RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 ESYT2A0FGR8 921 aa11.95□□□□□ -0.5
TCF4-236ENST00000567880 GADD45BO75293 160 aaPredicted RBP11.95□□□□□ -0.5
TCF4-236ENST00000567880 PDE4DQ08499 809 aa11.95□□□□□ -0.5
TCF4-236ENST00000567880 STK38Q15208 465 aa11.95□□□□□ -0.5
TCF4-236ENST00000567880 SF3A1Q15459 793 aaKnown RBP11.95□□□□□ -0.5
TCF4-236ENST00000567880 RILPL1Q5EBL4 403 aa11.95□□□□□ -0.5
TCF4-236ENST00000567880 LDLRAD1Q5T700 205 aa11.95□□□□□ -0.5
TCF4-236ENST00000567880 ANO1Q5XXA6 986 aa11.95□□□□□ -0.5
TCF4-236ENST00000567880 PPP1R18Q6NYC8 613 aa11.95□□□□□ -0.5
TCF4-236ENST00000567880 GADL1Q6ZQY3 521 aa11.95□□□□□ -0.5
TCF4-236ENST00000567880 REXO1Q8N1G1 1221 aaKnown RBP11.95□□□□□ -0.5
TCF4-236ENST00000567880 TMEM87AQ8NBN3 555 aa11.95□□□□□ -0.5
TCF4-236ENST00000567880 BICD2Q8TD16 824 aa11.95□□□□□ -0.5
TCF4-236ENST00000567880 SLC10A4Q96EP9 437 aa11.95□□□□□ -0.5
TCF4-236ENST00000567880 RANBP17Q9H2T7 1088 aaKnown RBP11.95□□□□□ -0.5
TCF4-236ENST00000567880 M0R2N6 131 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 TOB1P50616 345 aaPredicted RBP11.94□□□□□ -0.5
TCF4-236ENST00000567880 UBE2SQ16763 222 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 SH3D19Q5HYK7 790 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 JAKMIP3Q5VZ66 844 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 CPXCR1Q8N123 301 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 C2orf69Q8N8R5 385 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 CUL5Q93034 780 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 PSTPIP2Q9H939 334 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 POLR3EQ9NVU0 708 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 TMEM260Q9NX78 707 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 RTEL1Q9NZ71 1219 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 PPP1R9AQ9ULJ8 1098 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 NOL7Q9UMY1 257 aaKnown RBP11.94□□□□□ -0.5
TCF4-236ENST00000567880 CTDP1Q9Y5B0 961 aaPredicted RBP11.94□□□□□ -0.5
TCF4-236ENST00000567880 DDX49Q9Y6V7 483 aaKnown RBP11.94□□□□□ -0.5
TCF4-236ENST00000567880 PPIL2Q13356 520 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 TREML2Q5T2D2 321 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 ATG4CQ96DT6 458 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 PGBD1Q96JS3 809 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 RIC8AQ9NPQ8 531 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 PCDHB6Q9Y5E3 794 aa11.94□□□□□ -0.5
TCF4-236ENST00000567880 RBBP6Q7Z6E9 1792 aaKnown RBP11.93□□□□□ -0.5
TCF4-236ENST00000567880 ELP1O95163 1332 aa11.93□□□□□ -0.5
TCF4-236ENST00000567880 GOLGA6L4A6NEF3 574 aa11.93□□□□□ -0.5
TCF4-236ENST00000567880 ITGBL1O95965 494 aaPredicted RBP11.93□□□□□ -0.5
TCF4-236ENST00000567880 ME1P48163 572 aa11.93□□□□□ -0.5
TCF4-236ENST00000567880 NASPP49321 788 aaPredicted RBP11.93□□□□□ -0.5
TCF4-236ENST00000567880 MRPL12P52815 198 aaKnown RBP11.93□□□□□ -0.5
TCF4-236ENST00000567880 FKBP1BP68106 108 aa11.93□□□□□ -0.5
TCF4-236ENST00000567880 INF2Q27J81 1249 aa11.93□□□□□ -0.5
TCF4-236ENST00000567880 LINC00301Q8NCQ3 95 aa11.93□□□□□ -0.5
TCF4-236ENST00000567880 WNK4Q96J92 1243 aa11.93□□□□□ -0.5
TCF4-236ENST00000567880 AGBL1Q96MI9 1066 aa11.93□□□□□ -0.5
TCF4-236ENST00000567880 RAVER2Q9HCJ3 691 aaKnown RBP11.93□□□□□ -0.5
TCF4-236ENST00000567880 RCOR1Q9UKL0 485 aa11.93□□□□□ -0.5
TCF4-236ENST00000567880 CCPG1Q9ULG6 757 aa11.93□□□□□ -0.5
TCF4-236ENST00000567880 A0A0G2JLL6 359 aaPredicted RBP11.92□□□□□ -0.5
TCF4-236ENST00000567880 USP17L15C9J2P7 530 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 USP17L13C9JLJ4 530 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 USP17L11C9JVI0 530 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 USP17L18D6R9N7 530 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 USP17L22D6RA61 530 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 USP17L17D6RBQ6 530 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 USP17L19D6RCP7 530 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 USP17L20D6RJB6 530 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 WNT7AO00755 349 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 CXCL11O14625 94 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 TRIM66O15016 1216 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 SPTLC2O15270 562 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 YEATS4O95619 227 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 MARCKSP29966 332 aaPredicted RBP11.92□□□□□ -0.5
TCF4-236ENST00000567880 GJA5P36382 358 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 UBE2HP62256 183 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 USP17L24Q0WX57 530 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 COG2Q14746 738 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 NONOQ15233 471 aaKnown RBP eCLIP11.92□□□□□ -0.5
TCF4-236ENST00000567880 TTC38Q5R3I4 469 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 CST9Q5W186 159 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 USP17L6PQ6QN14 398 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 CATSPERGQ6ZRH7 1159 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 KRT25Q7Z3Z0 450 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 PRRT2Q7Z6L0 340 aaPredicted RBP11.92□□□□□ -0.5
TCF4-236ENST00000567880 GPT2Q8TD30 523 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 SLC38A10Q9HBR0 1119 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 KCNH4Q9UQ05 1017 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 ZNF536O15090 1300 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 VWA5AO00534 786 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 ZBED4O75132 1171 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 ICAM1P05362 532 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 TRAF1Q13077 416 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 ZNF174Q15697 407 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 SKOR2Q2VWA4 1001 aaPredicted RBP11.92□□□□□ -0.5
TCF4-236ENST00000567880 HOMER2Q9NSB8 354 aa11.92□□□□□ -0.5
TCF4-236ENST00000567880 CFBP00751 764 aa11.91□□□□□ -0.5
TCF4-236ENST00000567880 ALAS1P13196 640 aa11.91□□□□□ -0.5
TCF4-236ENST00000567880 HOXA13P31271 388 aaPredicted RBP11.91□□□□□ -0.5
TCF4-236ENST00000567880 DSG3P32926 999 aa11.91□□□□□ -0.5
TCF4-236ENST00000567880 MCM7P33993 719 aa11.91□□□□□ -0.5
TCF4-236ENST00000567880 SLC39A14Q15043 492 aa11.91□□□□□ -0.5
TCF4-236ENST00000567880 PTPAQ15257 358 aa11.91□□□□□ -0.5
TCF4-236ENST00000567880 PROCA1Q8NCQ7 364 aaPredicted RBP11.91□□□□□ -0.5
TCF4-236ENST00000567880 KCNG4Q8TDN1 519 aa11.91□□□□□ -0.5
TCF4-236ENST00000567880 TBCKQ8TEA7 893 aa11.91□□□□□ -0.5
TCF4-236ENST00000567880 GLT8D2Q9H1C3 349 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms