RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 TIMP1P01033 207 aa15.47■□□□□ 0.07
SPG7-221ENST00000569720 ICAM1P05362 532 aa15.47■□□□□ 0.07
SPG7-221ENST00000569720 HSPD1P10809 573 aaKnown RBP15.47■□□□□ 0.07
SPG7-221ENST00000569720 TOP1P11387 765 aaKnown RBP15.47■□□□□ 0.07
SPG7-221ENST00000569720 NOVP48745 357 aa15.47■□□□□ 0.07
SPG7-221ENST00000569720 SNAP25P60880 206 aa15.47■□□□□ 0.07
SPG7-221ENST00000569720 NSMFQ6X4W1 530 aa15.47■□□□□ 0.07
SPG7-221ENST00000569720 AP5M1Q9H0R1 490 aa15.47■□□□□ 0.07
SPG7-221ENST00000569720 TCP11L1Q9NUJ3 509 aa15.47■□□□□ 0.07
SPG7-221ENST00000569720 CYP39A1Q9NYL5 469 aa15.47■□□□□ 0.07
SPG7-221ENST00000569720 ZEB2O60315 1214 aa15.46■□□□□ 0.07
SPG7-221ENST00000569720 CABYRO75952 493 aa15.46■□□□□ 0.07
SPG7-221ENST00000569720 PCP11498 1178 aaKnown RBP15.46■□□□□ 0.07
SPG7-221ENST00000569720 CDK7P50613 346 aa15.46■□□□□ 0.07
SPG7-221ENST00000569720 NKX3-2P78367 333 aa15.46■□□□□ 0.07
SPG7-221ENST00000569720 IRX5P78411 483 aaPredicted RBP15.46■□□□□ 0.07
SPG7-221ENST00000569720 NMIQ13287 307 aaPredicted RBP15.46■□□□□ 0.07
SPG7-221ENST00000569720 PPIGQ13427 754 aaKnown RBP eCLIP15.46■□□□□ 0.077e-10■■■■□ 22.5
SPG7-221ENST00000569720 MUM1L1Q5H9M0 696 aa15.46■□□□□ 0.07
SPG7-221ENST00000569720 SYDE2Q5VT97 1194 aa15.46■□□□□ 0.07
SPG7-221ENST00000569720 MFSD5Q6N075 450 aa15.46■□□□□ 0.07
SPG7-221ENST00000569720 RILPL2Q969X0 211 aa15.46■□□□□ 0.07
SPG7-221ENST00000569720 TMEM47Q9BQJ4 181 aa15.46■□□□□ 0.07
SPG7-221ENST00000569720 LNPKQ9C0E8 428 aa15.46■□□□□ 0.07
SPG7-221ENST00000569720 RANBP17Q9H2T7 1088 aaKnown RBP15.46■□□□□ 0.07
SPG7-221ENST00000569720 SEMA6BQ9H3T3 888 aa15.46■□□□□ 0.07
SPG7-221ENST00000569720 RWDD1Q9H446 243 aaPredicted RBP15.46■□□□□ 0.07
SPG7-221ENST00000569720 ADD3Q9UEY8 706 aaKnown RBP15.46■□□□□ 0.07
SPG7-221ENST00000569720 TBX21Q9UL17 535 aa15.46■□□□□ 0.07
SPG7-221ENST00000569720 PNMA2Q9UL42 364 aa15.46■□□□□ 0.07
SPG7-221ENST00000569720 A0A0C4DFX4 3053 aa15.46■□□□□ 0.07
SPG7-221ENST00000569720 CUL9Q8IWT3 2517 aa15.46■□□□□ 0.06
SPG7-221ENST00000569720 CCDC171Q6TFL3 1326 aa15.45■□□□□ 0.06
SPG7-221ENST00000569720 LCTP09848 1927 aa15.45■□□□□ 0.06
SPG7-221ENST00000569720 TMEM265A0A087WTH1 108 aa15.45■□□□□ 0.06
SPG7-221ENST00000569720 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.45■□□□□ 0.06
SPG7-221ENST00000569720 EPHB4P54760 987 aa15.45■□□□□ 0.06
SPG7-221ENST00000569720 BEX3Q00994 111 aa15.45■□□□□ 0.06
SPG7-221ENST00000569720 IQSEC1Q6DN90 963 aa15.45■□□□□ 0.06
SPG7-221ENST00000569720 BTNL9Q6UXG8 535 aa15.45■□□□□ 0.06
SPG7-221ENST00000569720 MFSD6Q6ZSS7 791 aa15.45■□□□□ 0.06
SPG7-221ENST00000569720 RASGRP2Q7LDG7 609 aa15.45■□□□□ 0.06
SPG7-221ENST00000569720 TLK2Q86UE8 772 aa15.45■□□□□ 0.06
SPG7-221ENST00000569720 TMEM199Q8N511 208 aa15.45■□□□□ 0.06
SPG7-221ENST00000569720 CDX2Q99626 313 aaPredicted RBP15.45■□□□□ 0.06
SPG7-221ENST00000569720 RNF41Q9H4P4 317 aaPredicted RBP15.45■□□□□ 0.06
SPG7-221ENST00000569720 VTA1Q9NP79 307 aa15.45■□□□□ 0.06
SPG7-221ENST00000569720 GPCPD1Q9NPB8 672 aa15.45■□□□□ 0.06
SPG7-221ENST00000569720 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.44■□□□□ 0.06
SPG7-221ENST00000569720 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.44■□□□□ 0.06
SPG7-221ENST00000569720 CTAGE5O15320 804 aa15.44■□□□□ 0.06
SPG7-221ENST00000569720 SLC16A2P36021 539 aa15.44■□□□□ 0.06
SPG7-221ENST00000569720 HAND2P61296 217 aa15.44■□□□□ 0.06
SPG7-221ENST00000569720 FSCN1Q16658 493 aaKnown RBP15.44■□□□□ 0.06
SPG7-221ENST00000569720 AKNAD1Q5T1N1 836 aa15.44■□□□□ 0.06
SPG7-221ENST00000569720 TTBK2Q6IQ55 1244 aa15.44■□□□□ 0.06
SPG7-221ENST00000569720 ZNF589Q86UQ0 364 aaPredicted RBP15.44■□□□□ 0.06
SPG7-221ENST00000569720 TTC14Q96N46 770 aa15.44■□□□□ 0.06
SPG7-221ENST00000569720 SEZ6LQ9BYH1 1024 aa15.44■□□□□ 0.06
SPG7-221ENST00000569720 GNEQ9Y223 722 aaKnown RBP15.44■□□□□ 0.06
SPG7-221ENST00000569720 Q9Y3F1 56 aa15.44■□□□□ 0.06
SPG7-221ENST00000569720 FRMPD2Q68DX3 1309 aaPredicted RBP15.43■□□□□ 0.06
SPG7-221ENST00000569720 LOC102724159A0A0B4J2E5 919 aa15.43■□□□□ 0.06
SPG7-221ENST00000569720 PTPDC1A2A3K4 754 aa15.43■□□□□ 0.06
SPG7-221ENST00000569720 DYNC1LI2O43237 492 aaPredicted RBP15.43■□□□□ 0.06
SPG7-221ENST00000569720 SMPD1P17405 629 aa15.43■□□□□ 0.06
SPG7-221ENST00000569720 PWP2Q15269 919 aaKnown RBP15.43■□□□□ 0.06
SPG7-221ENST00000569720 B4GALNT3Q6L9W6 998 aa15.43■□□□□ 0.06
SPG7-221ENST00000569720 CXCL17Q6UXB2 119 aa15.43■□□□□ 0.06
SPG7-221ENST00000569720 KIAA1211Q6ZU35 1233 aa15.43■□□□□ 0.06
SPG7-221ENST00000569720 EEPD1Q7L9B9 569 aa15.43■□□□□ 0.06
SPG7-221ENST00000569720 FBXO16Q8IX29 292 aaPredicted RBP15.43■□□□□ 0.06
SPG7-221ENST00000569720 FAM126BQ8IXS8 530 aa15.43■□□□□ 0.06
SPG7-221ENST00000569720 SMC5Q8IY18 1101 aa15.43■□□□□ 0.06
SPG7-221ENST00000569720 ESR2Q92731 530 aa15.43■□□□□ 0.06
SPG7-221ENST00000569720 MPHOSPH6Q99547 160 aaKnown RBP15.43■□□□□ 0.06
SPG7-221ENST00000569720 ASTN1O14525 1302 aa15.43■□□□□ 0.06
SPG7-221ENST00000569720 PDHBP11177 359 aa15.42■□□□□ 0.06
SPG7-221ENST00000569720 SDSP20132 328 aa15.42■□□□□ 0.06
SPG7-221ENST00000569720 NT5C2P49902 561 aa15.42■□□□□ 0.06
SPG7-221ENST00000569720 BAATQ14032 418 aaPredicted RBP15.42■□□□□ 0.06
SPG7-221ENST00000569720 TAPT1Q6NXT6 567 aa15.42■□□□□ 0.06
SPG7-221ENST00000569720 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.42■□□□□ 0.06
SPG7-221ENST00000569720 MORC4Q8TE76 937 aa15.42■□□□□ 0.06
SPG7-221ENST00000569720 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.42■□□□□ 0.061e-17■■■■□ 21.1
SPG7-221ENST00000569720 PPP1R12CQ9BZL4 782 aa15.42■□□□□ 0.06
SPG7-221ENST00000569720 TTYH1Q9H313 450 aaPredicted RBP15.42■□□□□ 0.06
SPG7-221ENST00000569720 PDGFCQ9NRA1 345 aa15.42■□□□□ 0.06
SPG7-221ENST00000569720 LAMA4Q16363 1823 aa15.42■□□□□ 0.06
SPG7-221ENST00000569720 ZNF213O14771 459 aa15.41■□□□□ 0.06
SPG7-221ENST00000569720 CD4P01730 458 aa15.41■□□□□ 0.06
SPG7-221ENST00000569720 ALDH5A1P51649 535 aaPredicted RBP15.41■□□□□ 0.06
SPG7-221ENST00000569720 ZNF543Q08ER8 600 aa15.41■□□□□ 0.06
SPG7-221ENST00000569720 ITGA7Q13683 1181 aa15.41■□□□□ 0.06
SPG7-221ENST00000569720 CCDC178Q5BJE1 867 aa15.41■□□□□ 0.06
SPG7-221ENST00000569720 PSRC1Q6PGN9 363 aaPredicted RBP15.41■□□□□ 0.06
SPG7-221ENST00000569720 CHD1LQ86WJ1 897 aa15.41■□□□□ 0.06
SPG7-221ENST00000569720 SLC43A3Q8NBI5 491 aa15.41■□□□□ 0.06
SPG7-221ENST00000569720 MAFAQ8NHW3 353 aaPredicted RBP15.41■□□□□ 0.06
SPG7-221ENST00000569720 MYLIPQ8WY64 445 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms