RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 DDR1Q08345 913 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 PDE4DQ08499 809 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 TCP10Q12799 353 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 MYBPC2Q14324 1141 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 RMND1Q9NWS8 449 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 RWDD2AQ9UIY3 292 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 TTF2Q9UNY4 1162 aaKnown RBP9.83□□□□□ -0.84
LINC00558-201ENST00000569422 AFF2P51816 1311 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 CLCN6P51797 869 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 PPP2R3AQ06190 1150 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 UBE2SQ16763 222 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 C16orf86Q6ZW13 317 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 CHP1Q99653 195 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 ZNF446Q9NWS9 450 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 DDX41Q9UJV9 622 aaKnown RBP9.83□□□□□ -0.84
LINC00558-201ENST00000569422 DAGLAQ9Y4D2 1042 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 ADGRG1Q9Y653 693 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 OR52Z1P0C646 297 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 IDEP14735 1019 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 RBM5P52756 815 aaKnown RBP eCLIP9.83□□□□□ -0.84
LINC00558-201ENST00000569422 KIF4BQ2VIQ3 1234 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 MSL1Q68DK7 614 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 TTBK2Q6IQ55 1244 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 KCTD1Q719H9 257 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 APBB1IPQ7Z5R6 666 aaPredicted RBP9.83□□□□□ -0.84
LINC00558-201ENST00000569422 NEDD1Q8NHV4 660 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 FEZ1Q99689 392 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 ZC3H12CQ9C0D7 883 aaKnown RBP9.83□□□□□ -0.84
LINC00558-201ENST00000569422 SLC39A2Q9NP94 309 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 DDX4Q9NQI0 724 aaKnown RBP9.83□□□□□ -0.84
LINC00558-201ENST00000569422 SH3GLB2Q9NR46 395 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 USP40Q9NVE5 1235 aa9.83□□□□□ -0.84
LINC00558-201ENST00000569422 B4DLN1 442 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 KIF5CO60282 957 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 SSBP05455 408 aaKnown RBP eCLIP9.82□□□□□ -0.84
LINC00558-201ENST00000569422 ZSCAN20P17040 1043 aaPredicted RBP9.82□□□□□ -0.84
LINC00558-201ENST00000569422 GNA11P29992 359 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 KLK7P49862 253 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 NEK8Q86SG6 692 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 REXO1Q8N1G1 1221 aaKnown RBP9.82□□□□□ -0.84
LINC00558-201ENST00000569422 OTUD6BQ8N6M0 293 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 KCNQ5Q9NR82 932 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 MAGEC2Q9UBF1 373 aaPredicted RBP9.82□□□□□ -0.84
LINC00558-201ENST00000569422 POTEMA6NI47 508 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 M0R2N6 131 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 TDP2O95551 362 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 ERVK-24P63145 666 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 STK4Q13043 487 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 STIM1Q13586 685 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 FCHSD1Q86WN1 690 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 CNGA4Q8IV77 575 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 SMAP1Q8IYB5 467 aaPredicted RBP9.82□□□□□ -0.84
LINC00558-201ENST00000569422 CSGALNACT2Q8N6G5 542 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 PANX2Q96RD6 677 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 EXOC1Q9NV70 894 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 TRIM10Q9UDY6 481 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 GUCA1BQ9UMX6 200 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 PCDHAC2Q9Y5I4 1007 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 RPS6KL1Q9Y6S9 549 aa9.82□□□□□ -0.84
LINC00558-201ENST00000569422 PSMA7O14818 248 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 PPEF1O14829 653 aaPredicted RBP9.81□□□□□ -0.84
LINC00558-201ENST00000569422 NKRFO15226 690 aaKnown RBP eCLIP9.81□□□□□ -0.84
LINC00558-201ENST00000569422 SHROOM1Q2M3G4 852 aaPredicted RBP9.81□□□□□ -0.84
LINC00558-201ENST00000569422 ZSCAN29Q8IWY8 852 aaPredicted RBP9.81□□□□□ -0.84
LINC00558-201ENST00000569422 ADSSL1Q8N142 457 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 CDK5RAP3Q96JB5 506 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 PYM1Q9BRP8 204 aaKnown RBP9.81□□□□□ -0.84
LINC00558-201ENST00000569422 ZMYND12Q9H0C1 365 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 DBNDD1Q9H9R9 158 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 ABHD10Q9NUJ1 306 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 SRCAPQ6ZRS2 3230 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 WNK3Q9BYP7 1800 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 TTC26A0AVF1 554 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 GOLGA6L9A6NEM1 432 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 BBOX1O75936 387 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 PDHBP11177 359 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 IL1R1P14778 569 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 PLCG2P16885 1265 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 PBX1P40424 430 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 ARMCX6Q7L4S7 300 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 KRT25Q7Z3Z0 450 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 IRF2BP1Q8IU81 584 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 SLC35F6Q8N357 371 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 ANKS1AQ92625 1134 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 TRAIPQ9BWF2 469 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 SLC37A4O43826 429 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 TADA3O75528 432 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 MTIF2P46199 727 aaKnown RBP9.81□□□□□ -0.84
LINC00558-201ENST00000569422 SNAP25P60880 206 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 RAD51AP2Q09MP3 1159 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 MCM6Q14566 821 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 TMCO3Q6UWJ1 677 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 DNAJC14Q6Y2X3 702 aaPredicted RBP9.81□□□□□ -0.84
LINC00558-201ENST00000569422 ZNF771Q7L3S4 317 aaPredicted RBP9.81□□□□□ -0.84
LINC00558-201ENST00000569422 KIAA0825Q8IV33 1275 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 CERS5Q8N5B7 392 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 LRWD1Q9UFC0 647 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 LIMA1Q9UHB6 759 aaKnown RBP9.81□□□□□ -0.84
LINC00558-201ENST00000569422 LTBP4Q8N2S1 1624 aa9.81□□□□□ -0.84
LINC00558-201ENST00000569422 MYH6P13533 1939 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms