RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 ARMT1Q9H993 441 aa9.27□□□□□ -0.93
SMG1-214ENST00000568038 HELLSQ9NRZ9 838 aa9.27□□□□□ -0.93
SMG1-214ENST00000568038 AATFQ9NY61 560 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMG1-214ENST00000568038 SERPINA10Q9UK55 444 aa9.27□□□□□ -0.93
SMG1-214ENST00000568038 MYH7P12883 1935 aa9.27□□□□□ -0.93
SMG1-214ENST00000568038 MYH2Q9UKX2 1941 aa9.27□□□□□ -0.93
SMG1-214ENST00000568038 GPR75-ASB3A0A0A6YYF3 556 aa9.26□□□□□ -0.93
SMG1-214ENST00000568038 C1QTNF9BB2RNN3 333 aa9.26□□□□□ -0.93
SMG1-214ENST00000568038 GPAA1O43292 621 aa9.26□□□□□ -0.93
SMG1-214ENST00000568038 BAG3O95817 575 aa9.26□□□□□ -0.93
SMG1-214ENST00000568038 EGFRP00533 1210 aa9.26□□□□□ -0.93
SMG1-214ENST00000568038 ZNF280AP59817 542 aaPredicted RBP9.26□□□□□ -0.93
SMG1-214ENST00000568038 HIF1AQ16665 826 aa9.26□□□□□ -0.93
SMG1-214ENST00000568038 TBC1D10BQ4KMP7 808 aaPredicted RBP9.26□□□□□ -0.93
SMG1-214ENST00000568038 APOBEC3HQ6NTF7 200 aaKnown RBP9.26□□□□□ -0.93
SMG1-214ENST00000568038 C8orf86Q6ZUL3 223 aa9.26□□□□□ -0.93
SMG1-214ENST00000568038 ZNF589Q86UQ0 364 aaPredicted RBP9.26□□□□□ -0.93
SMG1-214ENST00000568038 TICAM2Q86XR7 235 aa9.26□□□□□ -0.93
SMG1-214ENST00000568038 LCORLQ8N3X6 602 aa9.26□□□□□ -0.93
SMG1-214ENST00000568038 ZNF526Q8TF50 670 aaPredicted RBP9.26□□□□□ -0.93
SMG1-214ENST00000568038 PRMT6Q96LA8 375 aaPredicted RBP9.26□□□□□ -0.93
SMG1-214ENST00000568038 ZDHHC15Q96MV8 337 aa9.26□□□□□ -0.93
SMG1-214ENST00000568038 IL25Q9H293 177 aa9.26□□□□□ -0.93
SMG1-214ENST00000568038 TDRD3Q9H7E2 651 aaKnown RBP9.26□□□□□ -0.93
SMG1-214ENST00000568038 MYOZ2Q9NPC6 264 aa9.26□□□□□ -0.93
SMG1-214ENST00000568038 GAKO14976 1311 aa9.26□□□□□ -0.93
SMG1-214ENST00000568038 M0R082 166 aa9.25□□□□□ -0.93
SMG1-214ENST00000568038 SGSM2O43147 1006 aa9.25□□□□□ -0.93
SMG1-214ENST00000568038 IGFBP4P22692 258 aa9.25□□□□□ -0.93
SMG1-214ENST00000568038 ADH7P40394 386 aa9.25□□□□□ -0.93
SMG1-214ENST00000568038 RTN1Q16799 776 aa9.25□□□□□ -0.93
SMG1-214ENST00000568038 KIF4BQ2VIQ3 1234 aa9.25□□□□□ -0.93
SMG1-214ENST00000568038 C8orf34Q49A92 452 aa9.25□□□□□ -0.93
SMG1-214ENST00000568038 CDC42EP5Q6NZY7 148 aa9.25□□□□□ -0.93
SMG1-214ENST00000568038 TMED8Q6PL24 325 aaPredicted RBP9.25□□□□□ -0.93
SMG1-214ENST00000568038 ZNF417Q8TAU3 575 aa9.25□□□□□ -0.93
SMG1-214ENST00000568038 FAM200AQ8TCP9 573 aa9.25□□□□□ -0.93
SMG1-214ENST00000568038 TRPM4Q8TD43 1214 aa9.25□□□□□ -0.93
SMG1-214ENST00000568038 SH3RF3Q8TEJ3 882 aaPredicted RBP9.25□□□□□ -0.93
SMG1-214ENST00000568038 STRBPQ96SI9 672 aaKnown RBP9.25□□□□□ -0.93
SMG1-214ENST00000568038 ZNF587Q96SQ5 575 aaPredicted RBP9.25□□□□□ -0.93
SMG1-214ENST00000568038 RIOK1Q9BRS2 568 aaKnown RBP9.25□□□□□ -0.93
SMG1-214ENST00000568038 USP40Q9NVE5 1235 aa9.25□□□□□ -0.93
SMG1-214ENST00000568038 HACL1Q9UJ83 578 aa9.25□□□□□ -0.93
SMG1-214ENST00000568038 MAST2Q6P0Q8 1798 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 ADAMTSL1Q8N6G6 1762 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 CLRN2A0PK11 232 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 ADARB2-AS1A8MUL3 147 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 WNT10BO00744 389 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 PRKAB2O43741 272 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 APPP05067 770 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 EPHX2P34913 555 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 MMP14P50281 582 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 CACNB3P54284 484 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 MFAP1P55081 439 aaKnown RBP9.24□□□□□ -0.93
SMG1-214ENST00000568038 RHBDL3P58872 404 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 NBPF9Q3BBW0 867 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 KIAA1211Q6ZU35 1233 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 CD163Q86VB7 1156 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 TEX11Q8IYF3 940 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 TGFBRAP1Q8WUH2 860 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 TNFRSF25Q93038 417 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 VTI1AQ96AJ9 217 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 CRNKL1Q9BZJ0 848 aaKnown RBP9.24□□□□□ -0.93
SMG1-214ENST00000568038 KLK14Q9P0G3 267 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 ZNF70Q9UC06 446 aaPredicted RBP9.24□□□□□ -0.93
SMG1-214ENST00000568038 SLC4A4Q9Y6R1 1079 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 ASTN2O75129 1339 aaPredicted RBP9.24□□□□□ -0.93
SMG1-214ENST00000568038 CCDC171Q6TFL3 1326 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 RAD50Q92878 1312 aa9.24□□□□□ -0.93
SMG1-214ENST00000568038 IQCA1LA6NCM1 817 aa9.23□□□□□ -0.93
SMG1-214ENST00000568038 TCP10L2B9ZVM9 353 aa9.23□□□□□ -0.93
SMG1-214ENST00000568038 MYO1BO43795 1136 aa9.23□□□□□ -0.93
SMG1-214ENST00000568038 ALBP02768 609 aa9.23□□□□□ -0.93
SMG1-214ENST00000568038 CHRNA4P43681 627 aa9.23□□□□□ -0.93
SMG1-214ENST00000568038 USP5P45974 858 aa9.23□□□□□ -0.93
SMG1-214ENST00000568038 PICALMQ13492 652 aa9.23□□□□□ -0.93
SMG1-214ENST00000568038 EAPPQ56P03 285 aaPredicted RBP9.23□□□□□ -0.93
SMG1-214ENST00000568038 VPS53Q5VIR6 699 aa9.23□□□□□ -0.93
SMG1-214ENST00000568038 SDR42E1Q8WUS8 393 aa9.23□□□□□ -0.93
SMG1-214ENST00000568038 ZBED3Q96IU2 234 aaPredicted RBP9.23□□□□□ -0.93
SMG1-214ENST00000568038 MDFIQ99750 246 aa9.23□□□□□ -0.93
SMG1-214ENST00000568038 UBE2OQ9C0C9 1292 aaKnown RBP9.23□□□□□ -0.93
SMG1-214ENST00000568038 VEZTQ9HBM0 779 aa9.23□□□□□ -0.93
SMG1-214ENST00000568038 ANO2Q9NQ90 1003 aa9.23□□□□□ -0.93
SMG1-214ENST00000568038 ADARB2Q9NS39 739 aaKnown RBP9.23□□□□□ -0.93
SMG1-214ENST00000568038 TMOD2Q9NZR1 351 aa9.23□□□□□ -0.93
SMG1-214ENST00000568038 SCAF8Q9UPN6 1271 aaKnown RBP9.23□□□□□ -0.93
SMG1-214ENST00000568038 STARD13Q9Y3M8 1113 aa9.23□□□□□ -0.93
SMG1-214ENST00000568038 SRCAPQ6ZRS2 3230 aa9.22□□□□□ -0.93
SMG1-214ENST00000568038 GSG1L2A8MUP6 293 aa9.22□□□□□ -0.93
SMG1-214ENST00000568038 PATL2C9JE40 543 aaKnown RBP9.22□□□□□ -0.93
SMG1-214ENST00000568038 ADAM23O75077 832 aa9.22□□□□□ -0.93
SMG1-214ENST00000568038 WDHD1O75717 1129 aaPredicted RBP9.22□□□□□ -0.93
SMG1-214ENST00000568038 FURINP09958 794 aa9.22□□□□□ -0.93
SMG1-214ENST00000568038 HSPD1P10809 573 aaKnown RBP9.22□□□□□ -0.93
SMG1-214ENST00000568038 VEGFAP15692 232 aaPredicted RBP9.22□□□□□ -0.93
SMG1-214ENST00000568038 GNAT2P19087 354 aa9.22□□□□□ -0.93
SMG1-214ENST00000568038 PTH1RQ03431 593 aa9.22□□□□□ -0.93
SMG1-214ENST00000568038 TCP10Q12799 353 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms