RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 FEM1BQ9UK73 627 aa8.73□□□□□ -1.01
CDH13-214ENST00000569455 MORC2Q9Y6X9 1032 aaPredicted RBP8.73□□□□□ -1.01
CDH13-214ENST00000569455 C19orf81C9J6K1 198 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 CUTAO60888 179 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 ATP2B1P20020 1258 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 TOB1P50616 345 aaPredicted RBP8.72□□□□□ -1.01
CDH13-214ENST00000569455 ZNF157P51786 506 aaPredicted RBP8.72□□□□□ -1.01
CDH13-214ENST00000569455 NONOQ15233 471 aaKnown RBP eCLIP8.72□□□□□ -1.01
CDH13-214ENST00000569455 PTPAQ15257 358 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 ZYXQ15942 572 aaKnown RBP8.72□□□□□ -1.01
CDH13-214ENST00000569455 FBXO11Q86XK2 927 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 CCAR1Q8IX12 1150 aaKnown RBP8.72□□□□□ -1.01
CDH13-214ENST00000569455 KRI1Q8N9T8 703 aaKnown RBP8.72□□□□□ -1.01
CDH13-214ENST00000569455 ZNF280CQ8ND82 737 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 MRPS27Q92552 414 aaKnown RBP8.72□□□□□ -1.01
CDH13-214ENST00000569455 CUL5Q93034 780 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 COA7Q96BR5 231 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 SLC10A4Q96EP9 437 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 RIC8AQ9NPQ8 531 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.72□□□□□ -1.01
CDH13-214ENST00000569455 DDX19AQ9NUU7 478 aaKnown RBP8.72□□□□□ -1.01
CDH13-214ENST00000569455 TMEM63CQ9P1W3 806 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 PNMA2Q9UL42 364 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 PRR12Q9ULL5 1215 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 PCDHA7Q9UN72 937 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 PCDHA6Q9UN73 950 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 PCDHA8Q9Y5H6 950 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 PCDHA1Q9Y5I3 950 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 PHIPQ8WWQ0 1821 aa8.72□□□□□ -1.01
CDH13-214ENST00000569455 FAM205CA6NFA0 338 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 SPDYE5A6NIY4 337 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 M0R2N6 131 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 KINO60870 393 aaKnown RBP8.71□□□□□ -1.02
CDH13-214ENST00000569455 SLC10A3P09131 477 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 PTPRAP18433 802 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 MARCKSP29966 332 aaPredicted RBP8.71□□□□□ -1.02
CDH13-214ENST00000569455 BACE1P56817 501 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 ZNF445P59923 1031 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 FAM160A1Q05DH4 1040 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 PPATQ06203 517 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 FMR1Q06787 632 aaKnown RBP eCLIP8.71□□□□□ -1.02
CDH13-214ENST00000569455 SPP2Q13103 211 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 ORC2Q13416 577 aaPredicted RBP8.71□□□□□ -1.02
CDH13-214ENST00000569455 ZSCAN23Q3MJ62 389 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 DLK2Q6UY11 383 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.71□□□□□ -1.02
CDH13-214ENST00000569455 ERO1BQ86YB8 467 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 FSIP1Q8NA03 581 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 ZKSCAN4Q969J2 545 aaPredicted RBP8.71□□□□□ -1.02
CDH13-214ENST00000569455 FERMT2Q96AC1 680 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 NUP62CLQ9H1M0 184 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 PSTPIP2Q9H939 334 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.71□□□□□ -1.02
CDH13-214ENST00000569455 PCDHB6Q9Y5E3 794 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 OTOFQ9HC10 1997 aa8.71□□□□□ -1.02
CDH13-214ENST00000569455 FAM155AB1AL88 458 aaPredicted RBP8.7□□□□□ -1.02
CDH13-214ENST00000569455 LAD1O00515 517 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 DLL1O00548 723 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 CTAGE5O15320 804 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 PPP1R11O60927 126 aaPredicted RBP8.7□□□□□ -1.02
CDH13-214ENST00000569455 FDX1P10109 184 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 LIG1P18858 919 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 CMA1P23946 247 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 FXR1P51114 621 aaKnown RBP eCLIP8.7□□□□□ -1.02
CDH13-214ENST00000569455 SREBF2Q12772 1141 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 PPIL2Q13356 520 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 MTMR2Q13614 643 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 VGLL4Q14135 290 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 ZNF174Q15697 407 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 INF2Q27J81 1249 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 EARS2Q5JPH6 523 aaKnown RBP8.7□□□□□ -1.02
CDH13-214ENST00000569455 KIAA1755Q5JYT7 1200 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 AXDND1Q5T1B0 1012 aaPredicted RBP8.7□□□□□ -1.02
CDH13-214ENST00000569455 SPRYD7Q5W111 196 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 NEK8Q86SG6 692 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 CCDC84Q86UT8 332 aaPredicted RBP8.7□□□□□ -1.02
CDH13-214ENST00000569455 ZNF579Q8NAF0 562 aaKnown RBP8.7□□□□□ -1.02
CDH13-214ENST00000569455 PRPF38AQ8NAV1 312 aaKnown RBP8.7□□□□□ -1.02
CDH13-214ENST00000569455 RASGRP4Q8TDF6 673 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 KIFC2Q96AC6 838 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 C12orf42Q96LP6 360 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 NAP1L4Q99733 375 aaKnown RBP8.7□□□□□ -1.02
CDH13-214ENST00000569455 SLF1Q9BQI6 1058 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 TANGO6Q9C0B7 1094 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 RANBP17Q9H2T7 1088 aaKnown RBP8.7□□□□□ -1.02
CDH13-214ENST00000569455 ZCCHC17Q9NP64 241 aaKnown RBP8.7□□□□□ -1.02
CDH13-214ENST00000569455 DACT1Q9NYF0 836 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 FAM13BQ9NYF5 915 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 TMOD4Q9NZQ9 345 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 BIN2Q9UBW5 565 aaPredicted RBP8.7□□□□□ -1.02
CDH13-214ENST00000569455 CTDP1Q9Y5B0 961 aaPredicted RBP8.7□□□□□ -1.02
CDH13-214ENST00000569455 ZHX2Q9Y6X8 837 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 PARP14Q460N5 1801 aa8.7□□□□□ -1.02
CDH13-214ENST00000569455 SYCE3A1L190 88 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 GOLGA6L3A6NEY3 463 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 MANSC4A6NHS7 340 aaPredicted RBP8.69□□□□□ -1.02
CDH13-214ENST00000569455 CXCL11O14625 94 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 FOSP01100 380 aaPredicted RBP8.69□□□□□ -1.02
CDH13-214ENST00000569455 VCAM1P19320 739 aa8.69□□□□□ -1.02
CDH13-214ENST00000569455 PTPREP23469 700 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms