RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 CYP39A1Q9NYL5 469 aa17.9■□□□□ 0.46
SMPD3-208ENST00000566723 KIAA0355O15063 1070 aa17.89■□□□□ 0.45
SMPD3-208ENST00000566723 PDHBP11177 359 aa17.89■□□□□ 0.45
SMPD3-208ENST00000566723 SLC16A2P36021 539 aa17.89■□□□□ 0.45
SMPD3-208ENST00000566723 GJA9P57773 515 aa17.89■□□□□ 0.45
SMPD3-208ENST00000566723 ANKRD33Q7Z3H0 272 aa17.89■□□□□ 0.45
SMPD3-208ENST00000566723 PCSK9Q8NBP7 692 aaKnown RBP17.89■□□□□ 0.45
SMPD3-208ENST00000566723 ASTN1O14525 1302 aa17.89■□□□□ 0.45
SMPD3-208ENST00000566723 ELP1O95163 1332 aa17.89■□□□□ 0.45
SMPD3-208ENST00000566723 NEDD4P46934 1319 aa17.89■□□□□ 0.45
SMPD3-208ENST00000566723 FRMPD2Q68DX3 1309 aaPredicted RBP17.89■□□□□ 0.45
SMPD3-208ENST00000566723 HIP1O00291 1037 aa17.88■□□□□ 0.45
SMPD3-208ENST00000566723 ASGR1P07306 291 aa17.88■□□□□ 0.45
SMPD3-208ENST00000566723 IRX5P78411 483 aaPredicted RBP17.88■□□□□ 0.45
SMPD3-208ENST00000566723 CWC27Q6UX04 472 aaKnown RBP17.88■□□□□ 0.45
SMPD3-208ENST00000566723 NSMFQ6X4W1 530 aa17.88■□□□□ 0.45
SMPD3-208ENST00000566723 ESR2Q92731 530 aa17.88■□□□□ 0.45
SMPD3-208ENST00000566723 GLT1D1Q96MS3 346 aa17.88■□□□□ 0.45
SMPD3-208ENST00000566723 TTC14Q96N46 770 aa17.88■□□□□ 0.45
SMPD3-208ENST00000566723 TOX2Q96NM4 488 aa17.88■□□□□ 0.45
SMPD3-208ENST00000566723 GPCPD1Q9NPB8 672 aa17.88■□□□□ 0.45
SMPD3-208ENST00000566723 MTMR10Q9NXD2 777 aa17.88■□□□□ 0.45
SMPD3-208ENST00000566723 SNHG28P0DPA3 235 aa17.87■□□□□ 0.45
SMPD3-208ENST00000566723 ITGB8P26012 769 aa17.87■□□□□ 0.45
SMPD3-208ENST00000566723 NT5C2P49902 561 aa17.87■□□□□ 0.45
SMPD3-208ENST00000566723 NKX3-2P78367 333 aa17.87■□□□□ 0.45
SMPD3-208ENST00000566723 TNFAIP2Q03169 654 aa17.87■□□□□ 0.45
SMPD3-208ENST00000566723 ZNF543Q08ER8 600 aa17.87■□□□□ 0.45
SMPD3-208ENST00000566723 FAAP100Q0VG06 881 aa17.87■□□□□ 0.45
SMPD3-208ENST00000566723 SHHQ15465 462 aa17.87■□□□□ 0.45
SMPD3-208ENST00000566723 GNASQ5JWF2 1037 aa17.87■□□□□ 0.45
SMPD3-208ENST00000566723 C9orf50Q5SZB4 431 aa17.87■□□□□ 0.45
SMPD3-208ENST00000566723 MROH7Q68CQ1 1323 aa17.87■□□□□ 0.45
SMPD3-208ENST00000566723 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.86■□□□□ 0.45
SMPD3-208ENST00000566723 DCDC2CA8MYV0 355 aa17.86■□□□□ 0.45
SMPD3-208ENST00000566723 ZNF213O14771 459 aa17.86■□□□□ 0.45
SMPD3-208ENST00000566723 CTAGE5O15320 804 aa17.86■□□□□ 0.45
SMPD3-208ENST00000566723 RAG1P15918 1043 aa17.86■□□□□ 0.45
SMPD3-208ENST00000566723 FAM109BQ6ICB4 259 aaPredicted RBP17.86■□□□□ 0.45
SMPD3-208ENST00000566723 TLK2Q86UE8 772 aa17.86■□□□□ 0.45
SMPD3-208ENST00000566723 TMEM39AQ9NV64 488 aa17.86■□□□□ 0.45
SMPD3-208ENST00000566723 PNMA2Q9UL42 364 aa17.86■□□□□ 0.45
SMPD3-208ENST00000566723 DDX49Q9Y6V7 483 aaKnown RBP17.86■□□□□ 0.45
SMPD3-208ENST00000566723 A0A0U1RQG5 324 aaPredicted RBP17.85■□□□□ 0.45
SMPD3-208ENST00000566723 NFIBO00712 420 aa17.85■□□□□ 0.45
SMPD3-208ENST00000566723 NOL8Q76FK4 1167 aaKnown RBP17.85■□□□□ 0.45
SMPD3-208ENST00000566723 FBXO16Q8IX29 292 aaPredicted RBP17.85■□□□□ 0.45
SMPD3-208ENST00000566723 DSCC1Q9BVC3 393 aa17.85■□□□□ 0.45
SMPD3-208ENST00000566723 VTA1Q9NP79 307 aa17.85■□□□□ 0.45
SMPD3-208ENST00000566723 GNEQ9Y223 722 aaKnown RBP17.85■□□□□ 0.45
SMPD3-208ENST00000566723 STXBP5LQ9Y2K9 1186 aa17.85■□□□□ 0.45
SMPD3-208ENST00000566723 CDH23Q9H251 3354 aa17.85■□□□□ 0.45
SMPD3-208ENST00000566723 WDR19Q8NEZ3 1342 aa17.84■□□□□ 0.45
SMPD3-208ENST00000566723 CDK7P50613 346 aa17.84■□□□□ 0.45
SMPD3-208ENST00000566723 FPGSQ05932 587 aa17.84■□□□□ 0.45
SMPD3-208ENST00000566723 BAATQ14032 418 aaPredicted RBP17.84■□□□□ 0.45
SMPD3-208ENST00000566723 GPATCH4Q5T3I0 446 aaKnown RBP17.84■□□□□ 0.45
SMPD3-208ENST00000566723 IQCA1Q86XH1 822 aa17.84■□□□□ 0.45
SMPD3-208ENST00000566723 DGKHQ86XP1 1220 aa17.84■□□□□ 0.45
SMPD3-208ENST00000566723 MORC4Q8TE76 937 aa17.84■□□□□ 0.45
SMPD3-208ENST00000566723 VTI1AQ96AJ9 217 aa17.84■□□□□ 0.45
SMPD3-208ENST00000566723 PURBQ96QR8 312 aaKnown RBP17.84■□□□□ 0.45
SMPD3-208ENST00000566723 ZKSCAN3Q9BRR0 538 aa17.84■□□□□ 0.45
SMPD3-208ENST00000566723 ADD3Q9UEY8 706 aaKnown RBP17.84■□□□□ 0.45
SMPD3-208ENST00000566723 TBX21Q9UL17 535 aa17.84■□□□□ 0.45
SMPD3-208ENST00000566723 A0A0C4DFX4 3053 aa17.83■□□□□ 0.45
SMPD3-208ENST00000566723 LOC102724159A0A0B4J2E5 919 aa17.83■□□□□ 0.44
SMPD3-208ENST00000566723 PTPDC1A2A3K4 754 aa17.83■□□□□ 0.44
SMPD3-208ENST00000566723 ARVCFO00192 962 aa17.83■□□□□ 0.44
SMPD3-208ENST00000566723 KDM4AO75164 1064 aa17.83■□□□□ 0.44
SMPD3-208ENST00000566723 SMPD1P17405 629 aa17.83■□□□□ 0.44
SMPD3-208ENST00000566723 ALDH5A1P51649 535 aaPredicted RBP17.83■□□□□ 0.44
SMPD3-208ENST00000566723 BEX3Q00994 111 aa17.83■□□□□ 0.44
SMPD3-208ENST00000566723 PWP2Q15269 919 aaKnown RBP17.83■□□□□ 0.44
SMPD3-208ENST00000566723 CCDC178Q5BJE1 867 aa17.83■□□□□ 0.44
SMPD3-208ENST00000566723 TAPT1Q6NXT6 567 aa17.83■□□□□ 0.44
SMPD3-208ENST00000566723 SLC30A10Q6XR72 485 aa17.83■□□□□ 0.44
SMPD3-208ENST00000566723 EEPD1Q7L9B9 569 aa17.83■□□□□ 0.44
SMPD3-208ENST00000566723 CLEC4DQ8WXI8 215 aa17.83■□□□□ 0.44
SMPD3-208ENST00000566723 PDGFCQ9NRA1 345 aa17.83■□□□□ 0.44
SMPD3-208ENST00000566723 B4E1Z4 1266 aa17.82■□□□□ 0.44
SMPD3-208ENST00000566723 EPHB4P54760 987 aa17.82■□□□□ 0.44
SMPD3-208ENST00000566723 FSCN1Q16658 493 aaKnown RBP17.82■□□□□ 0.44
SMPD3-208ENST00000566723 IMMTQ16891 758 aaKnown RBP17.82■□□□□ 0.44
SMPD3-208ENST00000566723 ZNF697Q5TEC3 545 aa17.82■□□□□ 0.44
SMPD3-208ENST00000566723 IQSEC1Q6DN90 963 aa17.82■□□□□ 0.44
SMPD3-208ENST00000566723 PNMA1Q8ND90 353 aa17.82■□□□□ 0.44
SMPD3-208ENST00000566723 RNPC3Q96LT9 517 aaKnown RBP17.82■□□□□ 0.44
SMPD3-208ENST00000566723 AP5M1Q9H0R1 490 aa17.82■□□□□ 0.44
SMPD3-208ENST00000566723 Q9Y3F1 56 aa17.82■□□□□ 0.44
SMPD3-208ENST00000566723 SUPT16HQ9Y5B9 1047 aaKnown RBP17.82■□□□□ 0.44
SMPD3-208ENST00000566723 EYSQ5T1H1 3165 aa17.82■□□□□ 0.44
SMPD3-208ENST00000566723 KIAA1217Q5T5P2 1943 aa17.82■□□□□ 0.44
SMPD3-208ENST00000566723 UNC80Q8N2C7 3258 aa17.81■□□□□ 0.44
SMPD3-208ENST00000566723 CABYRO75952 493 aa17.81■□□□□ 0.44
SMPD3-208ENST00000566723 TIMP1P01033 207 aa17.81■□□□□ 0.44
SMPD3-208ENST00000566723 GOLGA8HP0CJ92 632 aa17.81■□□□□ 0.44
SMPD3-208ENST00000566723 PTGS1P23219 599 aa17.81■□□□□ 0.44
SMPD3-208ENST00000566723 SMAD3P84022 425 aaKnown RBP17.81■□□□□ 0.44
SMPD3-208ENST00000566723 CXCL17Q6UXB2 119 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms