RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 MORC4Q8TE76 937 aa17.69■□□□□ 0.42
RNF40-209ENST00000566703 FAM227BQ96M60 508 aa17.69■□□□□ 0.42
RNF40-209ENST00000566703 SEZ6LQ9BYH1 1024 aa17.69■□□□□ 0.42
RNF40-209ENST00000566703 CCPG1Q9ULG6 757 aa17.69■□□□□ 0.42
RNF40-209ENST00000566703 GNEQ9Y223 722 aaKnown RBP17.69■□□□□ 0.42
RNF40-209ENST00000566703 A0A0D9SFI3 127 aa17.68■□□□□ 0.42
RNF40-209ENST00000566703 TLR3O15455 904 aaKnown RBP17.68■□□□□ 0.42
RNF40-209ENST00000566703 MFAP1P55081 439 aaKnown RBP17.68■□□□□ 0.42
RNF40-209ENST00000566703 IRX5P78411 483 aaPredicted RBP17.68■□□□□ 0.42
RNF40-209ENST00000566703 CCDC96Q2M329 555 aa17.68■□□□□ 0.42
RNF40-209ENST00000566703 MFSD5Q6N075 450 aa17.68■□□□□ 0.42
RNF40-209ENST00000566703 SMC5Q8IY18 1101 aa17.68■□□□□ 0.42
RNF40-209ENST00000566703 CHMP4CQ96CF2 233 aa17.68■□□□□ 0.42
RNF40-209ENST00000566703 RNPC3Q96LT9 517 aaKnown RBP17.68■□□□□ 0.42
RNF40-209ENST00000566703 TMEM47Q9BQJ4 181 aa17.68■□□□□ 0.42
RNF40-209ENST00000566703 AP5M1Q9H0R1 490 aa17.68■□□□□ 0.42
RNF40-209ENST00000566703 RWDD1Q9H446 243 aaPredicted RBP17.68■□□□□ 0.42
RNF40-209ENST00000566703 TOMM22Q9NS69 142 aa17.68■□□□□ 0.42
RNF40-209ENST00000566703 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.67■□□□□ 0.42
RNF40-209ENST00000566703 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.67■□□□□ 0.42
RNF40-209ENST00000566703 ZEB2O60315 1214 aa17.67■□□□□ 0.42
RNF40-209ENST00000566703 PPIGQ13427 754 aaKnown RBP eCLIP17.67■□□□□ 0.421e-6■■■□□ 15
RNF40-209ENST00000566703 MUM1L1Q5H9M0 696 aa17.67■□□□□ 0.42
RNF40-209ENST00000566703 RRP12Q5JTH9 1297 aaKnown RBP17.67■□□□□ 0.42
RNF40-209ENST00000566703 SYDE2Q5VT97 1194 aa17.67■□□□□ 0.42
RNF40-209ENST00000566703 TTBK2Q6IQ55 1244 aa17.67■□□□□ 0.42
RNF40-209ENST00000566703 NOL8Q76FK4 1167 aaKnown RBP17.67■□□□□ 0.42
RNF40-209ENST00000566703 SLC43A3Q8NBI5 491 aa17.67■□□□□ 0.42
RNF40-209ENST00000566703 FAM161BQ96MY7 647 aa17.67■□□□□ 0.42
RNF40-209ENST00000566703 CDX2Q99626 313 aaPredicted RBP17.67■□□□□ 0.42
RNF40-209ENST00000566703 LNPKQ9C0E8 428 aa17.67■□□□□ 0.42
RNF40-209ENST00000566703 ADD3Q9UEY8 706 aaKnown RBP17.67■□□□□ 0.42
RNF40-209ENST00000566703 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.66■□□□□ 0.42
RNF40-209ENST00000566703 TRIM6-TRIM34B2RNG4 842 aa17.66■□□□□ 0.42
RNF40-209ENST00000566703 SNAP25P60880 206 aa17.66■□□□□ 0.42
RNF40-209ENST00000566703 NMIQ13287 307 aaPredicted RBP17.66■□□□□ 0.42
RNF40-209ENST00000566703 AKNAD1Q5T1N1 836 aa17.66■□□□□ 0.42
RNF40-209ENST00000566703 TAPT1Q6NXT6 567 aa17.66■□□□□ 0.42
RNF40-209ENST00000566703 NSMFQ6X4W1 530 aa17.66■□□□□ 0.42
RNF40-209ENST00000566703 MFSD6Q6ZSS7 791 aa17.66■□□□□ 0.42
RNF40-209ENST00000566703 FAM126BQ8IXS8 530 aa17.66■□□□□ 0.42
RNF40-209ENST00000566703 OSBPL3Q9H4L5 887 aa17.66■□□□□ 0.42
RNF40-209ENST00000566703 RNF41Q9H4P4 317 aaPredicted RBP17.66■□□□□ 0.42
RNF40-209ENST00000566703 VTA1Q9NP79 307 aa17.66■□□□□ 0.42
RNF40-209ENST00000566703 MTMR7Q9Y216 660 aa17.66■□□□□ 0.42
RNF40-209ENST00000566703 ASTN1O14525 1302 aa17.66■□□□□ 0.42
RNF40-209ENST00000566703 CCDC171Q6TFL3 1326 aa17.66■□□□□ 0.42
RNF40-209ENST00000566703 LAMA3Q16787 3333 aa17.65■□□□□ 0.42
RNF40-209ENST00000566703 DYNC1LI2O43237 492 aaPredicted RBP17.65■□□□□ 0.42
RNF40-209ENST00000566703 CD4P01730 458 aa17.65■□□□□ 0.42
RNF40-209ENST00000566703 SMPD1P17405 629 aa17.65■□□□□ 0.42
RNF40-209ENST00000566703 SDSP20132 328 aa17.65■□□□□ 0.42
RNF40-209ENST00000566703 SLC16A2P36021 539 aa17.65■□□□□ 0.42
RNF40-209ENST00000566703 TLK2Q86UE8 772 aa17.65■□□□□ 0.42
RNF40-209ENST00000566703 ZNF589Q86UQ0 364 aaPredicted RBP17.65■□□□□ 0.42
RNF40-209ENST00000566703 TMEM199Q8N511 208 aa17.65■□□□□ 0.42
RNF40-209ENST00000566703 RILPL2Q969X0 211 aa17.65■□□□□ 0.42
RNF40-209ENST00000566703 SNHG28P0DPA3 235 aa17.64■□□□□ 0.41
RNF40-209ENST00000566703 PDHBP11177 359 aa17.64■□□□□ 0.41
RNF40-209ENST00000566703 BEX3Q00994 111 aa17.64■□□□□ 0.41
RNF40-209ENST00000566703 BAATQ14032 418 aaPredicted RBP17.64■□□□□ 0.41
RNF40-209ENST00000566703 FSCN1Q16658 493 aaKnown RBP17.64■□□□□ 0.41
RNF40-209ENST00000566703 CCDC178Q5BJE1 867 aa17.64■□□□□ 0.41
RNF40-209ENST00000566703 CXCL17Q6UXB2 119 aa17.64■□□□□ 0.41
RNF40-209ENST00000566703 TTYH1Q9H313 450 aaPredicted RBP17.64■□□□□ 0.41
RNF40-209ENST00000566703 GPCPD1Q9NPB8 672 aa17.64■□□□□ 0.41
RNF40-209ENST00000566703 HAND2P61296 217 aa17.63■□□□□ 0.41
RNF40-209ENST00000566703 ZNF543Q08ER8 600 aa17.63■□□□□ 0.41
RNF40-209ENST00000566703 ITGA7Q13683 1181 aa17.63■□□□□ 0.41
RNF40-209ENST00000566703 KIAA1211Q6ZU35 1233 aa17.63■□□□□ 0.41
RNF40-209ENST00000566703 RASGRP2Q7LDG7 609 aa17.63■□□□□ 0.41
RNF40-209ENST00000566703 CHD1LQ86WJ1 897 aa17.63■□□□□ 0.41
RNF40-209ENST00000566703 DGKHQ86XP1 1220 aa17.63■□□□□ 0.41
RNF40-209ENST00000566703 PLEKHM2Q8IWE5 1019 aa17.63■□□□□ 0.41
RNF40-209ENST00000566703 ESR2Q92731 530 aa17.63■□□□□ 0.41
RNF40-209ENST00000566703 MAF1Q9H063 256 aa17.63■□□□□ 0.41
RNF40-209ENST00000566703 PDGFCQ9NRA1 345 aa17.63■□□□□ 0.41
RNF40-209ENST00000566703 WDR19Q8NEZ3 1342 aa17.63■□□□□ 0.41
RNF40-209ENST00000566703 RBM47A0AV96 593 aaKnown RBP17.62■□□□□ 0.41
RNF40-209ENST00000566703 ZNF213O14771 459 aa17.62■□□□□ 0.41
RNF40-209ENST00000566703 ALDH5A1P51649 535 aaPredicted RBP17.62■□□□□ 0.41
RNF40-209ENST00000566703 NUCB1Q02818 461 aa17.62■□□□□ 0.41
RNF40-209ENST00000566703 DUSP28Q4G0W2 176 aa17.62■□□□□ 0.41
RNF40-209ENST00000566703 TMEM240Q5SV17 173 aa17.62■□□□□ 0.41
RNF40-209ENST00000566703 GPATCH4Q5T3I0 446 aaKnown RBP17.62■□□□□ 0.41
RNF40-209ENST00000566703 RASIP1Q5U651 963 aa17.62■□□□□ 0.41
RNF40-209ENST00000566703 C16orf59Q7L2K0 433 aa17.62■□□□□ 0.41
RNF40-209ENST00000566703 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.62■□□□□ 0.41
RNF40-209ENST00000566703 RGS22Q8NE09 1264 aa17.62■□□□□ 0.41
RNF40-209ENST00000566703 CLEC4DQ8WXI8 215 aa17.62■□□□□ 0.41
RNF40-209ENST00000566703 MPHOSPH6Q99547 160 aaKnown RBP17.62■□□□□ 0.41
RNF40-209ENST00000566703 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.62■□□□□ 0.413e-6■□□□□ 10.1
RNF40-209ENST00000566703 FRMPD2Q68DX3 1309 aaPredicted RBP17.62■□□□□ 0.41
RNF40-209ENST00000566703 HIP1O00291 1037 aa17.61■□□□□ 0.41
RNF40-209ENST00000566703 NFIBO00712 420 aa17.61■□□□□ 0.41
RNF40-209ENST00000566703 PSRC1Q6PGN9 363 aaPredicted RBP17.61■□□□□ 0.41
RNF40-209ENST00000566703 EEPD1Q7L9B9 569 aa17.61■□□□□ 0.41
RNF40-209ENST00000566703 FBXO16Q8IX29 292 aaPredicted RBP17.61■□□□□ 0.41
RNF40-209ENST00000566703 ANKS1AQ92625 1134 aa17.61■□□□□ 0.41
RNF40-209ENST00000566703 PURBQ96QR8 312 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms