RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	HS3ST3A1	Q9Y663	406 aa		6.14	□□□□□ -1.43
UBR1-209	ENST00000569243	PLAT	P00750	562 aa		6.13	□□□□□ -1.43
UBR1-209	ENST00000569243	SYP	P08247	313 aa		6.13	□□□□□ -1.43
UBR1-209	ENST00000569243	ATF2	P15336	505 aa		6.13	□□□□□ -1.43
UBR1-209	ENST00000569243	MAPKAPK2	P49137	400 aa		6.13	□□□□□ -1.43
UBR1-209	ENST00000569243	HTRA3	P83110	453 aa		6.13	□□□□□ -1.43
UBR1-209	ENST00000569243	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	6.13	□□□□□ -1.43
UBR1-209	ENST00000569243	COPRS	Q9NQ92	184 aa		6.13	□□□□□ -1.43
UBR1-209	ENST00000569243	PRR13	Q9NZ81	148 aa		6.13	□□□□□ -1.43
UBR1-209	ENST00000569243	ING1	Q9UK53	422 aa	Predicted RBP	6.13	□□□□□ -1.43
UBR1-209	ENST00000569243	ZNF165	P49910	485 aa		6.12	□□□□□ -1.43
UBR1-209	ENST00000569243	BBS9	Q3SYG4	887 aa		6.12	□□□□□ -1.43
UBR1-209	ENST00000569243	SLITRK4	Q8IW52	837 aa		6.12	□□□□□ -1.43
UBR1-209	ENST00000569243	KISS1R	Q969F8	398 aa	Predicted RBP	6.12	□□□□□ -1.43
UBR1-209	ENST00000569243	NT5C1A	Q9BXI3	368 aa		6.12	□□□□□ -1.43
UBR1-209	ENST00000569243	BCL2L13	Q9BXK5	485 aa		6.12	□□□□□ -1.43
UBR1-209	ENST00000569243	GZF1	Q9H116	711 aa	Predicted RBP	6.12	□□□□□ -1.43
UBR1-209	ENST00000569243	GGT7	Q9UJ14	662 aa		6.12	□□□□□ -1.43
UBR1-209	ENST00000569243	PLA2G2D	Q9UNK4	145 aa		6.12	□□□□□ -1.43
UBR1-209	ENST00000569243	MEIS3P2	A8K0S8	358 aa		6.11	□□□□□ -1.43
UBR1-209	ENST00000569243	TLR3	O15455	904 aa	Known RBP	6.11	□□□□□ -1.43
UBR1-209	ENST00000569243	AMH	P03971	560 aa		6.11	□□□□□ -1.43
UBR1-209	ENST00000569243	CDSN	Q15517	529 aa		6.11	□□□□□ -1.43
UBR1-209	ENST00000569243	INTS3	Q68E01	1043 aa	Known RBP	6.11	□□□□□ -1.43
UBR1-209	ENST00000569243	NLRC3	Q7RTR2	1065 aa		6.11	□□□□□ -1.43
UBR1-209	ENST00000569243	ATG4C	Q96DT6	458 aa		6.11	□□□□□ -1.43
UBR1-209	ENST00000569243	FCRL2	Q96LA5	508 aa	Predicted RBP	6.11	□□□□□ -1.43
UBR1-209	ENST00000569243	ADAMTS1	Q9UHI8	967 aa		6.11	□□□□□ -1.43
UBR1-209	ENST00000569243	FAN1	Q9Y2M0	1017 aa		6.11	□□□□□ -1.43
UBR1-209	ENST00000569243	TSC22D4	Q9Y3Q8	395 aa		6.11	□□□□□ -1.43
UBR1-209	ENST00000569243	TNFRSF10C	O14798	259 aa		6.1	□□□□□ -1.43
UBR1-209	ENST00000569243	SIGLEC6	O43699	453 aa		6.1	□□□□□ -1.43
UBR1-209	ENST00000569243	CLEC3A	O75596	197 aa		6.1	□□□□□ -1.43
UBR1-209	ENST00000569243	CRK	P46108	304 aa		6.1	□□□□□ -1.43
UBR1-209	ENST00000569243	NR1I3	Q14994	352 aa		6.1	□□□□□ -1.43
UBR1-209	ENST00000569243	OVOS1	Q6IE37	1185 aa		6.1	□□□□□ -1.43
UBR1-209	ENST00000569243	C11orf21	Q9P2W6	132 aa		6.1	□□□□□ -1.43
UBR1-209	ENST00000569243	ACSL6	Q9UKU0	697 aa		6.1	□□□□□ -1.43
UBR1-209	ENST00000569243	HCFC2	Q9Y5Z7	792 aa		6.1	□□□□□ -1.43
UBR1-209	ENST00000569243	NME1	P15531	152 aa	Known RBP	6.09	□□□□□ -1.43
UBR1-209	ENST00000569243	APOBR	Q0VD83	1088 aa		6.09	□□□□□ -1.43
UBR1-209	ENST00000569243	DHRS1	Q96LJ7	313 aa		6.09	□□□□□ -1.43
UBR1-209	ENST00000569243	IMPDH2	P12268	514 aa		6.08	□□□□□ -1.44
UBR1-209	ENST00000569243	SEZ6	Q53EL9	994 aa		6.08	□□□□□ -1.44
UBR1-209	ENST00000569243	TMC3	Q7Z5M5	1100 aa		6.08	□□□□□ -1.44
UBR1-209	ENST00000569243	SLCO6A1	Q86UG4	719 aa		6.08	□□□□□ -1.44
UBR1-209	ENST00000569243	ZNF761	Q86XN6	746 aa	Predicted RBP	6.08	□□□□□ -1.44
UBR1-209	ENST00000569243	GIPC2	Q8TF65	315 aa		6.08	□□□□□ -1.44
UBR1-209	ENST00000569243	UBP1	Q9NZI7	540 aa		6.08	□□□□□ -1.44
UBR1-209	ENST00000569243	IMPACT	Q9P2X3	320 aa		6.08	□□□□□ -1.44
UBR1-209	ENST00000569243	MC3R	P41968	323 aa		6.07	□□□□□ -1.44
UBR1-209	ENST00000569243	SARS	P49591	514 aa	Known RBP	6.07	□□□□□ -1.44
UBR1-209	ENST00000569243	CLC	Q05315	142 aa		6.07	□□□□□ -1.44
UBR1-209	ENST00000569243	TAB3	Q8N5C8	712 aa	Predicted RBP	6.07	□□□□□ -1.44
UBR1-209	ENST00000569243	NKD1	Q969G9	470 aa		6.07	□□□□□ -1.44
UBR1-209	ENST00000569243	EAF1	Q96JC9	268 aa	Predicted RBP	6.07	□□□□□ -1.44
UBR1-209	ENST00000569243	PRAMEF1	O95521	474 aa		6.06	□□□□□ -1.44
UBR1-209	ENST00000569243	BMP8B	P34820	402 aa		6.06	□□□□□ -1.44
UBR1-209	ENST00000569243	GK5	Q6ZS86	529 aa		6.06	□□□□□ -1.44
UBR1-209	ENST00000569243	LIMS2	Q7Z4I7	341 aa		6.06	□□□□□ -1.44
UBR1-209	ENST00000569243	ZNF575	Q86XF7	245 aa		6.06	□□□□□ -1.44
UBR1-209	ENST00000569243	SSBP3	Q9BWW4	388 aa	Predicted RBP	6.06	□□□□□ -1.44
UBR1-209	ENST00000569243	CHST7	Q9NS84	486 aa		6.06	□□□□□ -1.44
UBR1-209	ENST00000569243	ZNF536	O15090	1300 aa		6.05	□□□□□ -1.44
UBR1-209	ENST00000569243		A0A1W2PQ45	241 aa	Predicted RBP	6.05	□□□□□ -1.44
UBR1-209	ENST00000569243		A0A1W2PQY0	241 aa		6.05	□□□□□ -1.44
UBR1-209	ENST00000569243	POLR2B	P30876	1174 aa	Known RBP	6.05	□□□□□ -1.44
UBR1-209	ENST00000569243	SNW1	Q13573	536 aa	Known RBP	6.05	□□□□□ -1.44
UBR1-209	ENST00000569243	AUH	Q13825	339 aa	Known RBP	6.05	□□□□□ -1.44
UBR1-209	ENST00000569243	GLB1L	Q6UWU2	654 aa		6.05	□□□□□ -1.44
UBR1-209	ENST00000569243	KIAA0825	Q8IV33	1275 aa		6.05	□□□□□ -1.44
UBR1-209	ENST00000569243	TMEM192	Q8IY95	271 aa		6.05	□□□□□ -1.44
UBR1-209	ENST00000569243	METTL5	Q9NRN9	209 aa	Known RBP	6.05	□□□□□ -1.44
UBR1-209	ENST00000569243	ERVK13-1	Q9NX77	482 aa		6.05	□□□□□ -1.44
UBR1-209	ENST00000569243	PCDHB12	Q9Y5F1	795 aa		6.05	□□□□□ -1.44
UBR1-209	ENST00000569243	ZNF205	O95201	554 aa		6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	MCM4	P33991	863 aa		6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	CEBPA	P49715	358 aa	Predicted RBP	6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	HNRNPA0	Q13151	305 aa	Known RBP	6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	SMN1	Q16637	294 aa	Known RBP	6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	ANKRD39	Q53RE8	183 aa		6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	LDLRAD1	Q5T700	205 aa		6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	SMARCC1	Q92922	1105 aa	Predicted RBP	6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	SLC6A18	Q96N87	628 aa		6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	JMJD8	Q96S16	334 aa		6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	SPON2	Q9BUD6	331 aa		6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	RNF38	Q9H0F5	515 aa		6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	NTM	Q9P121	344 aa		6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	SUCO	Q9UBS9	1254 aa	Known RBP	6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	ZNRF3	Q9ULT6	936 aa		6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	INVS	Q9Y283	1065 aa		6.04	□□□□□ -1.44
UBR1-209	ENST00000569243	GSN	P06396	782 aa		6.03	□□□□□ -1.44
UBR1-209	ENST00000569243	VAV1	P15498	845 aa		6.03	□□□□□ -1.44
UBR1-209	ENST00000569243	PAQR3	Q6TCH7	311 aa		6.03	□□□□□ -1.44
UBR1-209	ENST00000569243	RBBP8NL	Q8NC74	664 aa	Predicted RBP	6.03	□□□□□ -1.44
UBR1-209	ENST00000569243	SLC9A7	Q96T83	725 aa		6.03	□□□□□ -1.44
UBR1-209	ENST00000569243	TM9SF2	Q99805	663 aa		6.03	□□□□□ -1.44
UBR1-209	ENST00000569243	CDADC1	Q9BWV3	514 aa		6.03	□□□□□ -1.44
UBR1-209	ENST00000569243	MKRN2	Q9H000	416 aa	Known RBP	6.03	□□□□□ -1.44
UBR1-209	ENST00000569243	MINPP1	Q9UNW1	487 aa		6.03	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms