RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 CCDC144BQ3MJ40 725 aa13.32□□□□□ -0.28
CHRFAM7A-206ENST00000569278 TMEM240Q5SV17 173 aa13.32□□□□□ -0.28
CHRFAM7A-206ENST00000569278 ARMCX2Q7L311 632 aa13.32□□□□□ -0.28
CHRFAM7A-206ENST00000569278 KBTBD3Q8NAB2 608 aa13.32□□□□□ -0.28
CHRFAM7A-206ENST00000569278 MKL1Q969V6 931 aa13.32□□□□□ -0.28
CHRFAM7A-206ENST00000569278 PBX4Q9BYU1 374 aa13.32□□□□□ -0.28
CHRFAM7A-206ENST00000569278 GRIN2DO15399 1336 aa13.32□□□□□ -0.28
CHRFAM7A-206ENST00000569278 UMODL1Q5DID0 1318 aa13.32□□□□□ -0.28
CHRFAM7A-206ENST00000569278 GPAA1O43292 621 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 CD4P01730 458 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 CSF2RAP15509 400 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 PLCB2Q00722 1185 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 CNTN2Q02246 1040 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 TMEM63BQ5T3F8 832 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 MFSD5Q6N075 450 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 GIMAP6Q6P9H5 292 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 CPXCR1Q8N123 301 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 FAM133AQ8N9E0 248 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 PRPF38AQ8NAV1 312 aaKnown RBP13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 APPBP2Q92624 585 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 SEC62Q99442 399 aaKnown RBP13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 LRRCC1Q9C099 1032 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 ZNF576Q9H609 170 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 ECHDC1Q9NTX5 307 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 MTMR4Q9NYA4 1195 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 FAM184BQ9ULE4 1060 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 ELP1O95163 1332 aa13.31□□□□□ -0.28
CHRFAM7A-206ENST00000569278 SOWAHBA6NEL2 793 aa13.3□□□□□ -0.28
CHRFAM7A-206ENST00000569278 C6orf222P0C671 652 aaPredicted RBP13.3□□□□□ -0.28
CHRFAM7A-206ENST00000569278 ADGRE1Q14246 886 aa13.3□□□□□ -0.28
CHRFAM7A-206ENST00000569278 AMOTL1Q8IY63 956 aa13.3□□□□□ -0.28
CHRFAM7A-206ENST00000569278 CCDC144CPQ8IYA2 1237 aa13.3□□□□□ -0.28
CHRFAM7A-206ENST00000569278 SLC43A3Q8NBI5 491 aa13.3□□□□□ -0.28
CHRFAM7A-206ENST00000569278 GMCL1P1Q8NEA9 526 aa13.3□□□□□ -0.28
CHRFAM7A-206ENST00000569278 NUP133Q8WUM0 1156 aa13.3□□□□□ -0.28
CHRFAM7A-206ENST00000569278 KIFC2Q96AC6 838 aa13.3□□□□□ -0.28
CHRFAM7A-206ENST00000569278 TIFAQ96CG3 184 aa13.3□□□□□ -0.28
CHRFAM7A-206ENST00000569278 BACH2Q9BYV9 841 aa13.3□□□□□ -0.28
CHRFAM7A-206ENST00000569278 A1CFQ9NQ94 594 aaKnown RBP13.3□□□□□ -0.28
CHRFAM7A-206ENST00000569278 CXXC1Q9P0U4 656 aaPredicted RBP13.3□□□□□ -0.28
CHRFAM7A-206ENST00000569278 CLIP2Q9UDT6 1046 aa13.3□□□□□ -0.28
CHRFAM7A-206ENST00000569278 GNEQ9Y223 722 aaKnown RBP13.3□□□□□ -0.28
CHRFAM7A-206ENST00000569278 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.29□□□□□ -0.28
CHRFAM7A-206ENST00000569278 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.29□□□□□ -0.28
CHRFAM7A-206ENST00000569278 DCDC2CA8MYV0 355 aa13.29□□□□□ -0.28
CHRFAM7A-206ENST00000569278 MINDY4BA8MYZ0 360 aa13.29□□□□□ -0.28
CHRFAM7A-206ENST00000569278 ARVCFO00192 962 aa13.29□□□□□ -0.28
CHRFAM7A-206ENST00000569278 ACRP10323 421 aa13.29□□□□□ -0.28
CHRFAM7A-206ENST00000569278 PDE4AP27815 886 aa13.29□□□□□ -0.28
CHRFAM7A-206ENST00000569278 BEX3Q00994 111 aa13.29□□□□□ -0.28
CHRFAM7A-206ENST00000569278 OTUD7AQ8TE49 926 aaPredicted RBP13.29□□□□□ -0.28
CHRFAM7A-206ENST00000569278 PPP1R12CQ9BZL4 782 aa13.29□□□□□ -0.28
CHRFAM7A-206ENST00000569278 ABHD16BQ9H3Z7 469 aa13.29□□□□□ -0.28
CHRFAM7A-206ENST00000569278 A0A0U1RQG5 324 aaPredicted RBP13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 RNF113AO15541 343 aaKnown RBP13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 IGHDP01880 384 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 CYP2C18P33260 490 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 OAZ1P54368 228 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 ZSCAN25Q6NSZ9 544 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 MAMSTRQ6ZN01 415 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 ZNF365Q70YC5 407 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 SMC5Q8IY18 1101 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 CHST13Q8NET6 341 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 PI4K2BQ8TCG2 481 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 DDX11Q96FC9 970 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 DDRGK1Q96HY6 314 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 AGBL1Q96MI9 1066 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 GLT1D1Q96MS3 346 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 PURBQ96QR8 312 aaKnown RBP13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 WNT8AQ9H1J5 351 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 MKNK2Q9HBH9 465 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 HOMER2Q9NSB8 354 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 FEM1BQ9UK73 627 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 SYNPO2Q9UMS6 1093 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 YBX2Q9Y2T7 364 aaKnown RBP13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 PCDHB15Q9Y5E8 787 aa13.28□□□□□ -0.28
CHRFAM7A-206ENST00000569278 TANC1Q9C0D5 1861 aa13.27□□□□□ -0.28
CHRFAM7A-206ENST00000569278 SCN5AQ14524 2016 aa13.27□□□□□ -0.28
CHRFAM7A-206ENST00000569278 MYO9BQ13459 2157 aa13.27□□□□□ -0.28
CHRFAM7A-206ENST00000569278 TTLL1O95922 423 aa13.27□□□□□ -0.29
CHRFAM7A-206ENST00000569278 SLC4A3P48751 1232 aa13.27□□□□□ -0.29
CHRFAM7A-206ENST00000569278 SNAP25P60880 206 aa13.27□□□□□ -0.29
CHRFAM7A-206ENST00000569278 MUM1L1Q5H9M0 696 aa13.27□□□□□ -0.29
CHRFAM7A-206ENST00000569278 SLFN13Q68D06 897 aa13.27□□□□□ -0.29
CHRFAM7A-206ENST00000569278 IFNL3Q8IZI9 196 aa13.27□□□□□ -0.29
CHRFAM7A-206ENST00000569278 NEDD1Q8NHV4 660 aa13.27□□□□□ -0.29
CHRFAM7A-206ENST00000569278 PRDM12Q9H4Q4 367 aa13.27□□□□□ -0.29
CHRFAM7A-206ENST00000569278 SCUBE2Q9NQ36 999 aa13.27□□□□□ -0.29
CHRFAM7A-206ENST00000569278 PDGFCQ9NRA1 345 aa13.27□□□□□ -0.29
CHRFAM7A-206ENST00000569278 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.27□□□□□ -0.29
CHRFAM7A-206ENST00000569278 BDP1A6H8Y1 2624 aa13.27□□□□□ -0.29
CHRFAM7A-206ENST00000569278 MROH7Q68CQ1 1323 aa13.27□□□□□ -0.29
CHRFAM7A-206ENST00000569278 PTPRSQ13332 1948 aa13.27□□□□□ -0.29
CHRFAM7A-206ENST00000569278 RBAK-RBAKDNI3L0D1 243 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 NMT2O60551 498 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 ZBED4O75132 1171 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 BMP3P12645 472 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 SMPD1P17405 629 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 NOVP48745 357 aa13.26□□□□□ -0.29
CHRFAM7A-206ENST00000569278 TDO2P48775 406 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms