RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 CCPG1Q9ULG6 757 aa16.13■□□□□ 0.17
CNOT1-215ENST00000569020 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.12■□□□□ 0.17
CNOT1-215ENST00000569020 ARVCFO00192 962 aa16.12■□□□□ 0.17
CNOT1-215ENST00000569020 FGAP02671 866 aa16.12■□□□□ 0.17
CNOT1-215ENST00000569020 ICAM1P05362 532 aa16.12■□□□□ 0.17
CNOT1-215ENST00000569020 NOVP48745 357 aa16.12■□□□□ 0.17
CNOT1-215ENST00000569020 CDK7P50613 346 aa16.12■□□□□ 0.17
CNOT1-215ENST00000569020 EPHB4P54760 987 aa16.12■□□□□ 0.17
CNOT1-215ENST00000569020 NKX3-2P78367 333 aa16.12■□□□□ 0.17
CNOT1-215ENST00000569020 MUM1L1Q5H9M0 696 aa16.12■□□□□ 0.17
CNOT1-215ENST00000569020 RASGRP2Q7LDG7 609 aa16.12■□□□□ 0.17
CNOT1-215ENST00000569020 FAM227BQ96M60 508 aa16.12■□□□□ 0.17
CNOT1-215ENST00000569020 CYP39A1Q9NYL5 469 aa16.12■□□□□ 0.17
CNOT1-215ENST00000569020 TBX21Q9UL17 535 aa16.12■□□□□ 0.17
CNOT1-215ENST00000569020 TMEM265A0A087WTH1 108 aa16.11■□□□□ 0.17
CNOT1-215ENST00000569020 A0A0D9SFI3 127 aa16.11■□□□□ 0.17
CNOT1-215ENST00000569020 TRIM6-TRIM34B2RNG4 842 aa16.11■□□□□ 0.17
CNOT1-215ENST00000569020 HSPD1P10809 573 aaKnown RBP16.11■□□□□ 0.17
CNOT1-215ENST00000569020 TOP1P11387 765 aaKnown RBP16.11■□□□□ 0.17
CNOT1-215ENST00000569020 BEX3Q00994 111 aa16.11■□□□□ 0.17
CNOT1-215ENST00000569020 MFSD5Q6N075 450 aa16.11■□□□□ 0.17
CNOT1-215ENST00000569020 NSMFQ6X4W1 530 aa16.11■□□□□ 0.17
CNOT1-215ENST00000569020 TLK2Q86UE8 772 aa16.11■□□□□ 0.17
CNOT1-215ENST00000569020 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.11■□□□□ 0.17
CNOT1-215ENST00000569020 AP5M1Q9H0R1 490 aa16.11■□□□□ 0.17
CNOT1-215ENST00000569020 RANBP17Q9H2T7 1088 aaKnown RBP16.11■□□□□ 0.17
CNOT1-215ENST00000569020 TCP11L1Q9NUJ3 509 aa16.11■□□□□ 0.17
CNOT1-215ENST00000569020 GNEQ9Y223 722 aaKnown RBP16.11■□□□□ 0.17
CNOT1-215ENST00000569020 ZMYM6O95789 1325 aa16.11■□□□□ 0.17
CNOT1-215ENST00000569020 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.1■□□□□ 0.17
CNOT1-215ENST00000569020 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.1■□□□□ 0.17
CNOT1-215ENST00000569020 CTAGE5O15320 804 aa16.1■□□□□ 0.17
CNOT1-215ENST00000569020 ZEB2O60315 1214 aa16.1■□□□□ 0.17
CNOT1-215ENST00000569020 CABYRO75952 493 aa16.1■□□□□ 0.17
CNOT1-215ENST00000569020 PPIGQ13427 754 aaKnown RBP eCLIP16.1■□□□□ 0.17
CNOT1-215ENST00000569020 IQSEC1Q6DN90 963 aa16.1■□□□□ 0.17
CNOT1-215ENST00000569020 EEPD1Q7L9B9 569 aa16.1■□□□□ 0.17
CNOT1-215ENST00000569020 FAM126BQ8IXS8 530 aa16.1■□□□□ 0.17
CNOT1-215ENST00000569020 TMEM199Q8N511 208 aa16.1■□□□□ 0.17
CNOT1-215ENST00000569020 RILPL2Q969X0 211 aa16.1■□□□□ 0.17
CNOT1-215ENST00000569020 TMEM47Q9BQJ4 181 aa16.1■□□□□ 0.17
CNOT1-215ENST00000569020 TTYH1Q9H313 450 aaPredicted RBP16.1■□□□□ 0.17
CNOT1-215ENST00000569020 PCP11498 1178 aaKnown RBP16.09■□□□□ 0.17
CNOT1-215ENST00000569020 SLC16A2P36021 539 aa16.09■□□□□ 0.17
CNOT1-215ENST00000569020 MFAP1P55081 439 aaKnown RBP16.09■□□□□ 0.17
CNOT1-215ENST00000569020 NMIQ13287 307 aaPredicted RBP16.09■□□□□ 0.17
CNOT1-215ENST00000569020 AAMPQ13685 434 aa16.09■□□□□ 0.17
CNOT1-215ENST00000569020 SYDE2Q5VT97 1194 aa16.09■□□□□ 0.17
CNOT1-215ENST00000569020 TTBK2Q6IQ55 1244 aa16.09■□□□□ 0.17
CNOT1-215ENST00000569020 BTNL9Q6UXG8 535 aa16.09■□□□□ 0.17
CNOT1-215ENST00000569020 FBXO16Q8IX29 292 aaPredicted RBP16.09■□□□□ 0.17
CNOT1-215ENST00000569020 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.09■□□□□ 0.17
CNOT1-215ENST00000569020 LNPKQ9C0E8 428 aa16.09■□□□□ 0.17
CNOT1-215ENST00000569020 VTA1Q9NP79 307 aa16.09■□□□□ 0.17
CNOT1-215ENST00000569020 ADD3Q9UEY8 706 aaKnown RBP16.09■□□□□ 0.17
CNOT1-215ENST00000569020 Q9Y3F1 56 aa16.09■□□□□ 0.17
CNOT1-215ENST00000569020 ASTN1O14525 1302 aa16.09■□□□□ 0.17
CNOT1-215ENST00000569020 FRMPD2Q68DX3 1309 aaPredicted RBP16.09■□□□□ 0.17
CNOT1-215ENST00000569020 CCDC171Q6TFL3 1326 aa16.09■□□□□ 0.17
CNOT1-215ENST00000569020 LAMA4Q16363 1823 aa16.08■□□□□ 0.17
CNOT1-215ENST00000569020 DYNC1LI2O43237 492 aaPredicted RBP16.08■□□□□ 0.16
CNOT1-215ENST00000569020 SMPD1P17405 629 aa16.08■□□□□ 0.16
CNOT1-215ENST00000569020 HAND2P61296 217 aa16.08■□□□□ 0.16
CNOT1-215ENST00000569020 FSCN1Q16658 493 aaKnown RBP16.08■□□□□ 0.16
CNOT1-215ENST00000569020 TAPT1Q6NXT6 567 aa16.08■□□□□ 0.16
CNOT1-215ENST00000569020 CXCL17Q6UXB2 119 aa16.08■□□□□ 0.16
CNOT1-215ENST00000569020 MFSD6Q6ZSS7 791 aa16.08■□□□□ 0.16
CNOT1-215ENST00000569020 ZNF589Q86UQ0 364 aaPredicted RBP16.08■□□□□ 0.16
CNOT1-215ENST00000569020 MYLIPQ8WY64 445 aa16.08■□□□□ 0.16
CNOT1-215ENST00000569020 TTC14Q96N46 770 aa16.08■□□□□ 0.16
CNOT1-215ENST00000569020 SEZ6LQ9BYH1 1024 aa16.08■□□□□ 0.16
CNOT1-215ENST00000569020 PPP1R12CQ9BZL4 782 aa16.08■□□□□ 0.16
CNOT1-215ENST00000569020 GPCPD1Q9NPB8 672 aa16.08■□□□□ 0.16
CNOT1-215ENST00000569020 PDGFCQ9NRA1 345 aa16.08■□□□□ 0.16
CNOT1-215ENST00000569020 PNMA2Q9UL42 364 aa16.08■□□□□ 0.16
CNOT1-215ENST00000569020 LOC102724159A0A0B4J2E5 919 aa16.07■□□□□ 0.16
CNOT1-215ENST00000569020 PTPDC1A2A3K4 754 aa16.07■□□□□ 0.16
CNOT1-215ENST00000569020 CD4P01730 458 aa16.07■□□□□ 0.16
CNOT1-215ENST00000569020 PDHBP11177 359 aa16.07■□□□□ 0.16
CNOT1-215ENST00000569020 FOSL2P15408 326 aa16.07■□□□□ 0.16
CNOT1-215ENST00000569020 CSF2RAP15509 400 aa16.07■□□□□ 0.16
CNOT1-215ENST00000569020 ALDH5A1P51649 535 aaPredicted RBP16.07■□□□□ 0.16
CNOT1-215ENST00000569020 ITGA7Q13683 1181 aa16.07■□□□□ 0.16
CNOT1-215ENST00000569020 BAATQ14032 418 aaPredicted RBP16.07■□□□□ 0.16
CNOT1-215ENST00000569020 PWP2Q15269 919 aaKnown RBP16.07■□□□□ 0.16
CNOT1-215ENST00000569020 AKNAD1Q5T1N1 836 aa16.07■□□□□ 0.16
CNOT1-215ENST00000569020 KIAA1211Q6ZU35 1233 aa16.07■□□□□ 0.16
CNOT1-215ENST00000569020 MAFAQ8NHW3 353 aaPredicted RBP16.07■□□□□ 0.16
CNOT1-215ENST00000569020 MORC4Q8TE76 937 aa16.07■□□□□ 0.16
CNOT1-215ENST00000569020 RWDD1Q9H446 243 aaPredicted RBP16.07■□□□□ 0.16
CNOT1-215ENST00000569020 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
CNOT1-215ENST00000569020 DDX49Q9Y6V7 483 aaKnown RBP16.07■□□□□ 0.16
CNOT1-215ENST00000569020 MYH6P13533 1939 aa16.06■□□□□ 0.16
CNOT1-215ENST00000569020 DNAJB2P25686 324 aa16.06■□□□□ 0.16
CNOT1-215ENST00000569020 B4GALNT3Q6L9W6 998 aa16.06■□□□□ 0.16
CNOT1-215ENST00000569020 PSRC1Q6PGN9 363 aaPredicted RBP16.06■□□□□ 0.16
CNOT1-215ENST00000569020 SLC43A3Q8NBI5 491 aa16.06■□□□□ 0.16
CNOT1-215ENST00000569020 YTHDC1Q96MU7 727 aaKnown RBP16.06■□□□□ 0.16
CNOT1-215ENST00000569020 PURBQ96QR8 312 aaKnown RBP16.06■□□□□ 0.16
CNOT1-215ENST00000569020 MPHOSPH6Q99547 160 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms