RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 PITPNM2Q9BZ72 1349 aa25.61■■□□□ 1.69
VCPKMT-205ENST00000569518 CCNT1O60563 726 aaKnown RBP25.6■■□□□ 1.69
VCPKMT-205ENST00000569518 C11orf57Q6ZUT1 292 aaPredicted RBP25.6■■□□□ 1.69
VCPKMT-205ENST00000569518 ILDR2Q71H61 639 aa25.6■■□□□ 1.69
VCPKMT-205ENST00000569518 KIAA1683Q9H0B3 1180 aa25.6■■□□□ 1.69
VCPKMT-205ENST00000569518 ANO10Q9NW15 660 aa25.6■■□□□ 1.69
VCPKMT-205ENST00000569518 C9orf131Q5VYM1 1079 aa25.6■■□□□ 1.69
VCPKMT-205ENST00000569518 CHURC1Q8WUH1 139 aa25.6■■□□□ 1.69
VCPKMT-205ENST00000569518 SERTAD1Q9UHV2 236 aa25.6■■□□□ 1.69
VCPKMT-205ENST00000569518 POLR2AP24928 1970 aaKnown RBP25.6■■□□□ 1.69
VCPKMT-205ENST00000569518 A0A087WWV3 80 aa25.59■■□□□ 1.69
VCPKMT-205ENST00000569518 NEMFO60524 1076 aa25.59■■□□□ 1.69
VCPKMT-205ENST00000569518 ZNF165P49910 485 aa25.59■■□□□ 1.69
VCPKMT-205ENST00000569518 PNOCQ13519 176 aa25.59■■□□□ 1.69
VCPKMT-205ENST00000569518 FAM160B2Q86V87 743 aa25.59■■□□□ 1.69
VCPKMT-205ENST00000569518 PDILTQ8N807 584 aa25.59■■□□□ 1.69
VCPKMT-205ENST00000569518 FEZ1Q99689 392 aa25.59■■□□□ 1.69
VCPKMT-205ENST00000569518 RANBP17Q9H2T7 1088 aaKnown RBP25.59■■□□□ 1.69
VCPKMT-205ENST00000569518 MEIS2O14770 477 aa25.58■■□□□ 1.69
VCPKMT-205ENST00000569518 OR52Z1P0C646 297 aa25.58■■□□□ 1.69
VCPKMT-205ENST00000569518 PRAMEF18Q5VWM3 479 aa25.58■■□□□ 1.69
VCPKMT-205ENST00000569518 DTHD1Q6ZMT9 781 aa25.58■■□□□ 1.69
VCPKMT-205ENST00000569518 LPAR1Q92633 364 aa25.58■■□□□ 1.69
VCPKMT-205ENST00000569518 ADARB2Q9NS39 739 aaKnown RBP25.58■■□□□ 1.69
VCPKMT-205ENST00000569518 FEM1BQ9UK73 627 aa25.58■■□□□ 1.69
VCPKMT-205ENST00000569518 USP17L15C9J2P7 530 aa25.58■■□□□ 1.68
VCPKMT-205ENST00000569518 USP17L13C9JLJ4 530 aa25.58■■□□□ 1.68
VCPKMT-205ENST00000569518 USP17L11C9JVI0 530 aa25.58■■□□□ 1.68
VCPKMT-205ENST00000569518 USP17L18D6R9N7 530 aa25.58■■□□□ 1.68
VCPKMT-205ENST00000569518 USP17L22D6RA61 530 aa25.58■■□□□ 1.68
VCPKMT-205ENST00000569518 USP17L17D6RBQ6 530 aa25.58■■□□□ 1.68
VCPKMT-205ENST00000569518 USP17L19D6RCP7 530 aa25.58■■□□□ 1.68
VCPKMT-205ENST00000569518 USP17L20D6RJB6 530 aa25.58■■□□□ 1.68
VCPKMT-205ENST00000569518 USP17L24Q0WX57 530 aa25.58■■□□□ 1.68
VCPKMT-205ENST00000569518 USP17L6PQ6QN14 398 aa25.58■■□□□ 1.68
VCPKMT-205ENST00000569518 LUZP1Q86V48 1076 aa25.58■■□□□ 1.68
VCPKMT-205ENST00000569518 SCYL3Q8IZE3 742 aa25.58■■□□□ 1.68
VCPKMT-205ENST00000569518 SMCHD1A6NHR9 2005 aa25.57■■□□□ 1.68
VCPKMT-205ENST00000569518 OPLAHO14841 1288 aa25.57■■□□□ 1.68
VCPKMT-205ENST00000569518 FOXN1O15353 648 aa25.57■■□□□ 1.68
VCPKMT-205ENST00000569518 LMOD1P29536 600 aaPredicted RBP25.57■■□□□ 1.68
VCPKMT-205ENST00000569518 E2F4Q16254 413 aa25.57■■□□□ 1.68
VCPKMT-205ENST00000569518 USH1GQ495M9 461 aa25.57■■□□□ 1.68
VCPKMT-205ENST00000569518 KANK3Q6NY19 840 aa25.57■■□□□ 1.68
VCPKMT-205ENST00000569518 SLFN14P0C7P3 912 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 POSTNQ15063 836 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 USP25Q9UHP3 1055 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 HOOK1Q9UJC3 728 aaKnown RBP25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 PHIPQ8WWQ0 1821 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 WDR46O15213 610 aaKnown RBP25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 TRAF1Q13077 416 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 AP3B2Q13367 1082 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 IQCB1Q15051 598 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 DPCR1Q3MIW9 517 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 PPP4R3AQ6IN85 833 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 POTEDQ86YR6 584 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 TEX2Q8IWB9 1127 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 DHX58Q96C10 678 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 MTMR9Q96QG7 549 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 WRNIP1Q96S55 665 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 WDR18Q9BV38 432 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 FBXO28Q9NVF7 368 aa25.56■■□□□ 1.68
VCPKMT-205ENST00000569518 TDP2O95551 362 aa25.55■■□□□ 1.68
VCPKMT-205ENST00000569518 TAL1P17542 331 aaPredicted RBP25.55■■□□□ 1.68
VCPKMT-205ENST00000569518 NLRP12P59046 1061 aa25.55■■□□□ 1.68
VCPKMT-205ENST00000569518 MCTP2Q6DN12 878 aa25.55■■□□□ 1.68
VCPKMT-205ENST00000569518 SH3RF1Q7Z6J0 888 aa25.55■■□□□ 1.68
VCPKMT-205ENST00000569518 CEP57L1Q8IYX8 460 aa25.55■■□□□ 1.68
VCPKMT-205ENST00000569518 KIFC2Q96AC6 838 aa25.55■■□□□ 1.68
VCPKMT-205ENST00000569518 P2RX7Q99572 595 aaKnown RBP25.55■■□□□ 1.68
VCPKMT-205ENST00000569518 SLC37A4O43826 429 aa25.54■■□□□ 1.68
VCPKMT-205ENST00000569518 NT5DC1Q5TFE4 455 aa25.54■■□□□ 1.68
VCPKMT-205ENST00000569518 CRYGNQ8WXF5 182 aa25.54■■□□□ 1.68
VCPKMT-205ENST00000569518 KLRG1Q96E93 195 aa25.54■■□□□ 1.68
VCPKMT-205ENST00000569518 PYM1Q9BRP8 204 aaKnown RBP25.54■■□□□ 1.68
VCPKMT-205ENST00000569518 ANO3Q9BYT9 981 aa25.54■■□□□ 1.68
VCPKMT-205ENST00000569518 PCDHA5Q9Y5H7 936 aa25.54■■□□□ 1.68
VCPKMT-205ENST00000569518 BIN1O00499 593 aa25.53■■□□□ 1.68
VCPKMT-205ENST00000569518 PRR29P0C7W0 189 aa25.53■■□□□ 1.68
VCPKMT-205ENST00000569518 ZKSCAN4Q969J2 545 aaPredicted RBP25.53■■□□□ 1.68
VCPKMT-205ENST00000569518 AK8Q96MA6 479 aa25.53■■□□□ 1.68
VCPKMT-205ENST00000569518 PAPPA2Q9BXP8 1791 aa25.53■■□□□ 1.68
VCPKMT-205ENST00000569518 SRCAPQ6ZRS2 3230 aa25.53■■□□□ 1.68
VCPKMT-205ENST00000569518 PIK3CDO00329 1044 aa25.53■■□□□ 1.68
VCPKMT-205ENST00000569518 PTPRAP18433 802 aa25.53■■□□□ 1.68
VCPKMT-205ENST00000569518 SARSP49591 514 aaKnown RBP25.53■■□□□ 1.68
VCPKMT-205ENST00000569518 ZRSR1Q15695 479 aaKnown RBP25.53■■□□□ 1.68
VCPKMT-205ENST00000569518 GRAMD1CQ8IYS0 662 aa25.53■■□□□ 1.68
VCPKMT-205ENST00000569518 SPATA20Q8TB22 786 aa25.53■■□□□ 1.68
VCPKMT-205ENST00000569518 L3MBTL3Q96JM7 780 aaPredicted RBP25.53■■□□□ 1.68
VCPKMT-205ENST00000569518 FZD1Q9UP38 647 aa25.53■■□□□ 1.68
VCPKMT-205ENST00000569518 PARP14Q460N5 1801 aa25.52■■□□□ 1.68
VCPKMT-205ENST00000569518 GCFC2P16383 781 aaKnown RBP25.52■■□□□ 1.68
VCPKMT-205ENST00000569518 MTMR2Q13614 643 aa25.52■■□□□ 1.68
VCPKMT-205ENST00000569518 SUPT20HL1Q3ZLR7 823 aa25.52■■□□□ 1.68
VCPKMT-205ENST00000569518 PDXDC2PQ6P474 469 aa25.52■■□□□ 1.68
VCPKMT-205ENST00000569518 IQUBQ8NA54 791 aa25.52■■□□□ 1.68
VCPKMT-205ENST00000569518 CCSER1Q9C0I3 900 aa25.52■■□□□ 1.68
VCPKMT-205ENST00000569518 EMILIN3Q9NT22 766 aa25.52■■□□□ 1.68
VCPKMT-205ENST00000569518 AP5Z1O43299 807 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms