RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 PCP11498 1178 aaKnown RBP10.89□□□□□ -0.67
CAPN3-219ENST00000569136 ICA1Q05084 483 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 NMIQ13287 307 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-219ENST00000569136 COG2Q14746 738 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 SHROOM1Q2M3G4 852 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-219ENST00000569136 TTC22Q5TAA0 569 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 RNF20Q5VTR2 975 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 CATSPERGQ6ZRH7 1159 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 RNF135Q8IUD6 432 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 SIAH1Q8IUQ4 282 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 CCDC116Q8IYX3 515 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 GPRC5AQ8NFJ5 357 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 HPS1Q92902 700 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 ALG2Q9H553 416 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 EPB41L4AQ9HCS5 686 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-219ENST00000569136 NYAP2Q9P242 653 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 CTNNA3Q9UI47 895 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 SYNPO2Q9UMS6 1093 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 RABGAP1Q9Y3P9 1069 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 AK9Q5TCS8 1911 aa10.89□□□□□ -0.67
CAPN3-219ENST00000569136 CCDC171Q6TFL3 1326 aa10.88□□□□□ -0.67
CAPN3-219ENST00000569136 A0A0D9SFI3 127 aa10.88□□□□□ -0.67
CAPN3-219ENST00000569136 NR3C2P08235 984 aa10.88□□□□□ -0.67
CAPN3-219ENST00000569136 FGRP09769 529 aa10.88□□□□□ -0.67
CAPN3-219ENST00000569136 RASA1P20936 1047 aa10.88□□□□□ -0.67
CAPN3-219ENST00000569136 HERVK_113P62684 666 aa10.88□□□□□ -0.67
CAPN3-219ENST00000569136 CCNA1P78396 465 aa10.88□□□□□ -0.67
CAPN3-219ENST00000569136 DHX9Q08211 1270 aaKnown RBP10.88□□□□□ -0.67
CAPN3-219ENST00000569136 CWC27Q6UX04 472 aaKnown RBP10.88□□□□□ -0.67
CAPN3-219ENST00000569136 CCDC129Q6ZRS4 1044 aa10.88□□□□□ -0.67
CAPN3-219ENST00000569136 ANKRD13CQ8N6S4 541 aa10.88□□□□□ -0.67
CAPN3-219ENST00000569136 NEDD1Q8NHV4 660 aa10.88□□□□□ -0.67
CAPN3-219ENST00000569136 ADAMTS19Q8TE59 1207 aa10.88□□□□□ -0.67
CAPN3-219ENST00000569136 MKL1Q969V6 931 aa10.88□□□□□ -0.67
CAPN3-219ENST00000569136 COA7Q96BR5 231 aa10.88□□□□□ -0.67
CAPN3-219ENST00000569136 MORF4L1Q9UBU8 362 aa10.88□□□□□ -0.67
CAPN3-219ENST00000569136 A0A1W2PRG0 241 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 TSPY3P0CV98 308 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 TSPY8P0CW00 308 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 EEF2P13639 858 aaKnown RBP10.87□□□□□ -0.67
CAPN3-219ENST00000569136 VCAM1P19320 739 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 TFAP4Q01664 338 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 ATP2B2Q01814 1243 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 VPS53Q5VIR6 699 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 LBX2Q6XYB7 198 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 CCAR1Q8IX12 1150 aaKnown RBP10.87□□□□□ -0.67
CAPN3-219ENST00000569136 MB21D1Q8N884 522 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 CCDC136Q96JN2 1154 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 TRIM47Q96LD4 638 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 DSCC1Q9BVC3 393 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 RNF41Q9H4P4 317 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-219ENST00000569136 VCPKMTQ9H867 229 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 MTMR4Q9NYA4 1195 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 RBPJLQ9UBG7 517 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 SRRDQ9UH36 339 aa10.87□□□□□ -0.67
CAPN3-219ENST00000569136 ZMYM6O95789 1325 aa10.86□□□□□ -0.67
CAPN3-219ENST00000569136 SMIM22K7EJ46 135 aa10.86□□□□□ -0.67
CAPN3-219ENST00000569136 ZNF213O14771 459 aa10.86□□□□□ -0.67
CAPN3-219ENST00000569136 WDR46O15213 610 aaKnown RBP10.86□□□□□ -0.67
CAPN3-219ENST00000569136 ORC4O43929 436 aa10.86□□□□□ -0.67
CAPN3-219ENST00000569136 DGAT1O75907 488 aa10.86□□□□□ -0.67
CAPN3-219ENST00000569136 TTLL1O95922 423 aa10.86□□□□□ -0.67
CAPN3-219ENST00000569136 MAPK4P31152 587 aa10.86□□□□□ -0.67
CAPN3-219ENST00000569136 WDR4P57081 412 aaKnown RBP10.86□□□□□ -0.67
CAPN3-219ENST00000569136 ZYXQ15942 572 aaKnown RBP10.86□□□□□ -0.67
CAPN3-219ENST00000569136 RPAP3Q9H6T3 665 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-219ENST00000569136 CLIP2Q9UDT6 1046 aa10.86□□□□□ -0.67
CAPN3-219ENST00000569136 PCDHB11Q9Y5F2 797 aa10.86□□□□□ -0.67
CAPN3-219ENST00000569136 ROBO3Q96MS0 1386 aa10.86□□□□□ -0.67
CAPN3-219ENST00000569136 IGKV6D-41A0A0C4DH26 115 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 ESPNB1AK53 854 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 ERVH48-1M5A8F1 160 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 TNPO2O14787 897 aaKnown RBP10.85□□□□□ -0.67
CAPN3-219ENST00000569136 FOXP2O15409 715 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 PRDM1O75626 825 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 CHMLP26374 656 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 CCDC178Q5BJE1 867 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 PPP1R26Q5T8A7 1209 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-219ENST00000569136 Q6ZNB5 142 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 MFSD6Q6ZSS7 791 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 ZNF589Q86UQ0 364 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-219ENST00000569136 STK11IPQ8N1F8 1099 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 RAET1EQ8TD07 263 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 ARMC5Q96C12 935 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 TTC14Q96N46 770 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 ARHGAP39Q9C0H5 1083 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 TMPRSS4Q9NRS4 437 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 TCP11L1Q9NUJ3 509 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 PGPEP1Q9NXJ5 209 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 CASP8AP2Q9UKL3 1982 aa10.85□□□□□ -0.67
CAPN3-219ENST00000569136 MYPNQ86TC9 1320 aa10.84□□□□□ -0.67
CAPN3-219ENST00000569136 RAD50Q92878 1312 aa10.84□□□□□ -0.67
CAPN3-219ENST00000569136 TSPY2A6NKD2 308 aa10.84□□□□□ -0.67
CAPN3-219ENST00000569136 F5H6K3 240 aa10.84□□□□□ -0.67
CAPN3-219ENST00000569136 PIK3CDO00329 1044 aa10.84□□□□□ -0.67
CAPN3-219ENST00000569136 RANBP6O60518 1105 aaKnown RBP10.84□□□□□ -0.67
CAPN3-219ENST00000569136 ZIC2O95409 532 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-219ENST00000569136 SKIP12755 728 aa10.84□□□□□ -0.67
CAPN3-219ENST00000569136 GSPT1P15170 499 aaKnown RBP10.84□□□□□ -0.67
CAPN3-219ENST00000569136 CAPN2P17655 700 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms