa8.2□□□□□ -1.1
CHD9-220ENST00000569794 UBXN11Q5T124 520 aa8.2□□□□□ -1.1
CHD9-220ENST00000569794 NT5DC1Q5TFE4 455 aa8.2□□□□□ -1.1
CHD9-220ENST00000569794 TDRD10Q5VZ19 366 aaKnown RBP8.2□□□□□ -1.1
CHD9-220ENST00000569794 DCAF15Q66K64 600 aa8.2□□□□□ -1.1
CHD9-220ENST00000569794 HHIPL2Q6UWX4 724 aa8.2□□□□□ -1.1
CHD9-220ENST00000569794 PPFIBP1Q86W92 1011 aa8.2□□□□□ -1.1
CHD9-220ENST00000569794 SMARCC1Q92922 1105 aaPredicted RBP8.2□□□□□ -1.1
CHD9-220ENST00000569794 TMPRSS5Q9H3S3 457 aa8.2□□□□□ -1.1
CHD9-220ENST00000569794 GP6Q9HCN6 339 aa8.2□□□□□ -1.1
CHD9-220ENST00000569794 USP40Q9NVE5 1235 aa8.2□□□□□ -1.1
CHD9-220ENST00000569794 SH3D21A4FU49 640 aa8.19□□□□□ -1.1
CHD9-220ENST00000569794 F8W031 263 aaPredicted RBP8.19□□□□□ -1.1
CHD9-220ENST00000569794 TACR1P25103 407 aa8.19□□□□□ -1.1
CHD9-220ENST00000569794 DLX2Q07687 328 aaPredicted RBP8.19□□□□□ -1.1
CHD9-220ENST00000569794 NOL9Q5SY16 702 aaKnown RBP8.19□□□□□ -1.1
CHD9-220ENST00000569794 AXDND1Q5T1B0 1012 aaPredicted RBP8.19□□□□□ -1.1
CHD9-220ENST00000569794 TAB3Q8N5C8 712 aaPredicted RBP8.19□□□□□ -1.1
CHD9-220ENST00000569794 ZNF526Q8TF50 670 aaPredicted RBP8.19□□□□□ -1.1
CHD9-220ENST00000569794 BRF1Q92994 677 aa8.19□□□□□ -1.1
CHD9-220ENST00000569794 FCRL3Q96P31 734 aaPredicted RBP8.19□□□□□ -1.1
CHD9-220ENST00000569794 ZNRF3Q9ULT6 936 aa8.19□□□□□ -1.1
CHD9-220ENST00000569794 FAN1Q9Y2M0 1017 aa8.19□□□□□ -1.1
CHD9-220ENST00000569794 FHOD1Q9Y613 1164 aa8.19□□□□□ -1.1
CHD9-220ENST00000569794 K7ESM1 405 aa8.18□□□□□ -1.1
CHD9-220ENST00000569794 INSRRP14616 1297 aa8.18□□□□□ -1.1
CHD9-220ENST00000569794 NOP2P46087 812 aaKnown RBP8.18□□□□□ -1.1
CHD9-220ENST00000569794 MRPL58Q14197 206 aaKnown RBP8.18□□□□□ -1.1
CHD9-220ENST00000569794 NLGN2Q8NFZ4 835 aa8.18□□□□□ -1.1
CHD9-220ENST00000569794 PTCHD1Q96NR3 888 aa8.18□□□□□ -1.1
CHD9-220ENST00000569794 ASGR2P07307 311 aa8.17□□□□□ -1.1
CHD9-220ENST00000569794 NCAM1P13591 858 aa8.17□□□□□ -1.1
CHD9-220ENST00000569794 MC3RP41968 323 aa8.17□□□□□ -1.1
CHD9-220ENST00000569794 FERMT3Q86UX7 667 aa8.17□□□□□ -1.1
CHD9-220ENST00000569794 KIAA0825Q8IV33 1275 aa8.17□□□□□ -1.1
CHD9-220ENST00000569794 FIBCD1Q8N539 461 aa8.17□□□□□ -1.1
CHD9-220ENST00000569794 PODXL2Q9NZ53 605 aa8.17□□□□□ -1.1
CHD9-220ENST00000569794 DBR1Q9UK59 544 aaKnown RBP8.17□□□□□ -1.1
CHD9-220ENST00000569794 TBC1D8O95759 1140 aa8.16□□□□□ -1.1
CHD9-220ENST00000569794 IFNGR1P15260 489 aa8.16□□□□□ -1.1
CHD9-220ENST00000569794 CD247P20963 164 aa8.16□□□□□ -1.1
CHD9-220ENST00000569794 L1CAMP32004 1257 aa8.16□□□□□ -1.1
CHD9-220ENST00000569794 B3GNT8Q7Z7M8 397 aa8.16□□□□□ -1.1
CHD9-220ENST00000569794 SPON2Q9BUD6 331 aa8.16□□□□□ -1.1
CHD9-220ENST00000569794 MYRFQ9Y2G1 1151 aa8.16□□□□□ -1.1
CHD9-220ENST00000569794 GLI4P10075 376 aa8.15□□□□□ -1.1
CHD9-220ENST00000569794 IMPDH2P12268 514 aa8.15□□□□□ -1.1
CHD9-220ENST00000569794 PUM1Q14671 1186 aaKnown RBP eCLIP8.15□□□□□ -1.1
CHD9-220ENST00000569794 TM9SF2Q99805 663 aa8.15□□□□□ -1.1
CHD9-220ENST00000569794 SF3B6Q9Y3B4 125 aaKnown RBP8.15□□□□□ -1.1
CHD9-220ENST00000569794 ZNF451Q9Y4E5 1061 aa8.15□□□□□ -1.1
CHD9-220ENST00000569794 DUSP10Q9Y6W6 482 aa8.15□□□□□ -1.1
CHD9-220ENST00000569794 NOBOXO60393 691 aa8.14□□□□□ -1.11
CHD9-220ENST00000569794 CD3EP07766 207 aa8.14□□□□□ -1.11
CHD9-220ENST00000569794 ZNF827Q17R98 1081 aa8.14□□□□□ -1.11
CHD9-220ENST00000569794 CARFQ8N187 725 aa8.14□□□□□ -1.11
CHD9-220ENST00000569794 RGS22Q8NE09 1264 aa8.14□□□□□ -1.11
CHD9-220ENST00000569794 ALG3Q92685 438 aa8.14□□□□□ -1.11
CHD9-220ENST00000569794 GPR20Q99678 358 aa8.14□□□□□ -1.11
CHD9-220ENST00000569794 PALD1Q9ULE6 856 aa8.14□□□□□ -1.11
CHD9-220ENST00000569794 TP53P04637 393 aaPredicted RBP8.13□□□□□ -1.11
CHD9-220ENST00000569794 PMLP29590 882 aa8.13□□□□□ -1.11
CHD9-220ENST00000569794 ZYXQ15942 572 aaKnown RBP8.13□□□□□ -1.11
CHD9-220ENST00000569794 USP48Q86UV5 1035 aa8.13□□□□□ -1.11
CHD9-220ENST00000569794 TSPAN17Q96FV3 270 aa8.13□□□□□ -1.11
CHD9-220ENST00000569794 NOL6Q9H6R4 1146 aaKnown RBP8.13□□□□□ -1.11
CHD9-220ENST00000569794 FAM86C1Q9NVL1 165 aa8.13□□□□□ -1.11
CHD9-220ENST00000569794 ITGA4P13612 1032 aa8.12□□□□□ -1.11
CHD9-220ENST00000569794 CNR2P34972 360 aa8.12□□□□□ -1.11
CHD9-220ENST00000569794 MAGEA10P43363 369 aaPredicted RBP8.12□□□□□ -1.11
CHD9-220ENST00000569794 POU4F1Q01851 419 aa8.12□□□□□ -1.11
CHD9-220ENST00000569794 CCDC27Q2M243 656 aa8.12□□□□□ -1.11
CHD9-220ENST00000569794 UNC5AQ6ZN44 842 aa8.12□□□□□ -1.11
CHD9-220ENST00000569794 DDX1Q92499 740 aaKnown RBP8.12□□□□□ -1.11
CHD9-220ENST00000569794 ZDHHC15Q96MV8 337 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms