RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 ZFRQ96KR1 1074 aaKnown RBP10.93□□□□□ -0.66
CDH13-210ENST00000567445 SEC62Q99442 399 aaKnown RBP10.93□□□□□ -0.66
CDH13-210ENST00000567445 FSD1Q9BTV5 496 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 XPNPEP3Q9NQH7 507 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 CNPY2Q9Y2B0 182 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 RIPK3Q9Y572 518 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 PLIN4Q96Q06 1357 aa10.93□□□□□ -0.66
CDH13-210ENST00000567445 LAMA2P24043 3122 aaKnown RBP10.92□□□□□ -0.66
CDH13-210ENST00000567445 ZBED4O75132 1171 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 SLC3A2P08195 630 aaKnown RBP10.92□□□□□ -0.66
CDH13-210ENST00000567445 ZNF865P0CJ78 1059 aaPredicted RBP10.92□□□□□ -0.66
CDH13-210ENST00000567445 TSPY3P0CV98 308 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 TSPY8P0CW00 308 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 AKR1A1P14550 325 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 TAL1P17542 331 aaPredicted RBP10.92□□□□□ -0.66
CDH13-210ENST00000567445 TRIM60Q495X7 471 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 ZMYM1Q5SVZ6 1142 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 Q7L0L9 218 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 RNF180Q86T96 592 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 PACS2Q86VP3 889 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 NEDD1Q8NHV4 660 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 FERMT2Q96AC1 680 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 KIFC2Q96AC6 838 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 DDX11Q96FC9 970 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 NAPBQ9H115 298 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 SLC38A10Q9HBR0 1119 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 SEPT9Q9UHD8 586 aaPredicted RBP10.92□□□□□ -0.66
CDH13-210ENST00000567445 FEM1BQ9UK73 627 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 PHF24Q9UPV7 400 aa10.92□□□□□ -0.66
CDH13-210ENST00000567445 CTDP1Q9Y5B0 961 aaPredicted RBP10.92□□□□□ -0.66
CDH13-210ENST00000567445 SYNGAP1Q96PV0 1343 aa10.91□□□□□ -0.66
CDH13-210ENST00000567445 DNAJC25-GNG10A0A024R161 153 aa10.91□□□□□ -0.66
CDH13-210ENST00000567445 PGK1P00558 417 aa10.91□□□□□ -0.66
CDH13-210ENST00000567445 OAZ1P54368 228 aa10.91□□□□□ -0.66
CDH13-210ENST00000567445 PPARAQ07869 468 aa10.91□□□□□ -0.66
CDH13-210ENST00000567445 MAMDC4Q6UXC1 1216 aa10.91□□□□□ -0.66
CDH13-210ENST00000567445 CPXCR1Q8N123 301 aa10.91□□□□□ -0.66
CDH13-210ENST00000567445 LRRC47Q8N1G4 583 aaKnown RBP10.91□□□□□ -0.66
CDH13-210ENST00000567445 SLC17A8Q8NDX2 589 aa10.91□□□□□ -0.66
CDH13-210ENST00000567445 PRDM5Q9NQX1 630 aaPredicted RBP10.91□□□□□ -0.66
CDH13-210ENST00000567445 MTMR10Q9NXD2 777 aa10.91□□□□□ -0.66
CDH13-210ENST00000567445 LTBP2Q14767 1821 aa10.91□□□□□ -0.66
CDH13-210ENST00000567445 SOWAHBA6NEL2 793 aa10.9□□□□□ -0.66
CDH13-210ENST00000567445 SNAI1O95863 264 aaPredicted RBP10.9□□□□□ -0.66
CDH13-210ENST00000567445 BMP3P12645 472 aa10.9□□□□□ -0.66
CDH13-210ENST00000567445 SLC4A3P48751 1232 aa10.9□□□□□ -0.66
CDH13-210ENST00000567445 RRP1P56182 461 aaKnown RBP10.9□□□□□ -0.66
CDH13-210ENST00000567445 TFAP4Q01664 338 aa10.9□□□□□ -0.66
CDH13-210ENST00000567445 SLFN13Q68D06 897 aa10.9□□□□□ -0.66
CDH13-210ENST00000567445 RAVER2Q9HCJ3 691 aaKnown RBP10.9□□□□□ -0.66
CDH13-210ENST00000567445 PDLIM7Q9NR12 457 aa10.9□□□□□ -0.66
CDH13-210ENST00000567445 FBXO40Q9UH90 709 aa10.9□□□□□ -0.66
CDH13-210ENST00000567445 SALL3Q9BXA9 1300 aa10.9□□□□□ -0.67
CDH13-210ENST00000567445 A0A0C4DFX4 3053 aa10.9□□□□□ -0.67
CDH13-210ENST00000567445 A0A1W2PQ45 241 aaPredicted RBP10.89□□□□□ -0.67
CDH13-210ENST00000567445 A0A1W2PQY0 241 aa10.89□□□□□ -0.67
CDH13-210ENST00000567445 TRIM43BA6NCK2 446 aa10.89□□□□□ -0.67
CDH13-210ENST00000567445 TMEM232C9JQI7 657 aa10.89□□□□□ -0.67
CDH13-210ENST00000567445 FOXP2O15409 715 aa10.89□□□□□ -0.67
CDH13-210ENST00000567445 ADAMTS4O75173 837 aa10.89□□□□□ -0.67
CDH13-210ENST00000567445 FDX1P10109 184 aa10.89□□□□□ -0.67
CDH13-210ENST00000567445 PRSS12P56730 875 aa10.89□□□□□ -0.67
CDH13-210ENST00000567445 TLE2Q04725 743 aa10.89□□□□□ -0.67
CDH13-210ENST00000567445 ANKRD35Q8N283 1001 aa10.89□□□□□ -0.67
CDH13-210ENST00000567445 CHST13Q8NET6 341 aa10.89□□□□□ -0.67
CDH13-210ENST00000567445 TRIM43Q96BQ3 446 aaPredicted RBP10.89□□□□□ -0.67
CDH13-210ENST00000567445 LENG1Q96BZ8 264 aaPredicted RBP10.89□□□□□ -0.67
CDH13-210ENST00000567445 GMCL1Q96IK5 515 aa10.89□□□□□ -0.67
CDH13-210ENST00000567445 TSEN34Q9BSV6 310 aaKnown RBP10.89□□□□□ -0.67
CDH13-210ENST00000567445 FAM184BQ9ULE4 1060 aa10.89□□□□□ -0.67
CDH13-210ENST00000567445 STXBP5LQ9Y2K9 1186 aa10.89□□□□□ -0.67
CDH13-210ENST00000567445 SLC1A4P43007 532 aa10.88□□□□□ -0.67
CDH13-210ENST00000567445 STAT2P52630 851 aa10.88□□□□□ -0.67
CDH13-210ENST00000567445 ANKRD45Q5TZF3 282 aa10.88□□□□□ -0.67
CDH13-210ENST00000567445 FAM109BQ6ICB4 259 aaPredicted RBP10.88□□□□□ -0.67
CDH13-210ENST00000567445 CCDC129Q6ZRS4 1044 aa10.88□□□□□ -0.67
CDH13-210ENST00000567445 SH3RF1Q7Z6J0 888 aa10.88□□□□□ -0.67
CDH13-210ENST00000567445 FAM160B2Q86V87 743 aa10.88□□□□□ -0.67
CDH13-210ENST00000567445 CHURC1Q8WUH1 139 aa10.88□□□□□ -0.67
CDH13-210ENST00000567445 BADQ92934 168 aa10.88□□□□□ -0.67
CDH13-210ENST00000567445 EVI5LQ96CN4 794 aa10.88□□□□□ -0.67
CDH13-210ENST00000567445 ZHX1Q9UKY1 873 aaPredicted RBP10.88□□□□□ -0.67
CDH13-210ENST00000567445 ISY1Q9ULR0 285 aaKnown RBP10.88□□□□□ -0.67
CDH13-210ENST00000567445 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.88□□□□□ -0.67
CDH13-210ENST00000567445 TACC3Q9Y6A5 838 aa10.88□□□□□ -0.67
CDH13-210ENST00000567445 SYNRGQ9UMZ2 1314 aa10.88□□□□□ -0.67
CDH13-210ENST00000567445 TSPY2A6NKD2 308 aa10.87□□□□□ -0.67
CDH13-210ENST00000567445 DUSP11O75319 330 aaKnown RBP10.87□□□□□ -0.67
CDH13-210ENST00000567445 CLTBP09497 229 aa10.87□□□□□ -0.67
CDH13-210ENST00000567445 MCCP23508 829 aa10.87□□□□□ -0.67
CDH13-210ENST00000567445 ACLYP53396 1101 aa10.87□□□□□ -0.67
CDH13-210ENST00000567445 CTDSPL2Q05D32 466 aa10.87□□□□□ -0.67
CDH13-210ENST00000567445 HDAC1Q13547 482 aaPredicted RBP10.87□□□□□ -0.67
CDH13-210ENST00000567445 ACVR2BQ13705 512 aa10.87□□□□□ -0.67
CDH13-210ENST00000567445 SHHQ15465 462 aa10.87□□□□□ -0.67
CDH13-210ENST00000567445 NUP133Q8WUM0 1156 aa10.87□□□□□ -0.67
CDH13-210ENST00000567445 STAG1Q8WVM7 1258 aa10.87□□□□□ -0.67
CDH13-210ENST00000567445 FGD4Q96M96 766 aa10.87□□□□□ -0.67
CDH13-210ENST00000567445 ABHD16BQ9H3Z7 469 aa10.87□□□□□ -0.67
CDH13-210ENST00000567445 HOMER2Q9NSB8 354 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms