RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 NFIBO00712 420 aa12.91□□□□□ -0.34
SHCBP1-207ENST00000569702 SEPT4O43236 478 aa12.91□□□□□ -0.34
SHCBP1-207ENST00000569702 MSCO60682 206 aa12.91□□□□□ -0.34
SHCBP1-207ENST00000569702 FARP2O94887 1054 aaPredicted RBP12.91□□□□□ -0.34
SHCBP1-207ENST00000569702 SNAI1O95863 264 aaPredicted RBP12.91□□□□□ -0.34
SHCBP1-207ENST00000569702 EXOSC10Q01780 885 aaKnown RBP12.91□□□□□ -0.34
SHCBP1-207ENST00000569702 KRT32Q14532 448 aa12.91□□□□□ -0.34
SHCBP1-207ENST00000569702 CDC37Q16543 378 aaPredicted RBP12.91□□□□□ -0.34
SHCBP1-207ENST00000569702 SLC35G1Q2M3R5 365 aa12.91□□□□□ -0.34
SHCBP1-207ENST00000569702 ASTN1O14525 1302 aa12.9□□□□□ -0.34
SHCBP1-207ENST00000569702 SOWAHBA6NEL2 793 aa12.9□□□□□ -0.34
SHCBP1-207ENST00000569702 DDAH1O94760 285 aa12.9□□□□□ -0.34
SHCBP1-207ENST00000569702 ZNF865P0CJ78 1059 aaPredicted RBP12.9□□□□□ -0.34
SHCBP1-207ENST00000569702 CNGA1P29973 690 aa12.9□□□□□ -0.34
SHCBP1-207ENST00000569702 QRICH1Q2TAL8 776 aa12.9□□□□□ -0.34
SHCBP1-207ENST00000569702 NSMFQ6X4W1 530 aa12.9□□□□□ -0.34
SHCBP1-207ENST00000569702 DHX32Q7L7V1 743 aaKnown RBP12.9□□□□□ -0.34
SHCBP1-207ENST00000569702 SGMS1Q86VZ5 419 aa12.9□□□□□ -0.34
SHCBP1-207ENST00000569702 ZNF654Q8IZM8 581 aa12.9□□□□□ -0.34
SHCBP1-207ENST00000569702 RGS22Q8NE09 1264 aa12.9□□□□□ -0.34
SHCBP1-207ENST00000569702 MAF1Q9H063 256 aa12.9□□□□□ -0.34
SHCBP1-207ENST00000569702 RIOX1Q9H6W3 641 aa12.9□□□□□ -0.34
SHCBP1-207ENST00000569702 VAT1LQ9HCJ6 419 aa12.9□□□□□ -0.34
SHCBP1-207ENST00000569702 DNAH12Q6ZR08 3092 aa12.9□□□□□ -0.34
SHCBP1-207ENST00000569702 CYTH3O43739 400 aa12.89□□□□□ -0.35
SHCBP1-207ENST00000569702 HMGB1P09429 215 aaKnown RBP12.89□□□□□ -0.35
SHCBP1-207ENST00000569702 BAATQ14032 418 aaPredicted RBP12.89□□□□□ -0.35
SHCBP1-207ENST00000569702 USH1GQ495M9 461 aa12.89□□□□□ -0.35
SHCBP1-207ENST00000569702 CCDC144CPQ8IYA2 1237 aa12.89□□□□□ -0.35
SHCBP1-207ENST00000569702 DIS3LQ8TF46 1054 aaKnown RBP12.89□□□□□ -0.35
SHCBP1-207ENST00000569702 PAWRQ96IZ0 340 aaKnown RBP12.89□□□□□ -0.35
SHCBP1-207ENST00000569702 LRRC2Q9BYS8 371 aa12.89□□□□□ -0.35
SHCBP1-207ENST00000569702 KATNBL1Q9H079 304 aa12.89□□□□□ -0.35
SHCBP1-207ENST00000569702 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.89□□□□□ -0.35
SHCBP1-207ENST00000569702 CNPY2Q9Y2B0 182 aa12.89□□□□□ -0.35
SHCBP1-207ENST00000569702 SNX14Q9Y5W7 946 aa12.89□□□□□ -0.35
SHCBP1-207ENST00000569702 ABCB11O95342 1321 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 CCDC69A6NI79 296 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 ZBTB5O15062 677 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 DHX16O60231 1041 aaKnown RBP12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 PPP1R11O60927 126 aaPredicted RBP12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 SMARCA1P28370 1054 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 KIF5BP33176 963 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 RPS6P62753 249 aaKnown RBP12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 ACVR2BQ13705 512 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 NFXL1Q6ZNB6 911 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 ARMCX2Q7L311 632 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 NECAB2Q7Z6G3 386 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 FBXO11Q86XK2 927 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 MORC4Q8TE76 937 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 NUP133Q8WUM0 1156 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 PURBQ96QR8 312 aaKnown RBP12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 MYL10Q9BUA6 226 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 AMNQ9BXJ7 453 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 USP26Q9BXU7 913 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 ABHD16BQ9H3Z7 469 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 LCTP09848 1927 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 FRMPD3Q5JV73 1810 aa12.88□□□□□ -0.35
SHCBP1-207ENST00000569702 BAZ2BQ9UIF8 2168 aaKnown RBP12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 MCM3APO60318 1980 aa12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 LOC102724159A0A0B4J2E5 919 aa12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 ASB14A6NK59 587 aa12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 CALM1P0DP23 149 aa12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 CALM2P0DP24 149 aa12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 CALM3P0DP25 149 aa12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 COL6A1P12109 1028 aa12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 PWP2Q15269 919 aaKnown RBP12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 SLC30A10Q6XR72 485 aa12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 RNF207Q6ZRF8 634 aa12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 CTCFLQ8NI51 663 aaPredicted RBP12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 TCEANC2Q96MN5 208 aa12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 PIGSQ96S52 555 aa12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 SPZ1Q9BXG8 430 aa12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 MRPL11Q9Y3B7 192 aaKnown RBP12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 SLC12A7Q9Y666 1083 aa12.87□□□□□ -0.35
SHCBP1-207ENST00000569702 PNMA6FA0A0J9YX94 578 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 PTPDC1A2A3K4 754 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 DNM1LO00429 736 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 OPLAHO14841 1288 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 AKR1A1P14550 325 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 GNAQP50148 359 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 GHRHRQ02643 423 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 ANO1Q5XXA6 986 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 APOA5Q6Q788 366 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 MCF2L2Q86YR7 1114 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 FBXL16Q8N461 479 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 FANCBQ8NB91 859 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 ARRDC4Q8NCT1 418 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 TBC1D5Q92609 795 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 JAKMIP1Q96N16 626 aaKnown RBP12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 LZTS2Q9BRK4 669 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 HTATIP2Q9BUP3 242 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 C11orf49Q9H6J7 331 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 ADD3Q9UEY8 706 aaKnown RBP12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 ZHX1Q9UKY1 873 aaPredicted RBP12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 BRPF3Q9ULD4 1205 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 FAM184BQ9ULE4 1060 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 PCDHA1Q9Y5I3 950 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 MYH6P13533 1939 aa12.86□□□□□ -0.35
SHCBP1-207ENST00000569702 RARBP10826 455 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms