RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 IBSPP21815 317 aaPredicted RBP10.05□□□□□ -0.8
CDH11-216ENST00000569128 RPL6Q02878 288 aaKnown RBP10.05□□□□□ -0.8
CDH11-216ENST00000569128 INPP5AQ14642 412 aa10.05□□□□□ -0.8
CDH11-216ENST00000569128 KIF4BQ2VIQ3 1234 aa10.05□□□□□ -0.8
CDH11-216ENST00000569128 TWISTNBQ3B726 338 aaPredicted RBP10.05□□□□□ -0.8
CDH11-216ENST00000569128 NOL8Q76FK4 1167 aaKnown RBP10.05□□□□□ -0.8
CDH11-216ENST00000569128 LRRC3Q9BY71 257 aa10.05□□□□□ -0.8
CDH11-216ENST00000569128 TMPRSS13Q9BYE2 586 aa10.05□□□□□ -0.8
CDH11-216ENST00000569128 MRPL42Q9Y6G3 142 aaKnown RBP10.05□□□□□ -0.8
CDH11-216ENST00000569128 DCDC2CA8MYV0 355 aa10.04□□□□□ -0.8
CDH11-216ENST00000569128 BCAR3O75815 825 aa10.04□□□□□ -0.8
CDH11-216ENST00000569128 SLFN14P0C7P3 912 aa10.04□□□□□ -0.8
CDH11-216ENST00000569128 SERINC3Q13530 473 aa10.04□□□□□ -0.8
CDH11-216ENST00000569128 CWF19L2Q2TBE0 894 aaKnown RBP10.04□□□□□ -0.8
CDH11-216ENST00000569128 WIPI1Q5MNZ9 446 aaPredicted RBP10.04□□□□□ -0.8
CDH11-216ENST00000569128 LRFN4Q6PJG9 635 aa10.04□□□□□ -0.8
CDH11-216ENST00000569128 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.04□□□□□ -0.8
CDH11-216ENST00000569128 REC114Q7Z4M0 266 aa10.04□□□□□ -0.8
CDH11-216ENST00000569128 SLITRK4Q8IW52 837 aa10.04□□□□□ -0.8
CDH11-216ENST00000569128 AGGF1Q8N302 714 aaeCLIP10.04□□□□□ -0.8
CDH11-216ENST00000569128 MKL1Q969V6 931 aa10.04□□□□□ -0.8
CDH11-216ENST00000569128 PLPPR2Q96GM1 343 aa10.04□□□□□ -0.8
CDH11-216ENST00000569128 SEC16BQ96JE7 1060 aa10.04□□□□□ -0.8
CDH11-216ENST00000569128 RNF208Q9H0X6 261 aa10.04□□□□□ -0.8
CDH11-216ENST00000569128 RCAN3Q9UKA8 241 aa10.04□□□□□ -0.8
CDH11-216ENST00000569128 CSADQ9Y600 493 aa10.04□□□□□ -0.8
CDH11-216ENST00000569128 HEG1Q9ULI3 1381 aa10.03□□□□□ -0.8
CDH11-216ENST00000569128 ALX3O95076 343 aa10.03□□□□□ -0.8
CDH11-216ENST00000569128 EIF2S2P20042 333 aaKnown RBP10.03□□□□□ -0.8
CDH11-216ENST00000569128 MCM4P33991 863 aa10.03□□□□□ -0.8
CDH11-216ENST00000569128 NASPP49321 788 aaPredicted RBP10.03□□□□□ -0.8
CDH11-216ENST00000569128 RARSP54136 660 aaKnown RBP10.03□□□□□ -0.8
CDH11-216ENST00000569128 RNF187Q5TA31 235 aaPredicted RBP10.03□□□□□ -0.8
CDH11-216ENST00000569128 TTC5Q8N0Z6 440 aa10.03□□□□□ -0.8
CDH11-216ENST00000569128 SSH1Q8WYL5 1049 aa10.03□□□□□ -0.8
CDH11-216ENST00000569128 ELMO3Q96BJ8 720 aa10.03□□□□□ -0.8
CDH11-216ENST00000569128 METTL14Q9HCE5 456 aaKnown RBP10.03□□□□□ -0.8
CDH11-216ENST00000569128 USP16Q9Y5T5 823 aa10.03□□□□□ -0.8
CDH11-216ENST00000569128 SBF2Q86WG5 1849 aa10.03□□□□□ -0.8
CDH11-216ENST00000569128 KCPQ6ZWJ8 1503 aa10.02□□□□□ -0.8
CDH11-216ENST00000569128 MEGF11A6BM72 1044 aa10.02□□□□□ -0.81
CDH11-216ENST00000569128 ENPP3O14638 875 aa10.02□□□□□ -0.81
CDH11-216ENST00000569128 PLIN1O60240 522 aa10.02□□□□□ -0.81
CDH11-216ENST00000569128 C12orf40Q86WS4 652 aa10.02□□□□□ -0.81
CDH11-216ENST00000569128 FMNL2Q96PY5 1086 aa10.02□□□□□ -0.81
CDH11-216ENST00000569128 BRMS1Q9HCU9 246 aa10.02□□□□□ -0.81
CDH11-216ENST00000569128 PPP1R9AQ9ULJ8 1098 aa10.02□□□□□ -0.81
CDH11-216ENST00000569128 PCDHGC5Q9Y5F6 944 aa10.02□□□□□ -0.81
CDH11-216ENST00000569128 PAPPAQ13219 1627 aa10.02□□□□□ -0.81
CDH11-216ENST00000569128 F8W735 103 aaPredicted RBP10.01□□□□□ -0.81
CDH11-216ENST00000569128 GFRA2O00451 464 aa10.01□□□□□ -0.81
CDH11-216ENST00000569128 GRIN3BO60391 1043 aa10.01□□□□□ -0.81
CDH11-216ENST00000569128 ANXA1P04083 346 aa10.01□□□□□ -0.81
CDH11-216ENST00000569128 PIP4K2AP48426 406 aaPredicted RBP10.01□□□□□ -0.81
CDH11-216ENST00000569128 ZC3H12AQ5D1E8 599 aaKnown RBP10.01□□□□□ -0.81
CDH11-216ENST00000569128 HDXQ7Z353 690 aa10.01□□□□□ -0.81
CDH11-216ENST00000569128 DNAJC10Q8IXB1 793 aa10.01□□□□□ -0.81
CDH11-216ENST00000569128 LENG1Q96BZ8 264 aaPredicted RBP10.01□□□□□ -0.81
CDH11-216ENST00000569128 CYP4F12Q9HCS2 524 aa10.01□□□□□ -0.81
CDH11-216ENST00000569128 TNNQ9UQP3 1299 aa10.01□□□□□ -0.81
CDH11-216ENST00000569128 NOP58Q9Y2X3 529 aaKnown RBP10.01□□□□□ -0.81
CDH11-216ENST00000569128 C5P01031 1676 aa10□□□□□ -0.81
CDH11-216ENST00000569128 NHSQ6T4R5 1651 aa10□□□□□ -0.81
CDH11-216ENST00000569128 APBA3O96018 575 aa10□□□□□ -0.81
CDH11-216ENST00000569128 SSBP05455 408 aaKnown RBP eCLIP10□□□□□ -0.81
CDH11-216ENST00000569128 SNRPA1P09661 255 aaKnown RBP10□□□□□ -0.81
CDH11-216ENST00000569128 DRD2P14416 443 aa10□□□□□ -0.81
CDH11-216ENST00000569128 ID3Q02535 119 aa10□□□□□ -0.81
CDH11-216ENST00000569128 G2E3Q7L622 706 aa10□□□□□ -0.81
CDH11-216ENST00000569128 TMEM130Q8N3G9 435 aa10□□□□□ -0.81
CDH11-216ENST00000569128 SMG8Q8ND04 991 aaKnown RBP10□□□□□ -0.81
CDH11-216ENST00000569128 AKTIPQ9H8T0 292 aa10□□□□□ -0.81
CDH11-216ENST00000569128 AP4E1Q9UPM8 1137 aa10□□□□□ -0.81
CDH11-216ENST00000569128 POLR3KQ9Y2Y1 108 aaPredicted RBP10□□□□□ -0.81
CDH11-216ENST00000569128 SNCAIPQ9Y6H5 919 aa10□□□□□ -0.81
CDH11-216ENST00000569128 BTAF1O14981 1849 aa10□□□□□ -0.81
CDH11-216ENST00000569128 PALLDQ8WX93 1383 aa10□□□□□ -0.81
CDH11-216ENST00000569128 UBR2Q8IWV8 1755 aa9.99□□□□□ -0.81
CDH11-216ENST00000569128 TMPRSS2O15393 492 aa9.99□□□□□ -0.81
CDH11-216ENST00000569128 A1BGP04217 495 aa9.99□□□□□ -0.81
CDH11-216ENST00000569128 CT47B1P0C2W7 299 aaPredicted RBP9.99□□□□□ -0.81
CDH11-216ENST00000569128 ADH5P11766 374 aa9.99□□□□□ -0.81
CDH11-216ENST00000569128 SOX9P48436 509 aa9.99□□□□□ -0.81
CDH11-216ENST00000569128 ANAPC15P60006 121 aa9.99□□□□□ -0.81
CDH11-216ENST00000569128 IRX6P78412 446 aaPredicted RBP9.99□□□□□ -0.81
CDH11-216ENST00000569128 ITPK1Q13572 414 aa9.99□□□□□ -0.81
CDH11-216ENST00000569128 COL9A2Q14055 689 aaPredicted RBP9.99□□□□□ -0.81
CDH11-216ENST00000569128 PROSER3Q2NL68 480 aa9.99□□□□□ -0.81
CDH11-216ENST00000569128 FDX2Q6P4F2 183 aa9.99□□□□□ -0.81
CDH11-216ENST00000569128 GK5Q6ZS86 529 aa9.99□□□□□ -0.81
CDH11-216ENST00000569128 C12orf50Q8NA57 414 aaPredicted RBP9.99□□□□□ -0.81
CDH11-216ENST00000569128 SUGCTQ9HAC7 445 aa9.99□□□□□ -0.81
CDH11-216ENST00000569128 SMC4Q9NTJ3 1288 aa9.99□□□□□ -0.81
CDH11-216ENST00000569128 PPT2Q9UMR5 302 aa9.99□□□□□ -0.81
CDH11-216ENST00000569128 SYNGAP1Q96PV0 1343 aa9.99□□□□□ -0.81
CDH11-216ENST00000569128 PRAMEF27A3QJZ7 478 aa9.98□□□□□ -0.81
CDH11-216ENST00000569128 FAM181BA6NEQ2 426 aa9.98□□□□□ -0.81
CDH11-216ENST00000569128 ZNF165P49910 485 aa9.98□□□□□ -0.81
CDH11-216ENST00000569128 CLCQ05315 142 aa9.98□□□□□ -0.81
CDH11-216ENST00000569128 PPM1JQ5JR12 505 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms