RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 MFSD14CQ5VZR4 134 aa14.78□□□□□ -0.04
GINS3-209ENST00000567909 FBXO11Q86XK2 927 aa14.78□□□□□ -0.04
GINS3-209ENST00000567909 CMTR1Q8N1G2 835 aaKnown RBP14.78□□□□□ -0.04
GINS3-209ENST00000567909 FANCBQ8NB91 859 aa14.78□□□□□ -0.04
GINS3-209ENST00000567909 PIGSQ96S52 555 aa14.78□□□□□ -0.04
GINS3-209ENST00000567909 TMEM106CQ9BVX2 250 aa14.78□□□□□ -0.04
GINS3-209ENST00000567909 TM6SF1Q9BZW5 370 aa14.78□□□□□ -0.04
GINS3-209ENST00000567909 UNC93B1Q9H1C4 597 aa14.78□□□□□ -0.04
GINS3-209ENST00000567909 A1CFQ9NQ94 594 aaKnown RBP14.78□□□□□ -0.04
GINS3-209ENST00000567909 LCTP09848 1927 aa14.78□□□□□ -0.04
GINS3-209ENST00000567909 GOLGA8AA7E2F4 631 aa14.77□□□□□ -0.05
GINS3-209ENST00000567909 GOLGA8BA8MQT2 603 aa14.77□□□□□ -0.05
GINS3-209ENST00000567909 POTEB2H3BUK9 544 aa14.77□□□□□ -0.05
GINS3-209ENST00000567909 NFIBO00712 420 aa14.77□□□□□ -0.05
GINS3-209ENST00000567909 ZBTB5O15062 677 aa14.77□□□□□ -0.05
GINS3-209ENST00000567909 CYTH3O43739 400 aa14.77□□□□□ -0.05
GINS3-209ENST00000567909 CCL5P13501 91 aa14.77□□□□□ -0.05
GINS3-209ENST00000567909 PRKAR2AP13861 404 aaKnown RBP14.77□□□□□ -0.05
GINS3-209ENST00000567909 ANAPC15P60006 121 aa14.77□□□□□ -0.05
GINS3-209ENST00000567909 RTN1Q16799 776 aa14.77□□□□□ -0.05
GINS3-209ENST00000567909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.77□□□□□ -0.05
GINS3-209ENST00000567909 CCDC82Q8N4S0 544 aa14.77□□□□□ -0.05
GINS3-209ENST00000567909 SRBD1Q8N5C6 995 aaKnown RBP14.77□□□□□ -0.05
GINS3-209ENST00000567909 MAML3Q96JK9 1138 aa14.77□□□□□ -0.05
GINS3-209ENST00000567909 RNF208Q9H0X6 261 aa14.77□□□□□ -0.05
GINS3-209ENST00000567909 RIOX1Q9H6W3 641 aa14.77□□□□□ -0.05
GINS3-209ENST00000567909 PFASO15067 1338 aa14.76□□□□□ -0.05
GINS3-209ENST00000567909 ABCB11O95342 1321 aa14.76□□□□□ -0.05
GINS3-209ENST00000567909 PTPDC1A2A3K4 754 aa14.76□□□□□ -0.05
GINS3-209ENST00000567909 CYP2C19P33261 490 aa14.76□□□□□ -0.05
GINS3-209ENST00000567909 CNTN2Q02246 1040 aa14.76□□□□□ -0.05
GINS3-209ENST00000567909 CACNB2Q08289 660 aaPredicted RBP14.76□□□□□ -0.05
GINS3-209ENST00000567909 ZNF792Q3KQV3 632 aa14.76□□□□□ -0.05
GINS3-209ENST00000567909 CLEC4DQ8WXI8 215 aa14.76□□□□□ -0.05
GINS3-209ENST00000567909 MTMR8Q96EF0 704 aa14.76□□□□□ -0.05
GINS3-209ENST00000567909 LZTS2Q9BRK4 669 aa14.76□□□□□ -0.05
GINS3-209ENST00000567909 SPZ1Q9BXG8 430 aa14.76□□□□□ -0.05
GINS3-209ENST00000567909 AMNQ9BXJ7 453 aa14.76□□□□□ -0.05
GINS3-209ENST00000567909 PDRG1Q9NUG6 133 aa14.76□□□□□ -0.05
GINS3-209ENST00000567909 DNAJC25-GNG10A0A024R161 153 aa14.75□□□□□ -0.05
GINS3-209ENST00000567909 PNMA6FA0A0J9YX94 578 aa14.75□□□□□ -0.05
GINS3-209ENST00000567909 POTEFA5A3E0 1075 aa14.75□□□□□ -0.05
GINS3-209ENST00000567909 PPP1R11O60927 126 aaPredicted RBP14.75□□□□□ -0.05
GINS3-209ENST00000567909 METAP2P50579 478 aaKnown RBP eCLIP14.75□□□□□ -0.05
GINS3-209ENST00000567909 BAATQ14032 418 aaPredicted RBP14.75□□□□□ -0.05
GINS3-209ENST00000567909 OLFML2BQ68BL8 750 aa14.75□□□□□ -0.05
GINS3-209ENST00000567909 TMTC3Q6ZXV5 915 aa14.75□□□□□ -0.05
GINS3-209ENST00000567909 RRP36Q96EU6 259 aaKnown RBP14.75□□□□□ -0.05
GINS3-209ENST00000567909 LARP6Q9BRS8 491 aaKnown RBP14.75□□□□□ -0.05
GINS3-209ENST00000567909 AGXT2Q9BYV1 514 aa14.75□□□□□ -0.05
GINS3-209ENST00000567909 HMX1Q9NP08 348 aaPredicted RBP14.75□□□□□ -0.05
GINS3-209ENST00000567909 RBM28Q9NW13 759 aaKnown RBP14.75□□□□□ -0.05
GINS3-209ENST00000567909 CYP39A1Q9NYL5 469 aa14.75□□□□□ -0.05
GINS3-209ENST00000567909 SEC63Q9UGP8 760 aaKnown RBP14.75□□□□□ -0.05
GINS3-209ENST00000567909 DIS3Q9Y2L1 958 aaKnown RBP14.75□□□□□ -0.05
GINS3-209ENST00000567909 MRPL11Q9Y3B7 192 aaKnown RBP14.75□□□□□ -0.05
GINS3-209ENST00000567909 PCDHA1Q9Y5I3 950 aa14.75□□□□□ -0.05
GINS3-209ENST00000567909 RPTORQ8N122 1335 aa14.74□□□□□ -0.05
GINS3-209ENST00000567909 hCG_1642624A0A1W2PR95 340 aa14.74□□□□□ -0.05
GINS3-209ENST00000567909 CALML3P27482 149 aa14.74□□□□□ -0.05
GINS3-209ENST00000567909 SMARCA1P28370 1054 aa14.74□□□□□ -0.05
GINS3-209ENST00000567909 CNGA1P29973 690 aa14.74□□□□□ -0.05
GINS3-209ENST00000567909 TOB2Q14106 344 aaPredicted RBP14.74□□□□□ -0.05
GINS3-209ENST00000567909 IFFO2Q5TF58 517 aa14.74□□□□□ -0.05
GINS3-209ENST00000567909 SLC30A10Q6XR72 485 aa14.74□□□□□ -0.05
GINS3-209ENST00000567909 RNF207Q6ZRF8 634 aa14.74□□□□□ -0.05
GINS3-209ENST00000567909 FBXL16Q8N461 479 aa14.74□□□□□ -0.05
GINS3-209ENST00000567909 FAM133AQ8N9E0 248 aa14.74□□□□□ -0.05
GINS3-209ENST00000567909 PURBQ96QR8 312 aaKnown RBP14.74□□□□□ -0.05
GINS3-209ENST00000567909 TINF2Q9BSI4 451 aa14.74□□□□□ -0.05
GINS3-209ENST00000567909 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.74□□□□□ -0.05
GINS3-209ENST00000567909 FRMPD3Q5JV73 1810 aa14.73□□□□□ -0.05
GINS3-209ENST00000567909 SOWAHBA6NEL2 793 aa14.73□□□□□ -0.05
GINS3-209ENST00000567909 CDC27P30260 824 aa14.73□□□□□ -0.05
GINS3-209ENST00000567909 CCND3P30281 292 aaPredicted RBP14.73□□□□□ -0.05
GINS3-209ENST00000567909 ADD1P35611 737 aaKnown RBP14.73□□□□□ -0.05
GINS3-209ENST00000567909 RCAN1P53805 252 aa14.73□□□□□ -0.05
GINS3-209ENST00000567909 PRAMEF19Q5SWL8 479 aa14.73□□□□□ -0.05
GINS3-209ENST00000567909 MAP3K21Q5TCX8 1036 aa14.73□□□□□ -0.05
GINS3-209ENST00000567909 TBC1D5Q92609 795 aa14.73□□□□□ -0.05
GINS3-209ENST00000567909 FGD4Q96M96 766 aa14.73□□□□□ -0.05
GINS3-209ENST00000567909 DEFB118Q96PH6 123 aa14.73□□□□□ -0.05
GINS3-209ENST00000567909 BRCA2P51587 3418 aa14.73□□□□□ -0.05
GINS3-209ENST00000567909 CFBP00751 764 aa14.72□□□□□ -0.05
GINS3-209ENST00000567909 GJB1P08034 283 aa14.72□□□□□ -0.05
GINS3-209ENST00000567909 EN2P19622 333 aaPredicted RBP14.72□□□□□ -0.05
GINS3-209ENST00000567909 PDIA3P30101 505 aaKnown RBP14.72□□□□□ -0.05
GINS3-209ENST00000567909 RPS6P62753 249 aaKnown RBP14.72□□□□□ -0.05
GINS3-209ENST00000567909 CCT2P78371 535 aaKnown RBP14.72□□□□□ -0.05
GINS3-209ENST00000567909 TRAF1Q13077 416 aa14.72□□□□□ -0.05
GINS3-209ENST00000567909 MCF2L2Q86YR7 1114 aa14.72□□□□□ -0.05
GINS3-209ENST00000567909 TRPV1Q8NER1 839 aa14.72□□□□□ -0.05
GINS3-209ENST00000567909 C22orf23Q9BZE7 217 aa14.72□□□□□ -0.05
GINS3-209ENST00000567909 UPF2Q9HAU5 1272 aaKnown RBP14.72□□□□□ -0.05
GINS3-209ENST00000567909 FAM217BQ9NTX9 383 aaPredicted RBP14.72□□□□□ -0.05
GINS3-209ENST00000567909 CNTNAP5Q8WYK1 1306 aa14.71□□□□□ -0.05
GINS3-209ENST00000567909 CCDC196A0A1B0GTZ2 297 aa14.71□□□□□ -0.05
GINS3-209ENST00000567909 IGHA2P01877 340 aa14.71□□□□□ -0.05
GINS3-209ENST00000567909 CYBAP13498 195 aa14.71□□□□□ -0.05
GINS3-209ENST00000567909 NEK4P51957 841 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms