RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 AGBL1Q96MI9 1066 aa17.83■□□□□ 0.44
COMMD4-223ENST00000568301 GAS2L1Q99501 681 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-223ENST00000568301 A1CFQ9NQ94 594 aaKnown RBP17.83■□□□□ 0.44
COMMD4-223ENST00000568301 IL17RBQ9NRM6 502 aa17.83■□□□□ 0.44
COMMD4-223ENST00000568301 RNF146Q9NTX7 359 aa17.83■□□□□ 0.44
COMMD4-223ENST00000568301 ANAPC4Q9UJX5 808 aa17.83■□□□□ 0.44
COMMD4-223ENST00000568301 ISY1Q9ULR0 285 aaKnown RBP17.83■□□□□ 0.44
COMMD4-223ENST00000568301 STX8Q9UNK0 236 aa17.83■□□□□ 0.44
COMMD4-223ENST00000568301 TSPY2A6NKD2 308 aa17.82■□□□□ 0.44
COMMD4-223ENST00000568301 CTAGE5O15320 804 aa17.82■□□□□ 0.44
COMMD4-223ENST00000568301 FOXP2O15409 715 aa17.82■□□□□ 0.44
COMMD4-223ENST00000568301 TNFAIP2Q03169 654 aa17.82■□□□□ 0.44
COMMD4-223ENST00000568301 IKQ13123 557 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-223ENST00000568301 CCDC174Q6PII3 467 aa17.82■□□□□ 0.44
COMMD4-223ENST00000568301 TRERF1Q96PN7 1200 aa17.82■□□□□ 0.44
COMMD4-223ENST00000568301 SALL3Q9BXA9 1300 aa17.81■□□□□ 0.44
COMMD4-223ENST00000568301 SOWAHBA6NEL2 793 aa17.81■□□□□ 0.44
COMMD4-223ENST00000568301 FGRP09769 529 aa17.81■□□□□ 0.44
COMMD4-223ENST00000568301 CYP2C18P33260 490 aa17.81■□□□□ 0.44
COMMD4-223ENST00000568301 NOVP48745 357 aa17.81■□□□□ 0.44
COMMD4-223ENST00000568301 BEX3Q00994 111 aa17.81■□□□□ 0.44
COMMD4-223ENST00000568301 ADGRE1Q14246 886 aa17.81■□□□□ 0.44
COMMD4-223ENST00000568301 PRR12Q9ULL5 1215 aa17.81■□□□□ 0.44
COMMD4-223ENST00000568301 TRANK1O15050 2925 aa17.81■□□□□ 0.44
COMMD4-223ENST00000568301 BDP1A6H8Y1 2624 aa17.8■□□□□ 0.44
COMMD4-223ENST00000568301 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-223ENST00000568301 TLR3O15455 904 aaKnown RBP17.8■□□□□ 0.44
COMMD4-223ENST00000568301 ORC4O43929 436 aa17.8■□□□□ 0.44
COMMD4-223ENST00000568301 CABYRO75952 493 aa17.8■□□□□ 0.44
COMMD4-223ENST00000568301 CD4P01730 458 aa17.8■□□□□ 0.44
COMMD4-223ENST00000568301 ALAS1P13196 640 aa17.8■□□□□ 0.44
COMMD4-223ENST00000568301 COL9A1P20849 921 aa17.8■□□□□ 0.44
COMMD4-223ENST00000568301 CTDSPL2Q05D32 466 aa17.8■□□□□ 0.44
COMMD4-223ENST00000568301 ALX1Q15699 326 aa17.8■□□□□ 0.44
COMMD4-223ENST00000568301 AKNAD1Q5T1N1 836 aa17.8■□□□□ 0.44
COMMD4-223ENST00000568301 PSRC1Q6PGN9 363 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-223ENST00000568301 KCTD1Q719H9 257 aa17.8■□□□□ 0.44
COMMD4-223ENST00000568301 TICAM2Q86XR7 235 aa17.8■□□□□ 0.44
COMMD4-223ENST00000568301 EVI5LQ96CN4 794 aa17.8■□□□□ 0.44
COMMD4-223ENST00000568301 INCENPQ9NQS7 918 aa17.8■□□□□ 0.44
COMMD4-223ENST00000568301 CXXC1Q9P0U4 656 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-223ENST00000568301 ZBTB47Q9UFB7 747 aaPredicted RBP17.8■□□□□ 0.44
COMMD4-223ENST00000568301 GNEQ9Y223 722 aaKnown RBP17.8■□□□□ 0.44
COMMD4-223ENST00000568301 ASTN1O14525 1302 aa17.79■□□□□ 0.44
COMMD4-223ENST00000568301 RANBP6O60518 1105 aaKnown RBP17.79■□□□□ 0.44
COMMD4-223ENST00000568301 NMT2O60551 498 aa17.79■□□□□ 0.44
COMMD4-223ENST00000568301 CCDC85BQ15834 202 aaPredicted RBP17.79■□□□□ 0.44
COMMD4-223ENST00000568301 IQSEC1Q6DN90 963 aa17.79■□□□□ 0.44
COMMD4-223ENST00000568301 NOL8Q76FK4 1167 aaKnown RBP17.79■□□□□ 0.44
COMMD4-223ENST00000568301 SLC43A3Q8NBI5 491 aa17.79■□□□□ 0.44
COMMD4-223ENST00000568301 ATXN2LQ8WWM7 1075 aaKnown RBP17.79■□□□□ 0.44
COMMD4-223ENST00000568301 HERVK_113Q902F9 699 aa17.79■□□□□ 0.44
COMMD4-223ENST00000568301 SEZ6LQ9BYH1 1024 aa17.79■□□□□ 0.44
COMMD4-223ENST00000568301 IL23AQ9NPF7 189 aa17.79■□□□□ 0.44
COMMD4-223ENST00000568301 HELLSQ9NRZ9 838 aa17.79■□□□□ 0.44
COMMD4-223ENST00000568301 CYP39A1Q9NYL5 469 aa17.79■□□□□ 0.44
COMMD4-223ENST00000568301 Q9Y3F1 56 aa17.79■□□□□ 0.44
COMMD4-223ENST00000568301 GBF1Q92538 1859 aa17.79■□□□□ 0.44
COMMD4-223ENST00000568301 UMODL1Q5DID0 1318 aa17.78■□□□□ 0.44
COMMD4-223ENST00000568301 PTGS1P23219 599 aa17.78■□□□□ 0.44
COMMD4-223ENST00000568301 ANKRD45Q5TZF3 282 aa17.78■□□□□ 0.44
COMMD4-223ENST00000568301 VPS53Q5VIR6 699 aa17.78■□□□□ 0.44
COMMD4-223ENST00000568301 CXCL17Q6UXB2 119 aa17.78■□□□□ 0.44
COMMD4-223ENST00000568301 DCAF4Q8WV16 495 aa17.78■□□□□ 0.44
COMMD4-223ENST00000568301 CHMP4CQ96CF2 233 aa17.78■□□□□ 0.44
COMMD4-223ENST00000568301 ASB2Q96Q27 587 aa17.78■□□□□ 0.44
COMMD4-223ENST00000568301 AP5M1Q9H0R1 490 aa17.78■□□□□ 0.44
COMMD4-223ENST00000568301 THEGQ9P2T0 379 aa17.78■□□□□ 0.44
COMMD4-223ENST00000568301 MSRAQ9UJ68 235 aa17.78■□□□□ 0.44
COMMD4-223ENST00000568301 ICAM1P05362 532 aa17.77■□□□□ 0.44
COMMD4-223ENST00000568301 SMPD1P17405 629 aa17.77■□□□□ 0.44
COMMD4-223ENST00000568301 IGFBP4P22692 258 aa17.77■□□□□ 0.44
COMMD4-223ENST00000568301 FSCN1Q16658 493 aaKnown RBP17.77■□□□□ 0.44
COMMD4-223ENST00000568301 MUM1L1Q5H9M0 696 aa17.77■□□□□ 0.44
COMMD4-223ENST00000568301 TAPT1Q6NXT6 567 aa17.77■□□□□ 0.44
COMMD4-223ENST00000568301 BTNL9Q6UXG8 535 aa17.77■□□□□ 0.44
COMMD4-223ENST00000568301 OTOP2Q7RTS6 562 aa17.77■□□□□ 0.44
COMMD4-223ENST00000568301 TLK2Q86UE8 772 aa17.77■□□□□ 0.44
COMMD4-223ENST00000568301 MORC4Q8TE76 937 aa17.77■□□□□ 0.44
COMMD4-223ENST00000568301 NKX2-4Q9H2Z4 354 aa17.77■□□□□ 0.44
COMMD4-223ENST00000568301 HIPK3Q9H422 1215 aa17.77■□□□□ 0.44
COMMD4-223ENST00000568301 RAPGEFL1Q9UHV5 662 aa17.77■□□□□ 0.44
COMMD4-223ENST00000568301 CCPG1Q9ULG6 757 aa17.77■□□□□ 0.44
COMMD4-223ENST00000568301 YBX2Q9Y2T7 364 aaKnown RBP17.77■□□□□ 0.44
COMMD4-223ENST00000568301 DDX49Q9Y6V7 483 aaKnown RBP17.77■□□□□ 0.44
COMMD4-223ENST00000568301 NCOR1O75376 2440 aa17.77■□□□□ 0.43
COMMD4-223ENST00000568301 GRIN2DO15399 1336 aa17.76■□□□□ 0.43
COMMD4-223ENST00000568301 DYNC1LI2O43237 492 aaPredicted RBP17.76■□□□□ 0.43
COMMD4-223ENST00000568301 ZEB2O60315 1214 aa17.76■□□□□ 0.43
COMMD4-223ENST00000568301 FGAP02671 866 aa17.76■□□□□ 0.43
COMMD4-223ENST00000568301 FGBP02675 491 aa17.76■□□□□ 0.43
COMMD4-223ENST00000568301 PDE1AP54750 535 aa17.76■□□□□ 0.43
COMMD4-223ENST00000568301 CCL23P55773 120 aa17.76■□□□□ 0.43
COMMD4-223ENST00000568301 SNAP25P60880 206 aa17.76■□□□□ 0.43
COMMD4-223ENST00000568301 RAB30Q15771 203 aa17.76■□□□□ 0.43
COMMD4-223ENST00000568301 RANBP17Q9H2T7 1088 aaKnown RBP17.76■□□□□ 0.43
COMMD4-223ENST00000568301 VTA1Q9NP79 307 aa17.76■□□□□ 0.43
COMMD4-223ENST00000568301 TCP11L1Q9NUJ3 509 aa17.76■□□□□ 0.43
COMMD4-223ENST00000568301 LCTP09848 1927 aa17.75■□□□□ 0.43
COMMD4-223ENST00000568301 LOC102724159A0A0B4J2E5 919 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms