RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 MTMR8Q96EF0 704 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 RRP36Q96EU6 259 aaKnown RBP6.11□□□□□ -1.43
SF3B3-213ENST00000569687 PRIMPOLQ96LW4 560 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 XPO4Q9C0E2 1151 aaKnown RBP6.11□□□□□ -1.43
SF3B3-213ENST00000569687 MTFR1LQ9H019 292 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 VPS33BQ9H267 617 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 C6orf50Q9HD87 102 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 DDX4Q9NQI0 724 aaKnown RBP6.11□□□□□ -1.43
SF3B3-213ENST00000569687 IFNKQ9P0W0 207 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 NYAP2Q9P242 653 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 PI4KBQ9UBF8 816 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 PYCARDQ9ULZ3 195 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 LAMB1P07942 1786 aa6.11□□□□□ -1.43
SF3B3-213ENST00000569687 PNMA6FA0A0J9YX94 578 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 VWA3AA6NCI4 1184 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 SMCO2A6NFE2 343 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 LRRC10BA6NIK2 292 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 POM121CA8CG34 1229 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 PPP1R3GB7ZBB8 358 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 ENTPD3O75355 529 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 SLC34A2O95436 690 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 TUBB4AP04350 444 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 HLA-DOAP06340 250 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 AKR1B1P15121 316 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 POLD1P28340 1107 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 CHRNA5P30532 468 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 UBASH3AP57075 661 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 ZNF543Q08ER8 600 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 R3HDM1Q15032 1099 aaKnown RBP6.1□□□□□ -1.43
SF3B3-213ENST00000569687 GPATCH4Q5T3I0 446 aaKnown RBP6.1□□□□□ -1.43
SF3B3-213ENST00000569687 SPATA1Q5VX52 437 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 ASTLQ6HA08 431 aaPredicted RBP6.1□□□□□ -1.43
SF3B3-213ENST00000569687 PPP1R18Q6NYC8 613 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 TATDN1Q6P1N9 297 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 USP17L2Q6R6M4 530 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 DTHD1Q6ZMT9 781 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 AK8Q96MA6 479 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 NAP1L5Q96NT1 182 aaPredicted RBP6.1□□□□□ -1.43
SF3B3-213ENST00000569687 GTPBP4Q9BZE4 634 aaKnown RBP6.1□□□□□ -1.43
SF3B3-213ENST00000569687 GLT8D2Q9H1C3 349 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 CUEDC2Q9H467 287 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 KANSL2Q9H9L4 492 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 FANCLQ9NW38 375 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 SYNPO2Q9UMS6 1093 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 ECM29Q5VYK3 1845 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 KIF13BQ9NQT8 1826 aa6.1□□□□□ -1.43
SF3B3-213ENST00000569687 F8W031 263 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-213ENST00000569687 SLC26A4O43511 780 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 ECE2O60344 883 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 GOLGA8HP0CJ92 632 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 SKILP12757 684 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 ATP1A3P13637 1013 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 LMOD1P29536 600 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-213ENST00000569687 HOXA7P31268 230 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-213ENST00000569687 MCM7P33993 719 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 MMP14P50281 582 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 SCNN1DP51172 638 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 NAPAP54920 295 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 CCZ1BP86790 482 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 CCZ1P86791 482 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-213ENST00000569687 FMR1Q06787 632 aaKnown RBP eCLIP6.09□□□□□ -1.431e-9■■□□□ 13.7
SF3B3-213ENST00000569687 LRMPQ12912 555 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 TBX2Q13207 712 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-213ENST00000569687 CUL4BQ13620 913 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 PDIA5Q14554 519 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 KCNB1Q14721 858 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 NR1I3Q14994 352 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 NONOQ15233 471 aaKnown RBP eCLIP6.09□□□□□ -1.43
SF3B3-213ENST00000569687 SLC4A8Q2Y0W8 1093 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 SOGA3Q5TF21 947 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 MCTP2Q6DN12 878 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 ISM2Q6H9L7 571 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 HEATR3Q7Z4Q2 680 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 SIAH1Q8IUQ4 282 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 VSTM4Q8IW00 320 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 ZFPM1Q8IX07 1006 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 RTKN2Q8IZC4 609 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 PDILTQ8N807 584 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 CCDC150Q8NCX0 1101 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 DCAF4Q8WV16 495 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 GPKOWQ92917 476 aaPredicted RBP eCLIP6.09□□□□□ -1.43
SF3B3-213ENST00000569687 GLMNQ92990 594 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 DHX58Q96C10 678 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 MTMR9Q96QG7 549 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 MED15Q96RN5 788 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 PIGSQ96S52 555 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 MXD3Q9BW11 206 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 TMEM60Q9H2L4 133 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 TMX1Q9H3N1 280 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 JMJD4Q9H9V9 463 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 MAGEF1Q9HAY2 307 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 KCNQ5Q9NR82 932 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 KBTBD4Q9NVX7 518 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 RMND1Q9NWS8 449 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 FAM198AQ9UFP1 575 aa6.09□□□□□ -1.43
SF3B3-213ENST00000569687 SEC63Q9UGP8 760 aaKnown RBP6.09□□□□□ -1.43
SF3B3-213ENST00000569687 R3HCC1Q9Y3T6 440 aaKnown RBP6.09□□□□□ -1.43
SF3B3-213ENST00000569687 DDX60LQ5H9U9 1706 aaKnown RBP6.08□□□□□ -1.44
SF3B3-213ENST00000569687 ATRNL1Q5VV63 1379 aa6.08□□□□□ -1.44
SF3B3-213ENST00000569687 PSDA5PKW4 1024 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms